RNA–Protein interactions for RNA: ENST00000445623.1

TIMP1-204, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2

Gene TIMP1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-204ENST00000445623 KAT2AQ92830 837 aa12.28□□□□□ -0.44
TIMP1-204ENST00000445623 NCLNQ969V3 563 aa12.28□□□□□ -0.44
TIMP1-204ENST00000445623 VPS33AQ96AX1 596 aa12.28□□□□□ -0.44
TIMP1-204ENST00000445623 MOAP1Q96BY2 351 aa12.28□□□□□ -0.44
TIMP1-204ENST00000445623 CMTM5Q96DZ9 223 aa12.28□□□□□ -0.44
TIMP1-204ENST00000445623 SENP5Q96HI0 755 aaPredicted RBP12.28□□□□□ -0.44
TIMP1-204ENST00000445623 IMMP1LQ96LU5 166 aa12.28□□□□□ -0.44
TIMP1-204ENST00000445623 CCDC106Q9BWC9 280 aa12.28□□□□□ -0.44
TIMP1-204ENST00000445623 MMP25Q9NPA2 562 aa12.28□□□□□ -0.44
TIMP1-204ENST00000445623 ATP13A2Q9NQ11 1180 aa12.28□□□□□ -0.44
TIMP1-204ENST00000445623 DDX18Q9NVP1 670 aaKnown RBP12.28□□□□□ -0.44
TIMP1-204ENST00000445623 PRODH2Q9UF12 536 aa12.28□□□□□ -0.44
TIMP1-204ENST00000445623 VPS4AQ9UN37 437 aa12.28□□□□□ -0.44
TIMP1-204ENST00000445623 PPIEQ9UNP9 301 aaKnown RBP12.28□□□□□ -0.44
TIMP1-204ENST00000445623 NDUFAF1Q9Y375 327 aa12.28□□□□□ -0.44
TIMP1-204ENST00000445623 SNX8Q9Y5X2 465 aa12.28□□□□□ -0.44
TIMP1-204ENST00000445623 ARGFXA6NJG6 315 aa12.27□□□□□ -0.45
TIMP1-204ENST00000445623 OR6C76A6NM76 312 aa12.27□□□□□ -0.45
TIMP1-204ENST00000445623 TAF4O00268 1085 aa12.27□□□□□ -0.45
TIMP1-204ENST00000445623 PRAMEF2O60811 474 aa12.27□□□□□ -0.45
TIMP1-204ENST00000445623 SCN2BO60939 215 aa12.27□□□□□ -0.45
TIMP1-204ENST00000445623 ANP32DO95626 131 aa12.27□□□□□ -0.45
TIMP1-204ENST00000445623 DDAH2O95865 285 aa12.27□□□□□ -0.45
TIMP1-204ENST00000445623 SERPINA7P05543 415 aa12.27□□□□□ -0.45
TIMP1-204ENST00000445623 CAPN3P20807 821 aa12.27□□□□□ -0.45
TIMP1-204ENST00000445623 PRDX6P30041 224 aa12.27□□□□□ -0.45
TIMP1-204ENST00000445623 SOAT1P35610 550 aa12.27□□□□□ -0.45
TIMP1-204ENST00000445623 MC3RP41968 323 aa12.27□□□□□ -0.45
TIMP1-204ENST00000445623 TRPC1P48995 793 aa12.27□□□□□ -0.45
TIMP1-204ENST00000445623 HBA1P69905 142 aa12.27□□□□□ -0.45
TIMP1-204ENST00000445623 MRPS35P82673 323 aaKnown RBP12.27□□□□□ -0.45
TIMP1-204ENST00000445623 FUT7Q11130 342 aa12.27□□□□□ -0.45
TIMP1-204ENST00000445623 COQ5Q5HYK3 327 aa12.27□□□□□ -0.45
TIMP1-204ENST00000445623 ATP1A1-AS1Q5TC04 95 aa12.27□□□□□ -0.45
TIMP1-204ENST00000445623 FAM91A1Q658Y4 838 aa12.27□□□□□ -0.45
TIMP1-204ENST00000445623 JMJD6Q6NYC1 403 aaPredicted RBP12.27□□□□□ -0.45
TIMP1-204ENST00000445623 FAM111BQ6SJ93 734 aa12.27□□□□□ -0.45
TIMP1-204ENST00000445623 DGAT2L6Q6ZPD8 337 aa12.27□□□□□ -0.45
TIMP1-204ENST00000445623 SZRD1Q7Z422 152 aa12.27□□□□□ -0.45
TIMP1-204ENST00000445623 SNX32Q86XE0 403 aa12.27□□□□□ -0.45
TIMP1-204ENST00000445623 CLECL1Q8IZS7 167 aa12.27□□□□□ -0.45
TIMP1-204ENST00000445623 NFAM1Q8NET5 270 aaPredicted RBP12.27□□□□□ -0.45
TIMP1-204ENST00000445623 OR56A1Q8NGH5 318 aa12.27□□□□□ -0.45
TIMP1-204ENST00000445623 SFXN5Q8TD22 340 aa12.27□□□□□ -0.45
TIMP1-204ENST00000445623 ZNF721Q8TF20 911 aa12.27□□□□□ -0.45
TIMP1-204ENST00000445623 CTHRC1Q96CG8 243 aa12.27□□□□□ -0.45
TIMP1-204ENST00000445623 ELP4Q96EB1 424 aa12.27□□□□□ -0.45
TIMP1-204ENST00000445623 MESP1Q9BRJ9 268 aa12.27□□□□□ -0.45
TIMP1-204ENST00000445623 BCAP29Q9UHQ4 241 aa12.27□□□□□ -0.45
TIMP1-204ENST00000445623 ZNF639Q9UID6 485 aa12.27□□□□□ -0.45
TIMP1-204ENST00000445623 LOC100653049A0A140TA62 436 aa12.26□□□□□ -0.45
TIMP1-204ENST00000445623 EMC8O43402 210 aa12.26□□□□□ -0.45
TIMP1-204ENST00000445623 ERN1O75460 977 aaKnown RBP12.26□□□□□ -0.45
TIMP1-204ENST00000445623 KRT34O76011 436 aa12.26□□□□□ -0.45
TIMP1-204ENST00000445623 KCNH1O95259 989 aa12.26□□□□□ -0.45
TIMP1-204ENST00000445623 IGKV3-11P04433 115 aa12.26□□□□□ -0.45
TIMP1-204ENST00000445623 CT62P0C5K7 136 aa12.26□□□□□ -0.45
TIMP1-204ENST00000445623 UQCRC2P22695 453 aa12.26□□□□□ -0.45
TIMP1-204ENST00000445623 ITGA3P26006 1051 aa12.26□□□□□ -0.45
TIMP1-204ENST00000445623 ITPKBP27987 946 aa12.26□□□□□ -0.45
TIMP1-204ENST00000445623 PTGER1P34995 402 aa12.26□□□□□ -0.45
TIMP1-204ENST00000445623 CCT3P49368 545 aaKnown RBP12.26□□□□□ -0.45
TIMP1-204ENST00000445623 CDK9P50750 372 aaKnown RBP12.26□□□□□ -0.45
TIMP1-204ENST00000445623 MGAT2Q10469 447 aa12.26□□□□□ -0.45
TIMP1-204ENST00000445623 DEFB109BQ30KR1 87 aa12.26□□□□□ -0.45
TIMP1-204ENST00000445623 TRMT12Q53H54 448 aaKnown RBP12.26□□□□□ -0.45
TIMP1-204ENST00000445623 SLC2A7Q6PXP3 512 aa12.26□□□□□ -0.45
TIMP1-204ENST00000445623 HSDL2Q6YN16 418 aa12.26□□□□□ -0.45
TIMP1-204ENST00000445623 SLC29A4Q7RTT9 530 aa12.26□□□□□ -0.45
TIMP1-204ENST00000445623 OR2L13Q8N349 312 aa12.26□□□□□ -0.45
TIMP1-204ENST00000445623 PCYOX1LQ8NBM8 494 aa12.26□□□□□ -0.45
TIMP1-204ENST00000445623 OR7G2Q8NG99 324 aa12.26□□□□□ -0.45
TIMP1-204ENST00000445623 OR52R1Q8NGF1 315 aa12.26□□□□□ -0.45
TIMP1-204ENST00000445623 OR5L2Q8NGL0 311 aa12.26□□□□□ -0.45
TIMP1-204ENST00000445623 OR8K3Q8NH51 312 aa12.26□□□□□ -0.45
TIMP1-204ENST00000445623 GOT1L1Q8NHS2 421 aaPredicted RBP12.26□□□□□ -0.45
TIMP1-204ENST00000445623 MAGED4Q96JG8 741 aa12.26□□□□□ -0.45
TIMP1-204ENST00000445623 DEFB126Q9BYW3 111 aa12.26□□□□□ -0.45
TIMP1-204ENST00000445623 SEMA4CQ9C0C4 833 aa12.26□□□□□ -0.45
TIMP1-204ENST00000445623 ING2Q9H160 280 aa12.26□□□□□ -0.45
TIMP1-204ENST00000445623 OR10A5Q9H207 317 aa12.26□□□□□ -0.45
TIMP1-204ENST00000445623 CPNE5Q9HCH3 593 aa12.26□□□□□ -0.45
TIMP1-204ENST00000445623 ZCCHC3Q9NUD5 404 aaKnown RBP12.26□□□□□ -0.45
TIMP1-204ENST00000445623 C19orf53Q9UNZ5 99 aaPredicted RBP12.26□□□□□ -0.45
TIMP1-204ENST00000445623 A0A096LPI6 279 aa12.25□□□□□ -0.45
TIMP1-204ENST00000445623 TRBV11-1A0A0K0K1C0 115 aa12.25□□□□□ -0.45
TIMP1-204ENST00000445623 RNF103-CHMP3A0A140T963 221 aa12.25□□□□□ -0.45
TIMP1-204ENST00000445623 CAPN14A8MX76 684 aa12.25□□□□□ -0.45
TIMP1-204ENST00000445623 UPK1AO00322 258 aa12.25□□□□□ -0.45
TIMP1-204ENST00000445623 MRASO14807 208 aa12.25□□□□□ -0.45
TIMP1-204ENST00000445623 ZFAND5O76080 213 aa12.25□□□□□ -0.45
TIMP1-204ENST00000445623 CBX7O95931 251 aa12.25□□□□□ -0.45
TIMP1-204ENST00000445623 KRT16P08779 473 aa12.25□□□□□ -0.45
TIMP1-204ENST00000445623 COX4I1P13073 169 aa12.25□□□□□ -0.45
TIMP1-204ENST00000445623 SSTR4P31391 388 aa12.25□□□□□ -0.45
TIMP1-204ENST00000445623 CHI3L1P36222 383 aaPredicted RBP12.25□□□□□ -0.45
TIMP1-204ENST00000445623 GPR143P51810 404 aa12.25□□□□□ -0.45
TIMP1-204ENST00000445623 SLC37A1P57057 533 aa12.25□□□□□ -0.45
TIMP1-204ENST00000445623 CXADRP78310 365 aa12.25□□□□□ -0.45
TIMP1-204ENST00000445623 EXOSC7Q15024 291 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms