RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 B3GNT7Q8NFL0 401 aa14.71□□□□□ -0.05
USP40-206ENST00000443711 OR7G1Q8NGA0 311 aa14.71□□□□□ -0.05
USP40-206ENST00000443711 GOT1L1Q8NHS2 421 aaPredicted RBP14.71□□□□□ -0.05
USP40-206ENST00000443711 M1APQ8TC57 530 aa14.71□□□□□ -0.05
USP40-206ENST00000443711 SLC2A12Q8TD20 617 aa14.71□□□□□ -0.05
USP40-206ENST00000443711 GTF2H4Q92759 462 aa14.71□□□□□ -0.05
USP40-206ENST00000443711 CMTM5Q96DZ9 223 aa14.71□□□□□ -0.05
USP40-206ENST00000443711 PANX1Q96RD7 426 aa14.71□□□□□ -0.05
USP40-206ENST00000443711 NEUROD4Q9HD90 331 aa14.71□□□□□ -0.05
USP40-206ENST00000443711 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.71□□□□□ -0.05
USP40-206ENST00000443711 PTGFRNQ9P2B2 879 aa14.71□□□□□ -0.05
USP40-206ENST00000443711 COPS7AQ9UBW8 275 aa14.71□□□□□ -0.05
USP40-206ENST00000443711 ZNF639Q9UID6 485 aa14.71□□□□□ -0.05
USP40-206ENST00000443711 ERVK-19Q9WJR5 959 aa14.71□□□□□ -0.05
USP40-206ENST00000443711 CHD8Q9HCK8 2581 aa14.71□□□□□ -0.06
USP40-206ENST00000443711 BBIP1A8MTZ0 92 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 CAPN14A8MX76 684 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 RFXANKO14593 260 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 EMC8O43402 210 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 ANP32DO95626 131 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 S1PR1P21453 382 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 ITPKBP27987 946 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 SOX18P35713 384 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 MC3RP41968 323 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 GPR143P51810 404 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 TMPRSS3P57727 454 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 AP2B1P63010 937 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 MRPS35P82673 323 aaKnown RBP14.7□□□□□ -0.06
USP40-206ENST00000443711 BTBD16Q32M84 506 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 MMEL1Q495T6 779 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 SPDYE7PQ495Y7 208 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 C6orf10Q5SRN2 563 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 TMEM107Q6UX40 140 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 RNF111Q6ZNA4 994 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 FITM2Q8N6M3 262 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 TRIML2Q8N7C3 387 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 TMEM102Q8N9M5 508 aaPredicted RBP14.7□□□□□ -0.06
USP40-206ENST00000443711 OR7G2Q8NG99 324 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 OR1N1Q8NGS0 311 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 DNAJB8Q8NHS0 232 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 ZNF721Q8TF20 911 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 NCLNQ969V3 563 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 MOAP1Q96BY2 351 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 VMP1Q96GC9 406 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 INPP5KQ9BT40 448 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 NUDT9Q9BW91 350 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 CXorf36Q9H7Y0 433 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 ATP13A2Q9NQ11 1180 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 SERHLQ9NQF3 203 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 SIRT3Q9NTG7 399 aaPredicted RBP14.7□□□□□ -0.06
USP40-206ENST00000443711 DDX18Q9NVP1 670 aaKnown RBP14.7□□□□□ -0.06
USP40-206ENST00000443711 BCAP29Q9UHQ4 241 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 VPS4AQ9UN37 437 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 C19orf53Q9UNZ5 99 aaPredicted RBP14.7□□□□□ -0.06
USP40-206ENST00000443711 MAN2B2Q9Y2E5 1009 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 SNX8Q9Y5X2 465 aa14.7□□□□□ -0.06
USP40-206ENST00000443711 ASPDHA6ND91 283 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 HRKO00198 91 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 UPK1AO00322 258 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 IGKV3-11P04433 115 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 SERPINA7P05543 415 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 ZCCHC18P0CG32 403 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 UQCRC2P22695 453 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 SSTR4P31391 388 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 SOAT1P35610 550 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 CCT3P49368 545 aaKnown RBP14.69□□□□□ -0.06
USP40-206ENST00000443711 CLCN2P51788 898 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 PRR5P85299 388 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 VAC14Q08AM6 782 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 AIMP2Q13155 320 aaKnown RBP14.69□□□□□ -0.06
USP40-206ENST00000443711 EXOSC7Q15024 291 aaKnown RBP14.69□□□□□ -0.06
USP40-206ENST00000443711 COQ5Q5HYK3 327 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 PAGE3Q5JUK9 113 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 DCAF10Q5QP82 559 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 FHL5Q5TD97 284 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 TMEM64Q6YI46 380 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 ZNF621Q6ZSS3 439 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 TRPM8Q7Z2W7 1104 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 KBTBD2Q8IY47 623 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 OR2L13Q8N349 312 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 DPP10Q8N608 796 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 POU5F2Q8N7G0 328 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 APCDD1LQ8NCL9 501 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 SFXN5Q8TD22 340 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 MAGED4Q96JG8 741 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 SEMA4CQ9C0C4 833 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 OR10A5Q9H207 317 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 MMP25Q9NPA2 562 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 NTMQ9P121 344 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 ERVK-11Q9UQG0 969 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 CFL2Q9Y281 166 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 PCSK5Q92824 1860 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 WDFY3Q8IZQ1 3526 aa14.69□□□□□ -0.06
USP40-206ENST00000443711 ANKRD11Q6UB99 2663 aaPredicted RBP14.68□□□□□ -0.06
USP40-206ENST00000443711 A0A096LPI6 279 aa14.68□□□□□ -0.06
USP40-206ENST00000443711 ARGFXA6NJG6 315 aa14.68□□□□□ -0.06
USP40-206ENST00000443711 OR6C76A6NM76 312 aa14.68□□□□□ -0.06
USP40-206ENST00000443711 K7ENP7 123 aa14.68□□□□□ -0.06
USP40-206ENST00000443711 FBP2O00757 339 aa14.68□□□□□ -0.06
USP40-206ENST00000443711 MRASO14807 208 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms