RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 NCBP2P52298 156 aaKnown RBP eCLIP12.14□□□□□ -0.47
VPS33A-202ENST00000451053 MGAT2Q10469 447 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 AIMP2Q13155 320 aaKnown RBP12.14□□□□□ -0.47
VPS33A-202ENST00000451053 ZNF267Q14586 743 aaPredicted RBP12.14□□□□□ -0.47
VPS33A-202ENST00000451053 EXT1Q16394 746 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 SPRED3Q2MJR0 410 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 PRICKLE4Q2TBC4 344 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 PGS1Q32NB8 556 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 TIGD2Q4W5G0 525 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 SPANXN4Q5MJ08 99 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 ANXA8L1Q5VT79 327 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 BORAQ6PGQ7 559 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 FAM111BQ6SJ93 734 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 APLFQ8IW19 511 aaPredicted RBP12.14□□□□□ -0.47
VPS33A-202ENST00000451053 GALNT12Q8IXK2 581 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 KBTBD2Q8IY47 623 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 APCDD1LQ8NCL9 501 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 MORN4Q8NDC4 146 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 OR8J2Q8NGG1 315 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 DNAJB8Q8NHS0 232 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 M1APQ8TC57 530 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 SLC2A12Q8TD20 617 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 ZNF721Q8TF20 911 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 APOBEC4Q8WW27 367 aaKnown RBP12.14□□□□□ -0.47
VPS33A-202ENST00000451053 DAZLQ92904 295 aaKnown RBP12.14□□□□□ -0.47
VPS33A-202ENST00000451053 COQ8BQ96D53 544 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 SENP5Q96HI0 755 aaPredicted RBP12.14□□□□□ -0.47
VPS33A-202ENST00000451053 THOC3Q96J01 351 aaKnown RBP12.14□□□□□ -0.47
VPS33A-202ENST00000451053 AMDHD1Q96NU7 426 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 NUDT9Q9BW91 350 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 BHLHE41Q9C0J9 482 aaPredicted RBP12.14□□□□□ -0.47
VPS33A-202ENST00000451053 GLIPR2Q9H4G4 154 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 FAM120CQ9NX05 1096 aaKnown RBP12.14□□□□□ -0.47
VPS33A-202ENST00000451053 MAT2BQ9NZL9 334 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 ZNF223Q9UK11 482 aaPredicted RBP12.14□□□□□ -0.47
VPS33A-202ENST00000451053 PPIEQ9UNP9 301 aaKnown RBP12.14□□□□□ -0.47
VPS33A-202ENST00000451053 ERVK-19Q9WJR5 959 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 MAP1BP46821 2468 aaKnown RBP12.14□□□□□ -0.47
VPS33A-202ENST00000451053 PTPRQQ9UMZ3 2332 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 DMXL2Q8TDJ6 3036 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 A6NL46 340 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 MRASO14807 208 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 NPPAP01160 153 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 CLPSP04118 112 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 IGKV3-11P04433 115 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 ITGB2P05107 769 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 SERPINA7P05543 415 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 KRT16P08779 473 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 T-ENOLP0DO92 83 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 CAPN3P20807 821 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 S1PR1P21453 382 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 SSTR4P31391 388 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 MPIP34949 423 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 FRKP42685 505 aaPredicted RBP12.13□□□□□ -0.47
VPS33A-202ENST00000451053 ZFP36L2P47974 494 aaKnown RBP12.13□□□□□ -0.47
VPS33A-202ENST00000451053 WNT3P56703 355 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 PHC1P78364 1004 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 MRPS35P82673 323 aaKnown RBP12.13□□□□□ -0.47
VPS33A-202ENST00000451053 ART3Q13508 389 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 RAPSNQ13702 412 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 VPS26BQ4G0F5 336 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 ZNF628Q5EBL2 1059 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 REP15Q6BDI9 236 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 OR4F3Q6IEY1 312 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 ZNF551Q7Z340 670 aaPredicted RBP12.13□□□□□ -0.47
VPS33A-202ENST00000451053 GALNT16Q8N428 558 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 SIMC1Q8NDZ2 872 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 ZNF675Q8TD23 568 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 ELP5Q8TE02 316 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 KAT2AQ92830 837 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 ROPN1LQ96C74 230 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 RCN3Q96D15 328 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 FBXL20Q96IG2 436 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 ITCHQ96J02 903 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 OR52E6Q96RD3 313 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 DUSP26Q9BV47 211 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 CNPPD1Q9BV87 410 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 C1orf21Q9H246 121 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 MMP25Q9NPA2 562 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 GID8Q9NWU2 228 aa12.13□□□□□ -0.47
VPS33A-202ENST00000451053 TPRP12270 2363 aaKnown RBP12.12□□□□□ -0.47
VPS33A-202ENST00000451053 CELSR3Q9NYQ7 3312 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 TRBV11-1A0A0K0K1C0 115 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 B2RBV5 119 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 AIM2O14862 343 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 DYRK3O43781 588 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 PRKNO60260 465 aaPredicted RBP12.12□□□□□ -0.47
VPS33A-202ENST00000451053 CEACAM4O75871 244 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 ICAM2P13598 275 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 CD1EP15812 388 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 CPA2P48052 419 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 NUDT2P50583 147 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 DGKQP52824 942 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 POLE2P56282 527 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 SOX8P57073 446 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 FUT7Q11130 342 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 MAP4K2Q12851 820 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 HSPB3Q12988 150 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 DUSP8Q13202 625 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 EXOSC7Q15024 291 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms