RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 CENPEQ02224 2701 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 PCNX1Q96RV3 2341 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 EML6Q6ZMW3 1958 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 FIGNL2A6NMB9 653 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 IGHG3P01860 377 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 ENO1P06733 434 aaKnown RBP14.06□□□□□ -0.16
CHD3-205ENST00000449744 KRT15P19012 456 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 FEN1P39748 380 aaKnown RBP14.06□□□□□ -0.16
CHD3-205ENST00000449744 RPP38P78345 283 aaKnown RBP14.06□□□□□ -0.16
CHD3-205ENST00000449744 RPS6KA2Q15349 733 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 CDSNQ15517 529 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 NTRK2Q16620 822 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 TBCELQ5QJ74 424 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 ZNF585AQ6P3V2 769 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 TMEM64Q6YI46 380 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 TRILQ7L0X0 811 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 SRRM1Q8IYB3 904 aaKnown RBP14.06□□□□□ -0.16
CHD3-205ENST00000449744 VWA5B2Q8N398 1253 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 CCNYL1Q8N7R7 359 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 ZNF615Q8N8J6 731 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 GBP7Q8N8V2 638 aaPredicted RBP14.06□□□□□ -0.16
CHD3-205ENST00000449744 ZNF441Q8N8Z8 693 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 LRRN4CLQ8ND94 238 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 CHTF18Q8WVB6 975 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 ASB5Q8WWX0 329 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 RND1Q92730 232 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 DIO2Q92813 273 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 SARAFQ96BY9 339 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 DOHHQ9BU89 302 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 ZFP64Q9NPA5 681 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 PFDN4Q9NQP4 134 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 BCAP29Q9UHQ4 241 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 MCM8Q9UJA3 840 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 ACAD8Q9UKU7 415 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 CES1P1Q9UKY3 287 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 HRH3Q9Y5N1 445 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 NPFFR2Q9Y5X5 522 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 LIPGQ9Y5X9 500 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 CHCHD2Q9Y6H1 151 aaPredicted RBP14.06□□□□□ -0.16
CHD3-205ENST00000449744 ITPR2Q14571 2701 aa14.06□□□□□ -0.16
CHD3-205ENST00000449744 TRGV5A0A0B4J1U4 118 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 A0A1B0GVC2 190 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 GNG14A0A1W2PPG7 69 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 A0A1W2PPM1 405 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 AQP7O14520 342 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 PCDH7O60245 1069 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 SUSD5O60279 629 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 HCN1O60741 890 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 ATP1B1P05026 303 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 CELA3AP09093 270 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 MYL2P10916 166 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 PRF1P14222 555 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 CHN1P15882 459 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 SLCO1A2P46721 670 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 ACSM2AQ08AH3 577 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 MAP4K2Q12851 820 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 PRICKLE4Q2TBC4 344 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 SPIN4Q56A73 249 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 WLSQ5T9L3 541 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 FAM219BQ5XKK7 198 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 TMEM198Q66K66 360 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 ACSM2BQ68CK6 577 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 FAM111BQ6SJ93 734 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 ACAD11Q709F0 780 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 GDF7Q7Z4P5 450 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 MMP21Q8N119 569 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 OR5M9Q8NGP3 310 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 MZB1Q8WU39 189 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 ACPTQ9BZG2 426 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 PPCSQ9HAB8 311 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 MID1IP1Q9NPA3 183 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 PNPLA3Q9NST1 481 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 UTS2RQ9UKP6 389 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 CNOT11Q9UKZ1 510 aaKnown RBP14.05□□□□□ -0.16
CHD3-205ENST00000449744 TIMM22Q9Y584 194 aa14.05□□□□□ -0.16
CHD3-205ENST00000449744 SMIM23A6NLE4 172 aa14.04□□□□□ -0.16
CHD3-205ENST00000449744 C19orf84I3L1E1 186 aa14.04□□□□□ -0.16
CHD3-205ENST00000449744 LRATO95237 230 aa14.04□□□□□ -0.16
CHD3-205ENST00000449744 SHBGP04278 402 aa14.04□□□□□ -0.16
CHD3-205ENST00000449744 GPX3P22352 226 aa14.04□□□□□ -0.16
CHD3-205ENST00000449744 CCT5P48643 541 aa14.04□□□□□ -0.16
CHD3-205ENST00000449744 HTR6P50406 440 aa14.04□□□□□ -0.16
CHD3-205ENST00000449744 FBXW4P57775 412 aa14.04□□□□□ -0.16
CHD3-205ENST00000449744 NAA20P61599 178 aa14.04□□□□□ -0.16
CHD3-205ENST00000449744 PMPCAQ10713 525 aa14.04□□□□□ -0.16
CHD3-205ENST00000449744 CCDC153Q494R4 210 aa14.04□□□□□ -0.16
CHD3-205ENST00000449744 EMC4Q5J8M3 183 aa14.04□□□□□ -0.16
CHD3-205ENST00000449744 ZYG11AQ6WRX3 759 aa14.04□□□□□ -0.16
CHD3-205ENST00000449744 LRRC25Q8N386 305 aaPredicted RBP14.04□□□□□ -0.16
CHD3-205ENST00000449744 LIX1Q8N485 282 aa14.04□□□□□ -0.16
CHD3-205ENST00000449744 MARVELD2Q8N4S9 558 aa14.04□□□□□ -0.16
CHD3-205ENST00000449744 CCDC63Q8NA47 563 aa14.04□□□□□ -0.16
CHD3-205ENST00000449744 C17orf47Q8NEP4 570 aa14.04□□□□□ -0.16
CHD3-205ENST00000449744 SPPL2AQ8TCT8 520 aa14.04□□□□□ -0.16
CHD3-205ENST00000449744 ADIPOR1Q96A54 375 aa14.04□□□□□ -0.16
CHD3-205ENST00000449744 ZNF597Q96LX8 424 aa14.04□□□□□ -0.16
CHD3-205ENST00000449744 SECISBP2Q96T21 854 aaKnown RBP14.04□□□□□ -0.16
CHD3-205ENST00000449744 GSTO2Q9H4Y5 243 aa14.04□□□□□ -0.16
CHD3-205ENST00000449744 ZNF703Q9H7S9 590 aaPredicted RBP14.04□□□□□ -0.16
CHD3-205ENST00000449744 QPCTLQ9NXS2 382 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms