RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 ARHGEF35A5YM69 484 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 PP2D1A8MPX8 630 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 PRAC2D3DTV9 90 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 H3BMQ9 156 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 HAT1O14929 419 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 CLOCKO15516 846 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 APOA1P02647 267 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 RAB40ALP0C0E4 278 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 THRAP10827 490 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 RALBP11234 206 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 GAP43P17677 238 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 EEF1B2P24534 225 aaKnown RBP4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 SERPINB9P50453 376 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 IST1P53990 364 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 AQP5P55064 265 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 TIMM10P62072 90 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 ACSM1Q08AH1 577 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 BST2Q10589 180 aaKnown RBP4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 ILF2Q12905 390 aaKnown RBP4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 MFAP5Q13361 173 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 MESDQ14696 234 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 EFTUD2Q15029 972 aaKnown RBP eCLIP4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 SLC1A5Q15758 541 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 KCNJ8Q15842 424 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 PKN2Q16513 984 aaKnown RBP4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 TYSND1Q2T9J0 566 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 MDH1BQ5I0G3 518 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 RSBN1Q5VWQ0 802 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 PDPK2PQ6A1A2 396 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 ZNF544Q6NX49 715 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 ZNF790Q6PG37 636 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 SPSB3Q6PJ21 355 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 C4orf22Q6V702 233 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 KIF6Q6ZMV9 814 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 DGLUCYQ7Z3D6 616 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 CARM1Q86X55 608 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 GRAMD2AQ8IUY3 354 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 CCDC60Q8IWA6 550 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 GPALPP1Q8IXQ4 340 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 PDIK1LQ8N165 341 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 CPSF7Q8N684 471 aaKnown RBP4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 C4orf32Q8N8J7 132 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 BANPQ8N9N5 519 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 SLC4A11Q8NBS3 891 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 OR5M8Q8NGP6 311 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 LMO3Q8TAP4 145 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 PDCD6IPQ8WUM4 868 aaKnown RBP4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 ROBO4Q8WZ75 1007 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 SEPT8Q92599 483 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 PEX13Q92968 403 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 SIPA1Q96FS4 1042 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 ZNF486Q96H40 463 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 C9orf72Q96LT7 481 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 ZNF597Q96LX8 424 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 PLIN2Q99541 437 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 EGFL8Q99944 293 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 APOL4Q9BPW4 351 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 CNPY3Q9BT09 278 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 YTHDF1Q9BYJ9 559 aaKnown RBP4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 SLC2A11Q9BYW1 496 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 THAP2Q9H0W7 228 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 GLT8D2Q9H1C3 349 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 TRPV6Q9H1D0 765 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 EVA1AQ9H8M9 152 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 ACKR4Q9NPB9 350 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 ZC4H2Q9NQZ6 224 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 RAB20Q9NX57 234 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 BARHL2Q9NY43 387 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 ARMCX1Q9P291 453 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 ATP6V1HQ9UI12 483 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 XPO7Q9UIA9 1087 aaKnown RBP4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 RIMS3Q9UJD0 308 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 GRID1Q9ULK0 1009 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 EIF3LQ9Y262 564 aaKnown RBP4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 TNFRSF18Q9Y5U5 241 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 CPQQ9Y646 472 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 ALG6Q9Y672 507 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 IGSF9BQ9UPX0 1349 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 NRAPQ86VF7 1730 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 ARPC4-TTLL3A0A0A6YYG9 625 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 A0A1W2PPI3 338 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 MAGEB16A2A368 324 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 HYKKA2RU49 373 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 SMCO2A6NFE2 343 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 ANKRD63C9JTQ0 380 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 H3BSA7 217 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 PTGESO14684 152 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 ACOX3O15254 700 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 CLDN3O15551 220 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 ARHGEF9O43307 516 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 SCO2O43819 266 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 GLRA3O75311 464 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 CCNE2O96020 404 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 IGHV4-39P01824 125 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 NR3C1P04150 777 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 CAPN1P07384 714 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 TFPTP0C1Z6 253 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 CETPP11597 493 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 GLULP15104 373 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms