RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 PAPD4Q6PIY7 484 aaKnown RBP14.58□□□□□ -0.08
VCX3B-204ENST00000453306 ZNF551Q7Z340 670 aaPredicted RBP14.58□□□□□ -0.08
VCX3B-204ENST00000453306 CPLX4Q7Z7G2 160 aa14.58□□□□□ -0.08
VCX3B-204ENST00000453306 ST13P4Q8IZP2 240 aaPredicted RBP14.58□□□□□ -0.08
VCX3B-204ENST00000453306 CPSF7Q8N684 471 aaKnown RBP14.58□□□□□ -0.08
VCX3B-204ENST00000453306 CLEC1AQ8NC01 280 aa14.58□□□□□ -0.08
VCX3B-204ENST00000453306 OR9A2Q8NGT5 310 aa14.58□□□□□ -0.08
VCX3B-204ENST00000453306 METTL21AQ8WXB1 218 aa14.58□□□□□ -0.08
VCX3B-204ENST00000453306 NACC2Q96BF6 587 aa14.58□□□□□ -0.08
VCX3B-204ENST00000453306 TESCQ96BS2 214 aa14.58□□□□□ -0.08
VCX3B-204ENST00000453306 MTERF3Q96E29 417 aa14.58□□□□□ -0.08
VCX3B-204ENST00000453306 AMDHD1Q96NU7 426 aa14.58□□□□□ -0.08
VCX3B-204ENST00000453306 MFRPQ9BY79 579 aa14.58□□□□□ -0.08
VCX3B-204ENST00000453306 CXorf21Q9HAI6 301 aa14.58□□□□□ -0.08
VCX3B-204ENST00000453306 ZNF160Q9HCG1 818 aa14.58□□□□□ -0.08
VCX3B-204ENST00000453306 MIEF1Q9NQG6 463 aa14.58□□□□□ -0.08
VCX3B-204ENST00000453306 ASPDHA6ND91 283 aa14.57□□□□□ -0.08
VCX3B-204ENST00000453306 SLC22A3O75751 556 aa14.57□□□□□ -0.08
VCX3B-204ENST00000453306 IFNA16P05015 189 aa14.57□□□□□ -0.08
VCX3B-204ENST00000453306 ATP1B1P05026 303 aa14.57□□□□□ -0.08
VCX3B-204ENST00000453306 COX7A2P14406 83 aa14.57□□□□□ -0.08
VCX3B-204ENST00000453306 CSNK2A2P19784 350 aaPredicted RBP14.57□□□□□ -0.08
VCX3B-204ENST00000453306 NCF2P19878 526 aaPredicted RBP14.57□□□□□ -0.08
VCX3B-204ENST00000453306 ATP4BP51164 291 aa14.57□□□□□ -0.08
VCX3B-204ENST00000453306 SLC26A5P58743 744 aa14.57□□□□□ -0.08
VCX3B-204ENST00000453306 PRICKLE4Q2TBC4 344 aa14.57□□□□□ -0.08
VCX3B-204ENST00000453306 PGS1Q32NB8 556 aa14.57□□□□□ -0.08
VCX3B-204ENST00000453306 TRMT12Q53H54 448 aaKnown RBP14.57□□□□□ -0.08
VCX3B-204ENST00000453306 CPTPQ5TA50 214 aa14.57□□□□□ -0.08
VCX3B-204ENST00000453306 METTL21CQ5VZV1 264 aa14.57□□□□□ -0.08
VCX3B-204ENST00000453306 NDUFAF7Q7L592 441 aa14.57□□□□□ -0.08
VCX3B-204ENST00000453306 KIF2BQ8N4N8 673 aa14.57□□□□□ -0.08
VCX3B-204ENST00000453306 ZNF721Q8TF20 911 aa14.57□□□□□ -0.08
VCX3B-204ENST00000453306 TM9SF4Q92544 642 aa14.57□□□□□ -0.08
VCX3B-204ENST00000453306 CTHRC1Q96CG8 243 aa14.57□□□□□ -0.08
VCX3B-204ENST00000453306 SENP5Q96HI0 755 aaPredicted RBP14.57□□□□□ -0.08
VCX3B-204ENST00000453306 NMUR2Q9GZQ4 415 aa14.57□□□□□ -0.08
VCX3B-204ENST00000453306 ADAP2Q9NPF8 381 aa14.57□□□□□ -0.08
VCX3B-204ENST00000453306 MAT2BQ9NZL9 334 aa14.57□□□□□ -0.08
VCX3B-204ENST00000453306 ZIM2Q9NZV7 527 aa14.57□□□□□ -0.08
VCX3B-204ENST00000453306 ZNF639Q9UID6 485 aa14.57□□□□□ -0.08
VCX3B-204ENST00000453306 PSME2Q9UL46 239 aa14.57□□□□□ -0.08
VCX3B-204ENST00000453306 PPIEQ9UNP9 301 aaKnown RBP14.57□□□□□ -0.08
VCX3B-204ENST00000453306 SAGE2PA6NJ88 616 aa14.56□□□□□ -0.08
VCX3B-204ENST00000453306 C17orf105B2RV13 164 aa14.56□□□□□ -0.08
VCX3B-204ENST00000453306 PRKNO60260 465 aaPredicted RBP14.56□□□□□ -0.08
VCX3B-204ENST00000453306 SEMA7AO75326 666 aa14.56□□□□□ -0.08
VCX3B-204ENST00000453306 HPP00738 406 aa14.56□□□□□ -0.08
VCX3B-204ENST00000453306 IGKV3-11P04433 115 aa14.56□□□□□ -0.08
VCX3B-204ENST00000453306 HPCAL1P37235 193 aa14.56□□□□□ -0.08
VCX3B-204ENST00000453306 CDK9P50750 372 aaKnown RBP14.56□□□□□ -0.08
VCX3B-204ENST00000453306 ELAVL1Q15717 326 aaKnown RBP14.56□□□□□ -0.08
VCX3B-204ENST00000453306 FAM174BQ3ZCQ3 159 aa14.56□□□□□ -0.08
VCX3B-204ENST00000453306 ZNF628Q5EBL2 1059 aa14.56□□□□□ -0.08
VCX3B-204ENST00000453306 DCAF10Q5QP82 559 aa14.56□□□□□ -0.08
VCX3B-204ENST00000453306 CLECL1Q8IZS7 167 aa14.56□□□□□ -0.08
VCX3B-204ENST00000453306 MIER2Q8N344 545 aa14.56□□□□□ -0.08
VCX3B-204ENST00000453306 RBMXL3Q8N7X1 1067 aaKnown RBP14.56□□□□□ -0.08
VCX3B-204ENST00000453306 Q8NA96 180 aa14.56□□□□□ -0.08
VCX3B-204ENST00000453306 APCDD1LQ8NCL9 501 aa14.56□□□□□ -0.08
VCX3B-204ENST00000453306 OR8J2Q8NGG1 315 aa14.56□□□□□ -0.08
VCX3B-204ENST00000453306 PRR7Q8TB68 274 aa14.56□□□□□ -0.08
VCX3B-204ENST00000453306 PSMF1Q92530 271 aa14.56□□□□□ -0.08
VCX3B-204ENST00000453306 KAT2AQ92830 837 aa14.56□□□□□ -0.08
VCX3B-204ENST00000453306 DGAT2Q96PD7 388 aa14.56□□□□□ -0.08
VCX3B-204ENST00000453306 SIRT3Q9NTG7 399 aaPredicted RBP14.56□□□□□ -0.08
VCX3B-204ENST00000453306 LUZP4Q9P127 313 aa14.56□□□□□ -0.08
VCX3B-204ENST00000453306 B3GNT3Q9Y2A9 372 aa14.56□□□□□ -0.08
VCX3B-204ENST00000453306 ZNF780BQ9Y6R6 833 aa14.56□□□□□ -0.08
VCX3B-204ENST00000453306 CREBBPQ92793 2442 aa14.56□□□□□ -0.08
VCX3B-204ENST00000453306 RP1L1Q8IWN7 2480 aaPredicted RBP14.56□□□□□ -0.08
VCX3B-204ENST00000453306 TNRC6AQ8NDV7 1962 aaKnown RBP14.56□□□□□ -0.08
VCX3B-204ENST00000453306 UNC79Q9P2D8 2635 aa14.55□□□□□ -0.08
VCX3B-204ENST00000453306 TMEM200CA6NKL6 621 aa14.55□□□□□ -0.08
VCX3B-204ENST00000453306 OR10H2O60403 315 aa14.55□□□□□ -0.08
VCX3B-204ENST00000453306 CBX7O95931 251 aa14.55□□□□□ -0.08
VCX3B-204ENST00000453306 FAM107AO95990 144 aa14.55□□□□□ -0.08
VCX3B-204ENST00000453306 PCSK2P16519 638 aa14.55□□□□□ -0.08
VCX3B-204ENST00000453306 TNNI3P19429 210 aa14.55□□□□□ -0.08
VCX3B-204ENST00000453306 CAPN3P20807 821 aa14.55□□□□□ -0.08
VCX3B-204ENST00000453306 NT5EP21589 574 aa14.55□□□□□ -0.08
VCX3B-204ENST00000453306 SSTR4P31391 388 aa14.55□□□□□ -0.08
VCX3B-204ENST00000453306 GALNSP34059 522 aa14.55□□□□□ -0.08
VCX3B-204ENST00000453306 NCBP2P52298 156 aaKnown RBP eCLIP14.55□□□□□ -0.08
VCX3B-204ENST00000453306 MRPS35P82673 323 aaKnown RBP14.55□□□□□ -0.08
VCX3B-204ENST00000453306 FUT7Q11130 342 aa14.55□□□□□ -0.08
VCX3B-204ENST00000453306 MAP4K2Q12851 820 aa14.55□□□□□ -0.08
VCX3B-204ENST00000453306 SQLEQ14534 574 aa14.55□□□□□ -0.08
VCX3B-204ENST00000453306 ZNF267Q14586 743 aaPredicted RBP14.55□□□□□ -0.08
VCX3B-204ENST00000453306 RPS6KA2Q15349 733 aa14.55□□□□□ -0.08
VCX3B-204ENST00000453306 TLR1Q15399 786 aa14.55□□□□□ -0.08
VCX3B-204ENST00000453306 SPRED3Q2MJR0 410 aa14.55□□□□□ -0.08
VCX3B-204ENST00000453306 EIF2S3LQ2VIR3 472 aaKnown RBP14.55□□□□□ -0.08
VCX3B-204ENST00000453306 AGKQ53H12 422 aa14.55□□□□□ -0.08
VCX3B-204ENST00000453306 BLOC1S3Q6QNY0 202 aa14.55□□□□□ -0.08
VCX3B-204ENST00000453306 R3HCC1LQ7Z5L2 792 aaKnown RBP14.55□□□□□ -0.08
VCX3B-204ENST00000453306 ANKRD46Q86W74 232 aa14.55□□□□□ -0.08
VCX3B-204ENST00000453306 TREML1Q86YW5 311 aa14.55□□□□□ -0.08
VCX3B-204ENST00000453306 LRRC25Q8N386 305 aaPredicted RBP14.55□□□□□ -0.08
VCX3B-204ENST00000453306 ZNF615Q8N8J6 731 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms