RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 PCDH7O60245 1069 aa12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 ZG16O60844 167 aa12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 ERAL1O75616 437 aaKnown RBP12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 CBX7O95931 251 aa12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 UROSP10746 265 aa12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 PRPH2P23942 346 aa12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 ALDH3A1P30838 453 aa12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 TIA1P31483 386 aaKnown RBP eCLIP12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 ARRB2P32121 409 aa12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 PTGER1P34995 402 aa12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 DEKP35659 375 aaKnown RBP12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 HSF1Q00613 529 aa12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 TRMT12Q53H54 448 aaKnown RBP12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 TNFAIP8L3Q5GJ75 292 aa12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 CFAP157Q5JU67 520 aa12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 FAM180BQ6P0A1 224 aa12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 TMEM64Q6YI46 380 aa12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 RNF165Q6ZSG1 346 aa12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 SLC29A4Q7RTT9 530 aa12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 DOLPP1Q86YN1 238 aa12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 SRRM1Q8IYB3 904 aaKnown RBP12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 GHDCQ8N2G8 530 aa12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 C17orf47Q8NEP4 570 aa12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 FAM76AQ8TAV0 307 aa12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 SPACA9Q96E40 222 aaPredicted RBP12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 FAM111AQ96PZ2 611 aa12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 FAM173AQ9BQD7 235 aa12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 TRMOQ9BU70 441 aa12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 FAIM2Q9BWQ8 316 aa12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 SHCBP1LQ9BZQ2 653 aa12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 TUBB1Q9H4B7 451 aa12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 ZDHHC11Q9H8X9 412 aa12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 DTX4Q9Y2E6 619 aa12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 CHCHD2Q9Y6H1 151 aaPredicted RBP12.97□□□□□ -0.33
RTFDC1-204ENST00000449062 EML6Q6ZMW3 1958 aa12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 TRGV8A0A0C4DH27 118 aa12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 C2orf92A0A1B0GVN3 265 aa12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 GOLGA6L10A6NI86 522 aa12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 G3V3Y1 287 aa12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 SPAG7O75391 227 aa12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 ANXA4P09525 319 aaPredicted RBP12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 NT5EP21589 574 aa12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 PIGAP37287 484 aa12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 ETV4P43268 484 aa12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 PPIAP62937 165 aaKnown RBP12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 BTKQ06187 659 aa12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 ZNF844Q08AG5 666 aa12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 IFFO1Q0D2I5 559 aa12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 NTRK2Q16620 822 aa12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 SLC22A10Q63ZE4 541 aa12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 CLEC6AQ6EIG7 209 aa12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 FAM71E1Q6IPT2 247 aa12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 MAMDC2Q7Z304 686 aaPredicted RBP12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 CCDC116Q8IYX3 515 aa12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 CCDC63Q8NA47 563 aa12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 ADCY4Q8NFM4 1077 aa12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 SLC22A8Q8TCC7 542 aa12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 ZNF675Q8TD23 568 aa12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 TCP10LQ8TDR4 215 aa12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 KLHL29Q96CT2 875 aa12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 METTL2AQ96IZ6 378 aaKnown RBP12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 SACM1LQ9NTJ5 587 aa12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 EHD3Q9NZN3 535 aa12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 MID2Q9UJV3 735 aa12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 TINAGQ9UJW2 476 aa12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 UTS2RQ9UKP6 389 aa12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 CNOT11Q9UKZ1 510 aaKnown RBP12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 WBP11Q9Y2W2 641 aaKnown RBP12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 NINQ8N4C6 2090 aa12.96□□□□□ -0.33
RTFDC1-204ENST00000449062 CROCCQ5TZA2 2017 aa12.96□□□□□ -0.34
RTFDC1-204ENST00000449062 PKDREJQ9NTG1 2253 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 GNG14A0A1W2PPG7 69 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 A1L4Q6 167 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 ANKRD33BA6NCL7 494 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 MYO1GB0I1T2 1018 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 CCL21O00585 134 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 AZIN1O14977 448 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 NPHS1O60500 1241 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 RSL1D1O76021 490 aaKnown RBP12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 IGHG3P01860 377 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 GPX3P22352 226 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 COL8A1P27658 744 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 DNASE1L1P49184 302 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 EMDP50402 254 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 PER3P56645 1201 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 RBPJQ06330 500 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 EXOSC7Q15024 291 aaKnown RBP12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 LTB4RQ15722 352 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 ZNF628Q5EBL2 1059 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 ARL13AQ5H913 290 aaPredicted RBP12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 EMC4Q5J8M3 183 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 SPDYAQ5MJ70 313 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 NOXRED1Q6NXP6 359 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 RGS9BPQ6ZS82 235 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 DND1Q8IYX4 353 aaKnown RBP12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 LRRC25Q8N386 305 aaPredicted RBP12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 VWA5B2Q8N398 1253 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 TMEM251Q8N6I4 163 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 OR10G3Q8NGC4 313 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 OR2T11Q8NH01 316 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms