RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 CLEC9AQ6UXN8 241 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ZNF705AQ6ZN79 300 aaPredicted RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 SV2AQ7L0J3 742 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 SLC16A9Q7RTY1 509 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 SLC43A2Q8N370 569 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ZNF610Q8N9Z0 462 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 FAM156AQ8NDB6 213 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 DBF4BQ8NFT6 615 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 OR4E2Q8NGC2 313 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 OR13C2Q8NGS9 318 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 OR2T4Q8NH00 348 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 RHEBL1Q8TAI7 183 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 SELENOMQ8WWX9 145 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 DDX1Q92499 740 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 TMEM125Q96AQ2 219 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 TRMT2BQ96GJ1 504 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 LIN37Q96GY3 246 aaPredicted RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 ST6GAL2Q96JF0 529 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 PWWP2AQ96N64 755 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 PRRT1Q99946 306 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 HERPUD2Q9BSE4 406 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ULBP1Q9BZM6 244 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 TKTL2Q9H0I9 626 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 POLR2J3Q9H1A7 115 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 C20orf85Q9H1P6 137 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 HIPK2Q9H2X6 1198 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 PDZD7Q9H5P4 517 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 AKTIPQ9H8T0 292 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 IL17RBQ9NRM6 502 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 SPANXA1Q9NS26 97 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 MAN2C1Q9NTJ4 1040 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 CTSFQ9UBX1 484 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ZDHHC2Q9UIJ5 367 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ZNF214Q9UL59 606 aaPredicted RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 CYP8B1Q9UNU6 501 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 TMED3Q9Y3Q3 217 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 GPSM3Q9Y4H4 160 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 PCDHB14Q9Y5E9 798 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 A0A1B0GUL6 1792 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 SCN11AQ9UI33 1791 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 MEIKINA0A087WXM9 373 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 MFSD2BA6NFX1 497 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ZNF729A6NN14 1252 aaPredicted RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 A8MT66 165 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 K7ERU9 68 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 CACNB4O00305 520 aaPredicted RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 UBFD1O14562 309 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 CACNG3O60359 315 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 RPP40O75818 363 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 PRAMEF12O95522 483 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 AIFM1O95831 613 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 CAPNS1P04632 268 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 DCNP07585 359 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 PFKMP08237 780 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ZNF8P17098 575 aaPredicted RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 PFKLP17858 780 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 CNR1P21554 472 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 PTPN3P26045 913 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 MSX2P35548 267 aaPredicted RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 CLCN7P51798 805 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 CRISP1P54107 249 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 GP2P55259 537 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 EIF6P56537 245 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 NDUFA6P56556 154 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 RPS13P62277 151 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 BDH1Q02338 343 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 GPR17Q13304 367 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ERV3-1Q14264 604 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 GRM3Q14832 879 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ARL6IP1Q15041 203 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 TMEM183BQ1AE95 376 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 RNF151Q2KHN1 245 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ZACNQ401N2 412 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 PLK5Q496M5 336 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 FBXO47Q5MNV8 452 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ELFN2Q5R3F8 820 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 TMEM69Q5SWH9 247 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 DCST2Q5T1A1 773 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 HENMT1Q5T8I9 393 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 MED27Q6P2C8 311 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 TSSK4Q6SA08 328 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 CATSPERGQ6ZRH7 1159 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 C1orf186Q6ZWK4 172 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 LRRC70Q7Z2Q7 622 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ADCK2Q7Z695 626 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 RANBP3LQ86VV4 465 aaPredicted RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 APCDD1Q8J025 514 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 PYROXD2Q8N2H3 581 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 AVL9Q8NBF6 648 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 DUSP18Q8NEJ0 188 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 GPRC5AQ8NFJ5 357 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 OR2A12Q8NGT7 310 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 OR2G2Q8NGZ5 317 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 PPP1R13LQ8WUF5 828 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ADIPOR1Q96A54 375 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ZFP3Q96NJ6 502 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 SORT1Q99523 831 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 P2RX7Q99572 595 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 MICU1Q9BPX6 476 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 TCF25Q9BQ70 676 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms