RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 MDS2Q8NDY4 140 aa22.2■■□□□ 1.14
C9orf3-207ENST00000445181 ADCY4Q8NFM4 1077 aa22.2■■□□□ 1.14
C9orf3-207ENST00000445181 GFM2Q969S9 779 aaKnown RBP22.2■■□□□ 1.14
C9orf3-207ENST00000445181 TMEM125Q96AQ2 219 aa22.2■■□□□ 1.14
C9orf3-207ENST00000445181 TUBGCP3Q96CW5 907 aa22.2■■□□□ 1.14
C9orf3-207ENST00000445181 PPP1R36Q96LQ0 422 aa22.2■■□□□ 1.14
C9orf3-207ENST00000445181 C3orf30Q96M34 536 aa22.2■■□□□ 1.14
C9orf3-207ENST00000445181 ZNF681Q96N22 645 aa22.2■■□□□ 1.14
C9orf3-207ENST00000445181 GIMAP2Q9UG22 337 aa22.2■■□□□ 1.14
C9orf3-207ENST00000445181 ERVK-11Q9UQG0 969 aa22.2■■□□□ 1.14
C9orf3-207ENST00000445181 USP9XQ93008 2570 aaPredicted RBP22.2■■□□□ 1.14
C9orf3-207ENST00000445181 A8MVJ9 347 aa22.19■■□□□ 1.14
C9orf3-207ENST00000445181 SLC25A12O75746 678 aa22.19■■□□□ 1.14
C9orf3-207ENST00000445181 NEURL1O76050 574 aa22.19■■□□□ 1.14
C9orf3-207ENST00000445181 SDC1P18827 310 aa22.19■■□□□ 1.14
C9orf3-207ENST00000445181 DUSP2Q05923 314 aa22.19■■□□□ 1.14
C9orf3-207ENST00000445181 ELOAQ14241 798 aaKnown RBP22.19■■□□□ 1.14
C9orf3-207ENST00000445181 PRICKLE4Q2TBC4 344 aa22.19■■□□□ 1.14
C9orf3-207ENST00000445181 FAM111BQ6SJ93 734 aa22.19■■□□□ 1.14
C9orf3-207ENST00000445181 FAM180AQ6UWF9 173 aa22.19■■□□□ 1.14
C9orf3-207ENST00000445181 CYP4Z2PQ8N1L4 340 aa22.19■■□□□ 1.14
C9orf3-207ENST00000445181 TMEM178AQ8NBL3 297 aa22.19■■□□□ 1.14
C9orf3-207ENST00000445181 OR7G1Q8NGA0 311 aa22.19■■□□□ 1.14
C9orf3-207ENST00000445181 NUBPLQ8TB37 319 aa22.19■■□□□ 1.14
C9orf3-207ENST00000445181 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.19■■□□□ 1.14
C9orf3-207ENST00000445181 GRHL3Q8TE85 626 aa22.19■■□□□ 1.14
C9orf3-207ENST00000445181 SSC4DQ8WTU2 575 aa22.19■■□□□ 1.14
C9orf3-207ENST00000445181 EGLN2Q96KS0 407 aa22.19■■□□□ 1.14
C9orf3-207ENST00000445181 FCRL1Q96LA6 429 aa22.19■■□□□ 1.14
C9orf3-207ENST00000445181 TSSK3Q96PN8 268 aa22.19■■□□□ 1.14
C9orf3-207ENST00000445181 RASL10BQ96S79 203 aa22.19■■□□□ 1.14
C9orf3-207ENST00000445181 SH3GL2Q99962 352 aa22.19■■□□□ 1.14
C9orf3-207ENST00000445181 HPF1Q9NWY4 346 aa22.19■■□□□ 1.14
C9orf3-207ENST00000445181 BCAP29Q9UHQ4 241 aa22.19■■□□□ 1.14
C9orf3-207ENST00000445181 LRATO95237 230 aa22.18■■□□□ 1.14
C9orf3-207ENST00000445181 RASAL1O95294 804 aa22.18■■□□□ 1.14
C9orf3-207ENST00000445181 SP1P08047 785 aa22.18■■□□□ 1.14
C9orf3-207ENST00000445181 MPIP34949 423 aa22.18■■□□□ 1.14
C9orf3-207ENST00000445181 FUT7Q11130 342 aa22.18■■□□□ 1.14
C9orf3-207ENST00000445181 LTB4RQ15722 352 aa22.18■■□□□ 1.14
C9orf3-207ENST00000445181 INAQ16352 499 aa22.18■■□□□ 1.14
C9orf3-207ENST00000445181 MAPKAPK3Q16644 382 aa22.18■■□□□ 1.14
C9orf3-207ENST00000445181 HLA-DQA1Q5Y7H0 255 aa22.18■■□□□ 1.14
C9orf3-207ENST00000445181 SLC25A25Q6KCM7 469 aa22.18■■□□□ 1.14
C9orf3-207ENST00000445181 FNDC5Q8NAU1 212 aa22.18■■□□□ 1.14
C9orf3-207ENST00000445181 CLHC1Q8NHS4 586 aa22.18■■□□□ 1.14
C9orf3-207ENST00000445181 RAB3IL1Q8TBN0 382 aa22.18■■□□□ 1.14
C9orf3-207ENST00000445181 HES7Q9BYE0 225 aa22.18■■□□□ 1.14
C9orf3-207ENST00000445181 WWTR1Q9GZV5 400 aa22.18■■□□□ 1.14
C9orf3-207ENST00000445181 OR10A5Q9H207 317 aa22.18■■□□□ 1.14
C9orf3-207ENST00000445181 MANSC1Q9H8J5 431 aa22.18■■□□□ 1.14
C9orf3-207ENST00000445181 TRIM45Q9H8W5 580 aaPredicted RBP22.18■■□□□ 1.14
C9orf3-207ENST00000445181 THAP1Q9NVV9 213 aa22.18■■□□□ 1.14
C9orf3-207ENST00000445181 MAT2BQ9NZL9 334 aa22.18■■□□□ 1.14
C9orf3-207ENST00000445181 BAIAP2L1Q9UHR4 511 aa22.18■■□□□ 1.14
C9orf3-207ENST00000445181 C2orf92A0A1B0GVN3 265 aa22.17■■□□□ 1.14
C9orf3-207ENST00000445181 HMGB1P1B2RPK0 211 aaPredicted RBP22.17■■□□□ 1.14
C9orf3-207ENST00000445181 AKAP10O43572 662 aa22.17■■□□□ 1.14
C9orf3-207ENST00000445181 CLPSP04118 112 aa22.17■■□□□ 1.14
C9orf3-207ENST00000445181 JUNP05412 331 aaKnown RBP22.17■■□□□ 1.14
C9orf3-207ENST00000445181 BCKDHAP12694 445 aa22.17■■□□□ 1.14
C9orf3-207ENST00000445181 NTSP30990 170 aa22.17■■□□□ 1.14
C9orf3-207ENST00000445181 SOX3P41225 446 aa22.17■■□□□ 1.14
C9orf3-207ENST00000445181 ASMTP46597 345 aa22.17■■□□□ 1.14
C9orf3-207ENST00000445181 MAP4K2Q12851 820 aa22.17■■□□□ 1.14
C9orf3-207ENST00000445181 EBPQ15125 230 aaKnown RBP22.17■■□□□ 1.14
C9orf3-207ENST00000445181 MPEG1Q2M385 716 aa22.17■■□□□ 1.14
C9orf3-207ENST00000445181 C6orf136Q5SQH8 315 aa22.17■■□□□ 1.14
C9orf3-207ENST00000445181 IL20RBQ6UXL0 311 aa22.17■■□□□ 1.14
C9orf3-207ENST00000445181 GPALPP1Q8IXQ4 340 aa22.17■■□□□ 1.14
C9orf3-207ENST00000445181 OR9A2Q8NGT5 310 aa22.17■■□□□ 1.14
C9orf3-207ENST00000445181 SLC22A8Q8TCC7 542 aa22.17■■□□□ 1.14
C9orf3-207ENST00000445181 C1orf50Q9BV19 199 aa22.17■■□□□ 1.14
C9orf3-207ENST00000445181 PNPOQ9NVS9 261 aa22.17■■□□□ 1.14
C9orf3-207ENST00000445181 PCDHGB6Q9Y5F9 930 aa22.17■■□□□ 1.14
C9orf3-207ENST00000445181 OR6B1O95007 311 aa22.16■■□□□ 1.14
C9orf3-207ENST00000445181 NCBP2P52298 156 aaKnown RBP eCLIP22.16■■□□□ 1.146e-7■■■■■ 27.1
C9orf3-207ENST00000445181 MRPS35P82673 323 aaKnown RBP22.16■■□□□ 1.14
C9orf3-207ENST00000445181 MGAT2Q10469 447 aa22.16■■□□□ 1.14
C9orf3-207ENST00000445181 EXOSC7Q15024 291 aaKnown RBP22.16■■□□□ 1.14
C9orf3-207ENST00000445181 PIGGQ5H8A4 983 aa22.16■■□□□ 1.14
C9orf3-207ENST00000445181 OPN5Q6U736 354 aa22.16■■□□□ 1.14
C9orf3-207ENST00000445181 GALNTL5Q7Z4T8 443 aa22.16■■□□□ 1.14
C9orf3-207ENST00000445181 FAM9CQ8IZT9 166 aa22.16■■□□□ 1.14
C9orf3-207ENST00000445181 LIX1Q8N485 282 aa22.16■■□□□ 1.14
C9orf3-207ENST00000445181 BCORP1Q8N888 145 aa22.16■■□□□ 1.14
C9orf3-207ENST00000445181 FAR1Q8WVX9 515 aa22.16■■□□□ 1.14
C9orf3-207ENST00000445181 SCMH1Q96GD3 660 aa22.16■■□□□ 1.14
C9orf3-207ENST00000445181 ACBD3Q9H3P7 528 aa22.16■■□□□ 1.14
C9orf3-207ENST00000445181 HAO1Q9UJM8 370 aa22.16■■□□□ 1.14
C9orf3-207ENST00000445181 CFL2Q9Y281 166 aa22.16■■□□□ 1.14
C9orf3-207ENST00000445181 USP9YO00507 2555 aaPredicted RBP22.15■■□□□ 1.14
C9orf3-207ENST00000445181 RNF224P0DH78 156 aa22.15■■□□□ 1.14
C9orf3-207ENST00000445181 PCSK2P16519 638 aa22.15■■□□□ 1.14
C9orf3-207ENST00000445181 MAD2L1Q13257 205 aaPredicted RBP22.15■■□□□ 1.14
C9orf3-207ENST00000445181 TRMT12Q53H54 448 aaKnown RBP22.15■■□□□ 1.14
C9orf3-207ENST00000445181 ANKRD26P1Q6NSI1 321 aa22.15■■□□□ 1.14
C9orf3-207ENST00000445181 TAGAPQ8N103 731 aa22.15■■□□□ 1.14
C9orf3-207ENST00000445181 ZNF615Q8N8J6 731 aa22.15■■□□□ 1.14
C9orf3-207ENST00000445181 FAM98AQ8NCA5 519 aaKnown RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms