RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 LHX3Q9UBR4 397 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 PFDN2Q9UHV9 154 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 SPATA2Q9UM82 520 aa12.8□□□□□ -0.36
SYNGAP1-204ENST00000449372 TCRBV16S1A1N1A0A5B0 115 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 PQLC2LA1A4F0 135 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 OR7A17O14581 309 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 ST8SIA5O15466 376 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 SGCEO43556 437 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 SLC25A14O95258 325 aaPredicted RBP12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 OR56A5P0C7T3 313 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 WDR5P61964 334 aaKnown RBP12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 USP45Q70EL2 814 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 SLC30A8Q8IWU4 369 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 HTATIP2Q9BUP3 242 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 RUVBL1Q9Y265 456 aaKnown RBP12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 FAM74A7A6NL05 159 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 NNMTP40261 264 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 GGTA1PQ4G0N0 100 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 FAM74A3Q4VXF1 159 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 USP39Q53GS9 565 aaKnown RBP12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 CTSL3PQ5NE16 218 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 PSAPL1Q6NUJ1 521 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 HSDL2Q6YN16 418 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 SERPINA9Q86WD7 417 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 OR52N1Q8NH53 320 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 SMIM14Q96QK8 99 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 NSUN3Q9H649 340 aaKnown RBP12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 NT5DC2Q9H857 520 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 SEC14L4Q9UDX3 406 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 ZNF225Q9UK10 706 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 SSR3Q9UNL2 185 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 ZFR2Q9UPR6 939 aaKnown RBP12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 PADI2Q9Y2J8 665 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 SMIM30A4D0T7 59 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 SH3D21A4FU49 640 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 TNFRSF11BO00300 401 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 PDCD5O14737 125 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 SRPRAP08240 638 aaKnown RBP12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 POU2F1P14859 743 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 HK1P19367 917 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 CXCL3P19876 107 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 CRYBB2P43320 205 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 RAB13P51153 203 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 PNLIPRP1P54315 467 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 HMGCS1Q01581 520 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 ACSM2AQ08AH3 577 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 IL18Q14116 193 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 DOC2BQ14184 412 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 SWI5Q1ZZU3 235 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 ACSM2BQ68CK6 577 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 SPPL2AQ8TCT8 520 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 AUTS2Q8WXX7 1259 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 MAPKAP1Q9BPZ7 522 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 CDCA4Q9BXL8 241 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 SLCO1C1Q9NYB5 712 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 FBXL2Q9UKC9 423 aa12.79□□□□□ -0.36
SYNGAP1-204ENST00000449372 DHFRP00374 187 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 SCG5P05408 212 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 PRSS56P0CW18 603 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 PRKAR1BP31321 381 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 AGFG1P52594 562 aaKnown RBP12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 BTG1P62324 171 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 P2RY14Q15391 338 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 RGS7BPQ6MZT1 257 aaPredicted RBP12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 FAHD1Q6P587 224 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 NCEH1Q6PIU2 408 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 OTOP2Q7RTS6 562 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 WFDC5Q8TCV5 224 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 TRIM43Q96BQ3 446 aaPredicted RBP12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 TSSK3Q96PN8 268 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 ACTL8Q9H568 366 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 RERGLQ9H628 205 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 CD93Q9NPY3 652 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 B3GAT2Q9NPZ5 323 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 GSN-AS1Q9NRJ2 163 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 SLC25A37Q9NYZ2 338 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 HECAQ9UBI9 543 aaPredicted RBP12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 PLEKHB1Q9UF11 243 aaPredicted RBP12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 PHF11Q9UIL8 331 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 TEX46H3BTG2 121 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 GATCO43716 136 aaKnown RBP12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 CLTBP09497 229 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 LRRC32Q14392 662 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 CPSF6Q16630 551 aaKnown RBP eCLIP12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 PABPC1L2AQ5JQF8 200 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 NHLRC3Q5JS37 347 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 RNF219Q5W0B1 726 aaPredicted RBP12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 CBLL1Q75N03 491 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 TPD52L3Q96J77 140 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 HSH2DQ96JZ2 352 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 HBEGFQ99075 208 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 DNAJC11Q9NVH1 559 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 COMMD3Q9UBI1 195 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 ZNF451Q9Y4E5 1061 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 GLYATL1P3A0A0U1RQE8 302 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 LOC730098B7Z3J9 87 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 TSPAN3O60637 253 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 CPSF4O95639 269 aaKnown RBP12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 LAG3P18627 525 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 CYP4F8P98187 520 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms