RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 PPCDCQ96CD2 204 aa25.96■■□□□ 1.75
SMARCC1-203ENST00000454240 MAELQ96JY0 434 aaKnown RBP25.96■■□□□ 1.75
SMARCC1-203ENST00000454240 OR10A5Q9H207 317 aa25.96■■□□□ 1.75
SMARCC1-203ENST00000454240 WDR55Q9H6Y2 383 aaPredicted RBP25.96■■□□□ 1.75
SMARCC1-203ENST00000454240 ATP6V1HQ9UI12 483 aa25.96■■□□□ 1.75
SMARCC1-203ENST00000454240 YARS2Q9Y2Z4 477 aaKnown RBP25.96■■□□□ 1.75
SMARCC1-203ENST00000454240 SORBS2O94875 1100 aaKnown RBP25.95■■□□□ 1.74
SMARCC1-203ENST00000454240 EPHA3P29320 983 aa25.95■■□□□ 1.74
SMARCC1-203ENST00000454240 CD96P40200 585 aa25.95■■□□□ 1.74
SMARCC1-203ENST00000454240 ST13P50502 369 aaKnown RBP25.95■■□□□ 1.74
SMARCC1-203ENST00000454240 DIO3P55073 304 aa25.95■■□□□ 1.74
SMARCC1-203ENST00000454240 TRMT12Q53H54 448 aaKnown RBP25.95■■□□□ 1.74
SMARCC1-203ENST00000454240 ZNF468Q5VIY5 522 aaPredicted RBP25.95■■□□□ 1.74
SMARCC1-203ENST00000454240 OR9A2Q8NGT5 310 aa25.95■■□□□ 1.74
SMARCC1-203ENST00000454240 UTP23Q9BRU9 249 aaKnown RBP25.95■■□□□ 1.74
SMARCC1-203ENST00000454240 GLIPR2Q9H4G4 154 aa25.95■■□□□ 1.74
SMARCC1-203ENST00000454240 TRIM45Q9H8W5 580 aaPredicted RBP25.95■■□□□ 1.74
SMARCC1-203ENST00000454240 SLAMF7Q9NQ25 335 aa25.95■■□□□ 1.74
SMARCC1-203ENST00000454240 SH3BP4Q9P0V3 963 aa25.95■■□□□ 1.74
SMARCC1-203ENST00000454240 WWP2O00308 870 aa25.94■■□□□ 1.74
SMARCC1-203ENST00000454240 SCAMP2O15127 329 aaKnown RBP25.94■■□□□ 1.74
SMARCC1-203ENST00000454240 OR2J2O76002 312 aa25.94■■□□□ 1.74
SMARCC1-203ENST00000454240 PCSK2P16519 638 aa25.94■■□□□ 1.74
SMARCC1-203ENST00000454240 NTSP30990 170 aa25.94■■□□□ 1.74
SMARCC1-203ENST00000454240 HPCAL1P37235 193 aa25.94■■□□□ 1.74
SMARCC1-203ENST00000454240 RPL3P39023 403 aaKnown RBP25.94■■□□□ 1.74
SMARCC1-203ENST00000454240 CASRP41180 1078 aa25.94■■□□□ 1.74
SMARCC1-203ENST00000454240 CLDN8P56748 225 aa25.94■■□□□ 1.74
SMARCC1-203ENST00000454240 C21orf58P58505 322 aa25.94■■□□□ 1.74
SMARCC1-203ENST00000454240 MRPS35P82673 323 aaKnown RBP25.94■■□□□ 1.74
SMARCC1-203ENST00000454240 ZNF169Q14929 603 aaPredicted RBP25.94■■□□□ 1.74
SMARCC1-203ENST00000454240 EBPQ15125 230 aaKnown RBP25.94■■□□□ 1.74
SMARCC1-203ENST00000454240 SLC29A4Q7RTT9 530 aa25.94■■□□□ 1.74
SMARCC1-203ENST00000454240 RIMKLAQ8IXN7 391 aa25.94■■□□□ 1.74
SMARCC1-203ENST00000454240 FAM9CQ8IZT9 166 aa25.94■■□□□ 1.74
SMARCC1-203ENST00000454240 ERP27Q96DN0 273 aa25.94■■□□□ 1.74
SMARCC1-203ENST00000454240 AMDHD1Q96NU7 426 aa25.94■■□□□ 1.74
SMARCC1-203ENST00000454240 WWTR1Q9GZV5 400 aa25.94■■□□□ 1.74
SMARCC1-203ENST00000454240 ANKRD10Q9NXR5 420 aa25.94■■□□□ 1.74
SMARCC1-203ENST00000454240 HEMK1Q9Y5R4 338 aaPredicted RBP25.94■■□□□ 1.74
SMARCC1-203ENST00000454240 USH1CQ9Y6N9 552 aa25.94■■□□□ 1.74
SMARCC1-203ENST00000454240 GOLGA8QA0A0J9YX86 632 aa25.93■■□□□ 1.74
SMARCC1-203ENST00000454240 GOLGA8OA6NCC3 632 aa25.93■■□□□ 1.74
SMARCC1-203ENST00000454240 GOLGA8NF8WBI6 632 aa25.93■■□□□ 1.74
SMARCC1-203ENST00000454240 CBX7O95931 251 aa25.93■■□□□ 1.74
SMARCC1-203ENST00000454240 PRPS1L1P21108 318 aa25.93■■□□□ 1.74
SMARCC1-203ENST00000454240 FRKP42685 505 aaPredicted RBP25.93■■□□□ 1.74
SMARCC1-203ENST00000454240 HLCSP50747 726 aa25.93■■□□□ 1.74
SMARCC1-203ENST00000454240 NCBP2P52298 156 aaKnown RBP eCLIP25.93■■□□□ 1.749e-26■■□□□ 13.3
SMARCC1-203ENST00000454240 DUSP8Q13202 625 aa25.93■■□□□ 1.74
SMARCC1-203ENST00000454240 SLC9B1Q4ZJI4 515 aa25.93■■□□□ 1.74
SMARCC1-203ENST00000454240 KRTCAP2Q8N6L1 136 aa25.93■■□□□ 1.74
SMARCC1-203ENST00000454240 SIMC1Q8NDZ2 872 aa25.93■■□□□ 1.74
SMARCC1-203ENST00000454240 KAT2AQ92830 837 aa25.93■■□□□ 1.74
SMARCC1-203ENST00000454240 CIDECQ96AQ7 238 aaPredicted RBP25.93■■□□□ 1.74
SMARCC1-203ENST00000454240 SIGLEC12Q96PQ1 595 aa25.93■■□□□ 1.74
SMARCC1-203ENST00000454240 RASL10BQ96S79 203 aa25.93■■□□□ 1.74
SMARCC1-203ENST00000454240 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP25.93■■□□□ 1.74
SMARCC1-203ENST00000454240 TRAV17A0A0B4J275 112 aa25.92■■□□□ 1.74
SMARCC1-203ENST00000454240 PDPK1O15530 556 aa25.92■■□□□ 1.74
SMARCC1-203ENST00000454240 ALDOCP09972 364 aaKnown RBP25.92■■□□□ 1.74
SMARCC1-203ENST00000454240 DDX5P17844 614 aaKnown RBP25.92■■□□□ 1.74
SMARCC1-203ENST00000454240 SSR4P51571 173 aa25.92■■□□□ 1.74
SMARCC1-203ENST00000454240 EXOSC7Q15024 291 aaKnown RBP25.92■■□□□ 1.74
SMARCC1-203ENST00000454240 PIGGQ5H8A4 983 aa25.92■■□□□ 1.74
SMARCC1-203ENST00000454240 SPATA19Q7Z5L4 167 aa25.92■■□□□ 1.74
SMARCC1-203ENST00000454240 MDS2Q8NDY4 140 aa25.92■■□□□ 1.74
SMARCC1-203ENST00000454240 OR7A2PQ8NGA2 310 aa25.92■■□□□ 1.74
SMARCC1-203ENST00000454240 C16orf52Q8NHV5 167 aa25.92■■□□□ 1.74
SMARCC1-203ENST00000454240 ACTRT2Q8TDY3 377 aa25.92■■□□□ 1.74
SMARCC1-203ENST00000454240 LUZP4Q9P127 313 aa25.92■■□□□ 1.74
SMARCC1-203ENST00000454240 DYNC1I1O14576 645 aa25.91■■□□□ 1.74
SMARCC1-203ENST00000454240 PLOD3O60568 738 aa25.91■■□□□ 1.74
SMARCC1-203ENST00000454240 ZNF354AO60765 605 aaPredicted RBP25.91■■□□□ 1.74
SMARCC1-203ENST00000454240 BCAS2O75934 225 aaPredicted RBP25.91■■□□□ 1.74
SMARCC1-203ENST00000454240 NEURL1O76050 574 aa25.91■■□□□ 1.74
SMARCC1-203ENST00000454240 SLITRK5O94991 958 aa25.91■■□□□ 1.74
SMARCC1-203ENST00000454240 TGDSO95455 350 aa25.91■■□□□ 1.74
SMARCC1-203ENST00000454240 CYB561P49447 251 aa25.91■■□□□ 1.74
SMARCC1-203ENST00000454240 OC90Q02509 493 aaPredicted RBP25.91■■□□□ 1.74
SMARCC1-203ENST00000454240 OR1C1Q15619 314 aa25.91■■□□□ 1.74
SMARCC1-203ENST00000454240 FHL5Q5TD97 284 aa25.91■■□□□ 1.74
SMARCC1-203ENST00000454240 EPGNQ6UW88 154 aa25.91■■□□□ 1.74
SMARCC1-203ENST00000454240 FAM47EQ6ZV65 393 aa25.91■■□□□ 1.74
SMARCC1-203ENST00000454240 ZNF227Q86WZ6 799 aa25.91■■□□□ 1.74
SMARCC1-203ENST00000454240 TMEM156Q8N614 296 aa25.91■■□□□ 1.74
SMARCC1-203ENST00000454240 ZNF441Q8N8Z8 693 aa25.91■■□□□ 1.74
SMARCC1-203ENST00000454240 OR7G2Q8NG99 324 aa25.91■■□□□ 1.74
SMARCC1-203ENST00000454240 OR52R1Q8NGF1 315 aa25.91■■□□□ 1.74
SMARCC1-203ENST00000454240 NUDT8Q8WV74 236 aa25.91■■□□□ 1.74
SMARCC1-203ENST00000454240 ADIPOR1Q96A54 375 aa25.91■■□□□ 1.74
SMARCC1-203ENST00000454240 COQ8BQ96D53 544 aa25.91■■□□□ 1.74
SMARCC1-203ENST00000454240 ACSS1Q9NUB1 689 aaPredicted RBP25.91■■□□□ 1.74
SMARCC1-203ENST00000454240 LRFN1Q9P244 771 aa25.91■■□□□ 1.74
SMARCC1-203ENST00000454240 BCAP29Q9UHQ4 241 aa25.91■■□□□ 1.74
SMARCC1-203ENST00000454240 MAPRE3Q9UPY8 281 aa25.91■■□□□ 1.74
SMARCC1-203ENST00000454240 CFL2Q9Y281 166 aa25.91■■□□□ 1.74
SMARCC1-203ENST00000454240 PCDHGA10Q9Y5H3 936 aa25.91■■□□□ 1.74
SMARCC1-203ENST00000454240 C2orf92A0A1B0GVN3 265 aa25.9■■□□□ 1.74
SMARCC1-203ENST00000454240 PLOD2O00469 737 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms