RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 CCDC153Q494R4 210 aa8.92□□□□□ -0.98
USP54-207ENST00000451492 C10orf62Q5T681 223 aaPredicted RBP8.92□□□□□ -0.98
USP54-207ENST00000451492 SLC22A10Q63ZE4 541 aa8.92□□□□□ -0.98
USP54-207ENST00000451492 ACSM2BQ68CK6 577 aa8.92□□□□□ -0.98
USP54-207ENST00000451492 SP5Q6BEB4 398 aaPredicted RBP8.92□□□□□ -0.98
USP54-207ENST00000451492 ZNF585AQ6P3V2 769 aa8.92□□□□□ -0.98
USP54-207ENST00000451492 ARHGAP11AQ6P4F7 1023 aa8.92□□□□□ -0.98
USP54-207ENST00000451492 LYPD8Q6UX82 237 aa8.92□□□□□ -0.98
USP54-207ENST00000451492 RPTNQ6XPR3 784 aa8.92□□□□□ -0.98
USP54-207ENST00000451492 SLC22A16Q86VW1 577 aa8.92□□□□□ -0.98
USP54-207ENST00000451492 TAGAPQ8N103 731 aa8.92□□□□□ -0.98
USP54-207ENST00000451492 SIMC1Q8NDZ2 872 aa8.92□□□□□ -0.98
USP54-207ENST00000451492 C7orf57Q8NEG2 295 aa8.92□□□□□ -0.98
USP54-207ENST00000451492 DIO2Q92813 273 aa8.92□□□□□ -0.98
USP54-207ENST00000451492 ZBTB9Q96C00 473 aa8.92□□□□□ -0.98
USP54-207ENST00000451492 TM4SF18Q96CE8 201 aa8.92□□□□□ -0.98
USP54-207ENST00000451492 FAIM2Q9BWQ8 316 aa8.92□□□□□ -0.98
USP54-207ENST00000451492 IQCGQ9H095 443 aaKnown RBP8.92□□□□□ -0.98
USP54-207ENST00000451492 ANKRA2Q9H9E1 313 aa8.92□□□□□ -0.98
USP54-207ENST00000451492 IL1RL2Q9HB29 575 aa8.92□□□□□ -0.98
USP54-207ENST00000451492 EHD3Q9NZN3 535 aa8.92□□□□□ -0.98
USP54-207ENST00000451492 HEY2Q9UBP5 337 aa8.92□□□□□ -0.98
USP54-207ENST00000451492 UTS2RQ9UKP6 389 aa8.92□□□□□ -0.98
USP54-207ENST00000451492 DLGAP4Q9Y2H0 992 aa8.92□□□□□ -0.98
USP54-207ENST00000451492 STK38LQ9Y2H1 464 aa8.92□□□□□ -0.98
USP54-207ENST00000451492 POLR3HQ9Y535 204 aaPredicted RBP8.92□□□□□ -0.98
USP54-207ENST00000451492 ZNF780BQ9Y6R6 833 aa8.92□□□□□ -0.98
USP54-207ENST00000451492 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.92□□□□□ -0.98
USP54-207ENST00000451492 DNAJC13O75165 2243 aa8.92□□□□□ -0.98
USP54-207ENST00000451492 CCDC151A5D8V7 595 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 FAM90A27PA6NNH2 459 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 PLIN3O60664 434 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 CDH16O75309 829 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 NME6O75414 186 aaPredicted RBP8.91□□□□□ -0.98
USP54-207ENST00000451492 ENO1P06733 434 aaKnown RBP8.91□□□□□ -0.98
USP54-207ENST00000451492 FBXO45P0C2W1 286 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 RFPL3SP0C7P2 107 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 HSD3B1P14060 373 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 PCSK2P16519 638 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 GPX3P22352 226 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 HSD3B2P26439 372 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 GDF1P27539 372 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 TIA1P31483 386 aaKnown RBP eCLIP8.91□□□□□ -0.98
USP54-207ENST00000451492 MAN2A2P49641 1150 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 NRG3P56975 720 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 IFFO1Q0D2I5 559 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 RPS6KA2Q15349 733 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 TOMM20Q15388 145 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 PRICKLE4Q2TBC4 344 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 TRMT12Q53H54 448 aaKnown RBP8.91□□□□□ -0.98
USP54-207ENST00000451492 SPIN4Q56A73 249 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 CLEC6AQ6EIG7 209 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 DESI1Q6ICB0 168 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 PAOXQ6QHF9 649 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 BNC2Q6ZN30 1099 aaPredicted RBP8.91□□□□□ -0.98
USP54-207ENST00000451492 FRMD7Q6ZUT3 714 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 LRRC25Q8N386 305 aaPredicted RBP8.91□□□□□ -0.98
USP54-207ENST00000451492 FBXW8Q8N3Y1 598 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 FAM109AQ8N4B1 249 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 ZNF615Q8N8J6 731 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 OR52R1Q8NGF1 315 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 PAQR8Q8TEZ7 354 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 C16orf78Q8WTQ4 265 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 CHTF18Q8WVB6 975 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 KAT2AQ92830 837 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 SDCCAG3Q96C92 435 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 CCDC126Q96EE4 140 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 CNRIP1Q96F85 164 aaPredicted RBP8.91□□□□□ -0.98
USP54-207ENST00000451492 SGCZQ96LD1 299 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 ZNF597Q96LX8 424 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 SMC6Q96SB8 1091 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 DOHHQ9BU89 302 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 NXF5Q9H1B4 397 aaKnown RBP8.91□□□□□ -0.98
USP54-207ENST00000451492 SLC6A15Q9H2J7 730 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 TNFRSF12AQ9NP84 129 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 PNPLA3Q9NST1 481 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 ALKBH4Q9NXW9 302 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 MAT2BQ9NZL9 334 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 SENP1Q9P0U3 644 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 MCM8Q9UJA3 840 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 CES1P1Q9UKY3 287 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 GRID1Q9ULK0 1009 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 BOKQ9UMX3 212 aaPredicted RBP8.91□□□□□ -0.98
USP54-207ENST00000451492 ENTPD4Q9Y227 616 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 PLLPQ9Y342 182 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 HRH3Q9Y5N1 445 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 NPFFR2Q9Y5X5 522 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 PTGDR2Q9Y5Y4 395 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 CHCHD2Q9Y6H1 151 aaPredicted RBP8.91□□□□□ -0.98
USP54-207ENST00000451492 HCFC1P51610 2035 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 MAST4O15021 2626 aa8.91□□□□□ -0.98
USP54-207ENST00000451492 KIAA1549Q9HCM3 1950 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 C2orf72A6NCS6 295 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 LRRC3CA6NJW4 275 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 E9PLN8 166 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 C19orf84I3L1E1 186 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 ADAM10O14672 748 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 GNB5O14775 395 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 SPAG7O75391 227 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 GLSO94925 669 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms