RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 RAD51AP1Q96B01 352 aa18.04■□□□□ 0.48
SDCBP-204ENST00000447182 QRFPRQ96P65 431 aa18.04■□□□□ 0.48
SDCBP-204ENST00000447182 FNDC11Q9BVV2 318 aa18.04■□□□□ 0.48
SDCBP-204ENST00000447182 ANKRA2Q9H9E1 313 aa18.04■□□□□ 0.48
SDCBP-204ENST00000447182 RANGRFQ9HD47 186 aaPredicted RBP18.04■□□□□ 0.48
SDCBP-204ENST00000447182 MAN2C1Q9NTJ4 1040 aa18.04■□□□□ 0.48
SDCBP-204ENST00000447182 RTCAO00442 366 aaKnown RBP18.04■□□□□ 0.48
SDCBP-204ENST00000447182 PLA2G10O15496 165 aa18.04■□□□□ 0.48
SDCBP-204ENST00000447182 PAPLNO95428 1278 aa18.04■□□□□ 0.48
SDCBP-204ENST00000447182 HLA-DQB1P01920 261 aa18.04■□□□□ 0.48
SDCBP-204ENST00000447182 FGF9P31371 208 aaPredicted RBP18.04■□□□□ 0.48
SDCBP-204ENST00000447182 SMSP52788 366 aa18.04■□□□□ 0.48
SDCBP-204ENST00000447182 DAB2P98082 770 aa18.04■□□□□ 0.48
SDCBP-204ENST00000447182 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.04■□□□□ 0.48
SDCBP-204ENST00000447182 LY6G5CQ5SRR4 150 aa18.04■□□□□ 0.48
SDCBP-204ENST00000447182 COMTD1Q86VU5 262 aa18.04■□□□□ 0.48
SDCBP-204ENST00000447182 MORN4Q8NDC4 146 aa18.04■□□□□ 0.48
SDCBP-204ENST00000447182 OR2L2Q8NH16 312 aa18.04■□□□□ 0.48
SDCBP-204ENST00000447182 TM9SF4Q92544 642 aa18.04■□□□□ 0.48
SDCBP-204ENST00000447182 RIPOR3Q96MK2 946 aa18.04■□□□□ 0.48
SDCBP-204ENST00000447182 IL17FQ96PD4 163 aa18.04■□□□□ 0.48
SDCBP-204ENST00000447182 F2RL3Q96RI0 385 aa18.04■□□□□ 0.48
SDCBP-204ENST00000447182 LINC00597Q9H2U6 94 aa18.04■□□□□ 0.48
SDCBP-204ENST00000447182 PELI2Q9HAT8 420 aa18.04■□□□□ 0.48
SDCBP-204ENST00000447182 FBXW2Q9UKT8 454 aa18.04■□□□□ 0.48
SDCBP-204ENST00000447182 LRRK1Q38SD2 2015 aa18.03■□□□□ 0.48
SDCBP-204ENST00000447182 A0A0B4J293 547 aa18.03■□□□□ 0.48
SDCBP-204ENST00000447182 K7ESM1 405 aa18.03■□□□□ 0.48
SDCBP-204ENST00000447182 SLC30A4O14863 429 aa18.03■□□□□ 0.48
SDCBP-204ENST00000447182 PRODHO43272 600 aa18.03■□□□□ 0.48
SDCBP-204ENST00000447182 EPHX1P07099 455 aa18.03■□□□□ 0.48
SDCBP-204ENST00000447182 KELP23276 732 aa18.03■□□□□ 0.48
SDCBP-204ENST00000447182 GPC1P35052 558 aa18.03■□□□□ 0.48
SDCBP-204ENST00000447182 KIR2DL3P43628 341 aa18.03■□□□□ 0.48
SDCBP-204ENST00000447182 SYPL1Q16563 259 aa18.03■□□□□ 0.48
SDCBP-204ENST00000447182 PYDC2Q56P42 97 aa18.03■□□□□ 0.48
SDCBP-204ENST00000447182 YIF1BQ5BJH7 314 aa18.03■□□□□ 0.48
SDCBP-204ENST00000447182 CD200R1LQ6Q8B3 271 aa18.03■□□□□ 0.48
SDCBP-204ENST00000447182 ZNF765Q7L2R6 523 aa18.03■□□□□ 0.48
SDCBP-204ENST00000447182 MRGPREQ86SM8 312 aa18.03■□□□□ 0.48
SDCBP-204ENST00000447182 ANKRD53Q8N9V6 530 aa18.03■□□□□ 0.48
SDCBP-204ENST00000447182 C17orf50Q8WW18 174 aa18.03■□□□□ 0.48
SDCBP-204ENST00000447182 RNF31Q96EP0 1072 aa18.03■□□□□ 0.48
SDCBP-204ENST00000447182 SOSTQ9BQB4 213 aa18.03■□□□□ 0.48
SDCBP-204ENST00000447182 OR52A5Q9H2C5 316 aa18.03■□□□□ 0.48
SDCBP-204ENST00000447182 NUFIP1Q9UHK0 495 aaKnown RBP18.03■□□□□ 0.48
SDCBP-204ENST00000447182 GPR34Q9UPC5 381 aa18.03■□□□□ 0.48
SDCBP-204ENST00000447182 SLC9A8Q9Y2E8 581 aa18.03■□□□□ 0.48
SDCBP-204ENST00000447182 GSTK1Q9Y2Q3 226 aa18.03■□□□□ 0.48
SDCBP-204ENST00000447182 BOLA1Q9Y3E2 137 aa18.03■□□□□ 0.48
SDCBP-204ENST00000447182 MAU2Q9Y6X3 613 aa18.03■□□□□ 0.48
SDCBP-204ENST00000447182 SNTNA6NMZ2 147 aa18.02■□□□□ 0.48
SDCBP-204ENST00000447182 FAM25AB3EWG3 89 aa18.02■□□□□ 0.48
SDCBP-204ENST00000447182 FAM25CB3EWG5 89 aa18.02■□□□□ 0.48
SDCBP-204ENST00000447182 FAM25GB3EWG6 89 aa18.02■□□□□ 0.48
SDCBP-204ENST00000447182 M0R3H8 397 aa18.02■□□□□ 0.48
SDCBP-204ENST00000447182 SPINT1O43278 529 aa18.02■□□□□ 0.48
SDCBP-204ENST00000447182 POP7O75817 140 aaKnown RBP18.02■□□□□ 0.48
SDCBP-204ENST00000447182 OR12D1P0DN82 309 aa18.02■□□□□ 0.48
SDCBP-204ENST00000447182 ERGP11308 486 aa18.02■□□□□ 0.48
SDCBP-204ENST00000447182 GSTM3P21266 225 aa18.02■□□□□ 0.48
SDCBP-204ENST00000447182 CPN2P22792 545 aa18.02■□□□□ 0.48
SDCBP-204ENST00000447182 GABRA5P31644 462 aa18.02■□□□□ 0.48
SDCBP-204ENST00000447182 RPS25P62851 125 aaKnown RBP18.02■□□□□ 0.48
SDCBP-204ENST00000447182 PPP3R1P63098 170 aa18.02■□□□□ 0.48
SDCBP-204ENST00000447182 SNAPC1Q16533 368 aa18.02■□□□□ 0.48
SDCBP-204ENST00000447182 LCN1P1Q5VSP4 162 aa18.02■□□□□ 0.48
SDCBP-204ENST00000447182 CNKSR3Q6P9H4 555 aa18.02■□□□□ 0.48
SDCBP-204ENST00000447182 ZNF438Q7Z4V0 828 aa18.02■□□□□ 0.48
SDCBP-204ENST00000447182 C17orf64Q86WR6 236 aa18.02■□□□□ 0.48
SDCBP-204ENST00000447182 LIX1LQ8IVB5 337 aa18.02■□□□□ 0.48
SDCBP-204ENST00000447182 PLA2G15Q8NCC3 412 aa18.02■□□□□ 0.48
SDCBP-204ENST00000447182 TMEM163Q8TC26 289 aa18.02■□□□□ 0.48
SDCBP-204ENST00000447182 C1GALT1C1Q96EU7 318 aa18.02■□□□□ 0.48
SDCBP-204ENST00000447182 ZC3HAV1LQ96H79 300 aaKnown RBP18.02■□□□□ 0.48
SDCBP-204ENST00000447182 FYTTD1Q96QD9 318 aaKnown RBP18.02■□□□□ 0.48
SDCBP-204ENST00000447182 GPA33Q99795 319 aa18.02■□□□□ 0.48
SDCBP-204ENST00000447182 AIF1LQ9BQI0 150 aa18.02■□□□□ 0.48
SDCBP-204ENST00000447182 LHX9Q9NQ69 397 aa18.02■□□□□ 0.48
SDCBP-204ENST00000447182 C5AR2Q9P296 337 aa18.02■□□□□ 0.48
SDCBP-204ENST00000447182 ABT1Q9ULW3 272 aaKnown RBP18.02■□□□□ 0.48
SDCBP-204ENST00000447182 CARD8Q9Y2G2 431 aa18.02■□□□□ 0.48
SDCBP-204ENST00000447182 PRRC2BQ5JSZ5 2229 aaKnown RBP18.02■□□□□ 0.48
SDCBP-204ENST00000447182 HCN1O60741 890 aa18.02■□□□□ 0.47
SDCBP-204ENST00000447182 FHP07954 510 aa18.02■□□□□ 0.47
SDCBP-204ENST00000447182 UBE3AQ05086 875 aa18.02■□□□□ 0.47
SDCBP-204ENST00000447182 NFE2L1Q14494 772 aa18.02■□□□□ 0.47
SDCBP-204ENST00000447182 QPRTQ15274 297 aa18.02■□□□□ 0.47
SDCBP-204ENST00000447182 IQCHQ86VS3 1027 aa18.02■□□□□ 0.47
SDCBP-204ENST00000447182 TCTE3Q8IZS6 198 aa18.02■□□□□ 0.47
SDCBP-204ENST00000447182 GRPEL2Q8TAA5 225 aa18.02■□□□□ 0.47
SDCBP-204ENST00000447182 UFD1Q92890 307 aa18.02■□□□□ 0.47
SDCBP-204ENST00000447182 EXOSC8Q96B26 276 aaKnown RBP18.02■□□□□ 0.47
SDCBP-204ENST00000447182 PRRC1Q96M27 445 aa18.02■□□□□ 0.47
SDCBP-204ENST00000447182 ZBP1Q9H171 429 aa18.02■□□□□ 0.47
SDCBP-204ENST00000447182 OR51I1Q9H343 314 aa18.02■□□□□ 0.47
SDCBP-204ENST00000447182 SYNDIG1Q9H7V2 258 aa18.02■□□□□ 0.47
SDCBP-204ENST00000447182 WASH6PQ9NQA3 447 aa18.02■□□□□ 0.47
SDCBP-204ENST00000447182 PLSCR3Q9NRY6 295 aa18.02■□□□□ 0.47
SDCBP-204ENST00000447182 TAS2R7Q9NYW3 318 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms