RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 PCSK2P16519 638 aa13.93□□□□□ -0.18
CSNK1E-210ENST00000442216 NTSP30990 170 aa13.93□□□□□ -0.18
CSNK1E-210ENST00000442216 SSTR4P31391 388 aa13.93□□□□□ -0.18
CSNK1E-210ENST00000442216 PPP2R2AP63151 447 aa13.93□□□□□ -0.18
CSNK1E-210ENST00000442216 FOXK1P85037 733 aa13.93□□□□□ -0.18
CSNK1E-210ENST00000442216 OCRLQ01968 901 aa13.93□□□□□ -0.18
CSNK1E-210ENST00000442216 EMX2Q04743 252 aa13.93□□□□□ -0.18
CSNK1E-210ENST00000442216 DUSP2Q05923 314 aa13.93□□□□□ -0.18
CSNK1E-210ENST00000442216 PDE7AQ13946 482 aa13.93□□□□□ -0.18
CSNK1E-210ENST00000442216 PDCD2Q16342 344 aaPredicted RBP13.93□□□□□ -0.18
CSNK1E-210ENST00000442216 ZNF628Q5EBL2 1059 aa13.93□□□□□ -0.18
CSNK1E-210ENST00000442216 ZNF468Q5VIY5 522 aaPredicted RBP13.93□□□□□ -0.18
CSNK1E-210ENST00000442216 SPINK14Q6IE38 97 aa13.93□□□□□ -0.18
CSNK1E-210ENST00000442216 SLC25A25Q6KCM7 469 aa13.93□□□□□ -0.18
CSNK1E-210ENST00000442216 OPN5Q6U736 354 aa13.93□□□□□ -0.18
CSNK1E-210ENST00000442216 DND1Q8IYX4 353 aaKnown RBP13.93□□□□□ -0.18
CSNK1E-210ENST00000442216 FAM9CQ8IZT9 166 aa13.93□□□□□ -0.18
CSNK1E-210ENST00000442216 CISD2Q8N5K1 135 aaKnown RBP13.93□□□□□ -0.18
CSNK1E-210ENST00000442216 FNDC5Q8NAU1 212 aa13.93□□□□□ -0.18
CSNK1E-210ENST00000442216 SLC22A8Q8TCC7 542 aa13.93□□□□□ -0.18
CSNK1E-210ENST00000442216 ASB15Q8WXK1 588 aa13.93□□□□□ -0.18
CSNK1E-210ENST00000442216 TMEM125Q96AQ2 219 aa13.93□□□□□ -0.18
CSNK1E-210ENST00000442216 C5orf34Q96MH7 638 aa13.93□□□□□ -0.18
CSNK1E-210ENST00000442216 TSSK3Q96PN8 268 aa13.93□□□□□ -0.18
CSNK1E-210ENST00000442216 BBS4Q96RK4 519 aa13.93□□□□□ -0.18
CSNK1E-210ENST00000442216 WWTR1Q9GZV5 400 aa13.93□□□□□ -0.18
CSNK1E-210ENST00000442216 MEAF6Q9HAF1 191 aa13.93□□□□□ -0.18
CSNK1E-210ENST00000442216 AGPAT4Q9NRZ5 378 aa13.93□□□□□ -0.18
CSNK1E-210ENST00000442216 ANKRD10Q9NXR5 420 aa13.93□□□□□ -0.18
CSNK1E-210ENST00000442216 MAPRE3Q9UPY8 281 aa13.93□□□□□ -0.18
CSNK1E-210ENST00000442216 EIF3LQ9Y262 564 aaKnown RBP13.93□□□□□ -0.18
CSNK1E-210ENST00000442216 SMG1Q96Q15 3661 aaKnown RBP13.92□□□□□ -0.18
CSNK1E-210ENST00000442216 C2orf92A0A1B0GVN3 265 aa13.92□□□□□ -0.18
CSNK1E-210ENST00000442216 TRPC5OSA6NMA1 111 aa13.92□□□□□ -0.18
CSNK1E-210ENST00000442216 A8MVJ9 347 aa13.92□□□□□ -0.18
CSNK1E-210ENST00000442216 PLOD3O60568 738 aa13.92□□□□□ -0.18
CSNK1E-210ENST00000442216 SLC25A12O75746 678 aa13.92□□□□□ -0.18
CSNK1E-210ENST00000442216 RASAL1O95294 804 aa13.92□□□□□ -0.18
CSNK1E-210ENST00000442216 JUNP05412 331 aaKnown RBP13.92□□□□□ -0.18
CSNK1E-210ENST00000442216 SOX18P35713 384 aa13.92□□□□□ -0.18
CSNK1E-210ENST00000442216 IL23RQ5VWK5 629 aa13.92□□□□□ -0.18
CSNK1E-210ENST00000442216 HLA-DQA1Q5Y7H0 255 aa13.92□□□□□ -0.18
CSNK1E-210ENST00000442216 FAM180BQ6P0A1 224 aa13.92□□□□□ -0.18
CSNK1E-210ENST00000442216 FAM111BQ6SJ93 734 aa13.92□□□□□ -0.18
CSNK1E-210ENST00000442216 ZNF227Q86WZ6 799 aa13.92□□□□□ -0.18
CSNK1E-210ENST00000442216 CYP4Z2PQ8N1L4 340 aa13.92□□□□□ -0.18
CSNK1E-210ENST00000442216 LIX1Q8N485 282 aa13.92□□□□□ -0.18
CSNK1E-210ENST00000442216 NATD1Q8N6N6 113 aa13.92□□□□□ -0.18
CSNK1E-210ENST00000442216 ZNF441Q8N8Z8 693 aa13.92□□□□□ -0.18
CSNK1E-210ENST00000442216 DNAJB8Q8NHS0 232 aa13.92□□□□□ -0.18
CSNK1E-210ENST00000442216 C16orf52Q8NHV5 167 aa13.92□□□□□ -0.18
CSNK1E-210ENST00000442216 ZNF75CPQ92670 426 aaPredicted RBP13.92□□□□□ -0.18
CSNK1E-210ENST00000442216 ADIPOR1Q96A54 375 aa13.92□□□□□ -0.18
CSNK1E-210ENST00000442216 SGCZQ96LD1 299 aa13.92□□□□□ -0.18
CSNK1E-210ENST00000442216 LIN28AQ9H9Z2 209 aaKnown RBP13.92□□□□□ -0.18
CSNK1E-210ENST00000442216 PNPOQ9NVS9 261 aa13.92□□□□□ -0.18
CSNK1E-210ENST00000442216 HPF1Q9NWY4 346 aa13.92□□□□□ -0.18
CSNK1E-210ENST00000442216 NOP53Q9NZM5 478 aaKnown RBP13.92□□□□□ -0.18
CSNK1E-210ENST00000442216 PRODH2Q9UF12 536 aa13.92□□□□□ -0.18
CSNK1E-210ENST00000442216 BAIAP2L1Q9UHR4 511 aa13.92□□□□□ -0.18
CSNK1E-210ENST00000442216 A0A087WV62 115 aa13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 PLOD2O00469 737 aa13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 HDAC3O15379 428 aa13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 NME2P1O60361 137 aa13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 NADKO95544 446 aaPredicted RBP13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 CBX7O95931 251 aa13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 CRYABP02511 175 aaKnown RBP13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 NME2P22392 152 aa13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 SOX3P41225 446 aa13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 FRKP42685 505 aaPredicted RBP13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 NCBP2P52298 156 aaKnown RBP eCLIP13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 C21orf58P58505 322 aa13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 DCAF7P61962 342 aa13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 PRSS53Q2L4Q9 553 aa13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 TRMT12Q53H54 448 aaKnown RBP13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 FAM180AQ6UWF9 173 aa13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 ATCAYQ86WG3 371 aa13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 TAGAPQ8N103 731 aa13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 BCORP1Q8N888 145 aa13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 GOLM1Q8NBJ4 401 aa13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 FAM98AQ8NCA5 519 aaKnown RBP13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 GALNT11Q8NCW6 608 aa13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 ADCY4Q8NFM4 1077 aa13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 DOK4Q8TEW6 326 aa13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 FAR1Q8WVX9 515 aa13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 PPCDCQ96CD2 204 aa13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 NUF2Q9BZD4 464 aa13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 AKTIPQ9H8T0 292 aa13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 TIMMDC1Q9NPL8 285 aa13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 ASF1BQ9NVP2 202 aa13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 GIMAP2Q9UG22 337 aa13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 ATP6V1HQ9UI12 483 aa13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 ERVK-11Q9UQG0 969 aa13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 KLF13Q9Y2Y9 288 aaPredicted RBP13.91□□□□□ -0.18
CSNK1E-210ENST00000442216 UQCRHLA0A096LP55 91 aa13.9□□□□□ -0.18
CSNK1E-210ENST00000442216 ASPDHA6ND91 283 aa13.9□□□□□ -0.18
CSNK1E-210ENST00000442216 CAPN14A8MX76 684 aa13.9□□□□□ -0.18
CSNK1E-210ENST00000442216 KLRC4-KLRK1H3BQV0 150 aa13.9□□□□□ -0.18
CSNK1E-210ENST00000442216 SCAMP2O15127 329 aaKnown RBP13.9□□□□□ -0.18
CSNK1E-210ENST00000442216 PDPK1O15530 556 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms