RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 SPANXN4Q5MJ08 99 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 DCDC5Q6ZRR9 648 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 C22orf15Q8WYQ4 148 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 VRK1Q99986 396 aaPredicted RBP8.15□□□□□ -1.1
PTPN3-204ENST00000446349 CWH43Q9H720 699 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 TAS2R8Q9NYW2 309 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 TOGARAM1Q9Y4F4 1720 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 PRKYO43930 277 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 ATE1O95260 518 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 BTBD16Q32M84 506 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 FBXO48Q5FWF7 155 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 RBM20Q5T481 1227 aaKnown RBP8.15□□□□□ -1.1
PTPN3-204ENST00000446349 GAREM2Q75VX8 874 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 LAS2Q8IYD9 372 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 SCAMP4Q969E2 229 aa8.15□□□□□ -1.1
PTPN3-204ENST00000446349 NSG1A0A0A6YYJ2 146 aa8.15□□□□□ -1.11
PTPN3-204ENST00000446349 GGT3PA6NGU5 568 aa8.15□□□□□ -1.11
PTPN3-204ENST00000446349 SLC33A1O00400 549 aaPredicted RBP8.15□□□□□ -1.11
PTPN3-204ENST00000446349 RTCAO00442 366 aaKnown RBP8.15□□□□□ -1.11
PTPN3-204ENST00000446349 ADORA3P0DMS8 318 aa8.15□□□□□ -1.11
PTPN3-204ENST00000446349 CDKL1Q00532 357 aa8.15□□□□□ -1.11
PTPN3-204ENST00000446349 SGCAQ16586 387 aa8.15□□□□□ -1.11
PTPN3-204ENST00000446349 TMEM214Q6NUQ4 689 aaKnown RBP8.15□□□□□ -1.11
PTPN3-204ENST00000446349 DPAGT1Q9H3H5 408 aa8.15□□□□□ -1.11
PTPN3-204ENST00000446349 CXorf21Q9HAI6 301 aa8.15□□□□□ -1.11
PTPN3-204ENST00000446349 A0A1W2PPW3 197 aa8.15□□□□□ -1.11
PTPN3-204ENST00000446349 C5orf51A6NDU8 294 aa8.15□□□□□ -1.11
PTPN3-204ENST00000446349 C2orf71A6NGG8 1288 aa8.15□□□□□ -1.11
PTPN3-204ENST00000446349 J3QLW9 94 aa8.15□□□□□ -1.11
PTPN3-204ENST00000446349 ZNF19P17023 458 aa8.15□□□□□ -1.11
PTPN3-204ENST00000446349 NKX3-2P78367 333 aa8.15□□□□□ -1.11
PTPN3-204ENST00000446349 GARNL3Q5VVW2 1013 aa8.15□□□□□ -1.11
PTPN3-204ENST00000446349 ZNF367Q7RTV3 350 aa8.15□□□□□ -1.11
PTPN3-204ENST00000446349 ANKRD33Q7Z3H0 272 aa8.15□□□□□ -1.11
PTPN3-204ENST00000446349 FITM2Q8N6M3 262 aa8.15□□□□□ -1.11
PTPN3-204ENST00000446349 TMEM178AQ8NBL3 297 aa8.15□□□□□ -1.11
PTPN3-204ENST00000446349 HUS1BQ8NHY5 278 aa8.15□□□□□ -1.11
PTPN3-204ENST00000446349 ABRACLQ9P1F3 81 aa8.15□□□□□ -1.11
PTPN3-204ENST00000446349 ZNF221Q9UK13 617 aa8.15□□□□□ -1.11
PTPN3-204ENST00000446349 TFECO14948 347 aaPredicted RBP8.15□□□□□ -1.11
PTPN3-204ENST00000446349 PRKCAP17252 672 aa8.15□□□□□ -1.11
PTPN3-204ENST00000446349 CFL1P23528 166 aaKnown RBP8.15□□□□□ -1.11
PTPN3-204ENST00000446349 FRKP42685 505 aaPredicted RBP8.15□□□□□ -1.11
PTPN3-204ENST00000446349 UFM1P61960 85 aa8.15□□□□□ -1.11
PTPN3-204ENST00000446349 SOX4Q06945 474 aaPredicted RBP8.15□□□□□ -1.11
PTPN3-204ENST00000446349 TMEM151BQ8IW70 566 aa8.15□□□□□ -1.11
PTPN3-204ENST00000446349 APCDD1Q8J025 514 aa8.15□□□□□ -1.11
PTPN3-204ENST00000446349 THAP6Q8TBB0 222 aa8.15□□□□□ -1.11
PTPN3-204ENST00000446349 GCDHQ92947 438 aaPredicted RBP8.15□□□□□ -1.11
PTPN3-204ENST00000446349 ESAMQ96AP7 390 aa8.15□□□□□ -1.11
PTPN3-204ENST00000446349 SH3YL1Q96HL8 342 aaPredicted RBP8.15□□□□□ -1.11
PTPN3-204ENST00000446349 SFXN2Q96NB2 322 aa8.15□□□□□ -1.11
PTPN3-204ENST00000446349 ADAM29Q9UKF5 820 aa8.15□□□□□ -1.11
PTPN3-204ENST00000446349 OR12D1P0DN82 309 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 NCK1P16333 377 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 CD70P32970 193 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 HOXD13P35453 343 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 PCLAFQ15004 111 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 ZNF619Q8N2I2 560 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 SLC2A12Q8TD20 617 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 PPP1R14BQ96C90 147 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 A0A075B6Q4 140 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 KANTRA0A1W2PQU2 76 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 PRSS38A1L453 326 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 TRAPPC13A5PLN9 417 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 SCO2O43819 266 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 P2RY2P41231 377 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 SCN7AQ01118 1682 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 DOC2AQ14183 400 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 C4orf46Q504U0 113 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 LARP4Q71RC2 724 aaKnown RBP eCLIP8.14□□□□□ -1.11
PTPN3-204ENST00000446349 PROKR1Q8TCW9 393 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 ZPBPQ9BS86 351 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 SLC5A7Q9GZV3 580 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 SLCO3A1Q9UIG8 710 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 SALL4Q9UJQ4 1053 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 RAC2P15153 192 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 DIO3P55073 304 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 CDK3Q00526 305 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 KLF1Q13351 362 aaPredicted RBP8.14□□□□□ -1.11
PTPN3-204ENST00000446349 ANKRD26P1Q6NSI1 321 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 CRTC1Q6UUV9 634 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 PHF7Q9BWX1 381 aaPredicted RBP8.14□□□□□ -1.11
PTPN3-204ENST00000446349 HCAR1Q9BXC0 346 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 COQ10BQ9H8M1 238 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 SLAMF7Q9NQ25 335 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 HCFC2Q9Y5Z7 792 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 FUOMA2VDF0 154 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 NDUFV2P19404 249 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 DCDC1P59894 354 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 OGDHQ02218 1023 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 C6orf52Q5T4I8 152 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 ZNF598Q86UK7 904 aaKnown RBP8.14□□□□□ -1.11
PTPN3-204ENST00000446349 OR52N2Q8NGI0 321 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 LMO3Q8TAP4 145 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 SLC45A3Q96JT2 553 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 MRPS14O60783 128 aaKnown RBP8.14□□□□□ -1.11
PTPN3-204ENST00000446349 SPARCP09486 303 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 CD36P16671 472 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 VASPP50552 380 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms