RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 PRICKLE4Q2TBC4 344 aa14.88□□□□□ -0.03
MCF2L-217ENST00000441756 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.88□□□□□ -0.03
MCF2L-217ENST00000441756 GCNT6Q5T4J0 391 aa14.88□□□□□ -0.03
MCF2L-217ENST00000441756 MLIPQ5VWP3 458 aa14.88□□□□□ -0.03
MCF2L-217ENST00000441756 CALHM3Q86XJ0 350 aa14.88□□□□□ -0.03
MCF2L-217ENST00000441756 RNF130Q86XS8 419 aa14.88□□□□□ -0.03
MCF2L-217ENST00000441756 OR2L13Q8N349 312 aa14.88□□□□□ -0.03
MCF2L-217ENST00000441756 ESX1Q8N693 406 aa14.88□□□□□ -0.03
MCF2L-217ENST00000441756 GALNT6Q8NCL4 622 aa14.88□□□□□ -0.03
MCF2L-217ENST00000441756 ADCY4Q8NFM4 1077 aa14.88□□□□□ -0.03
MCF2L-217ENST00000441756 JADE3Q92613 823 aa14.88□□□□□ -0.03
MCF2L-217ENST00000441756 KAT2AQ92830 837 aa14.88□□□□□ -0.03
MCF2L-217ENST00000441756 POP5Q969H6 163 aaKnown RBP14.88□□□□□ -0.03
MCF2L-217ENST00000441756 TRIM8Q9BZR9 551 aa14.88□□□□□ -0.03
MCF2L-217ENST00000441756 IKZF5Q9H5V7 419 aa14.88□□□□□ -0.03
MCF2L-217ENST00000441756 POLR1BQ9H9Y6 1135 aa14.88□□□□□ -0.03
MCF2L-217ENST00000441756 CXorf21Q9HAI6 301 aa14.88□□□□□ -0.03
MCF2L-217ENST00000441756 NECTIN3Q9NQS3 549 aa14.88□□□□□ -0.03
MCF2L-217ENST00000441756 PADI1Q9ULC6 663 aa14.88□□□□□ -0.03
MCF2L-217ENST00000441756 C19orf53Q9UNZ5 99 aaPredicted RBP14.88□□□□□ -0.03
MCF2L-217ENST00000441756 POMPQ9Y244 141 aa14.88□□□□□ -0.03
MCF2L-217ENST00000441756 SNX13Q9Y5W8 968 aa14.88□□□□□ -0.03
MCF2L-217ENST00000441756 EP300Q09472 2414 aaPredicted RBP14.88□□□□□ -0.03
MCF2L-217ENST00000441756 IDSB3KWA1 339 aa14.87□□□□□ -0.03
MCF2L-217ENST00000441756 TGFBR3LH3BV60 316 aa14.87□□□□□ -0.03
MCF2L-217ENST00000441756 TNFSF15O95150 251 aa14.87□□□□□ -0.03
MCF2L-217ENST00000441756 AGR2O95994 175 aa14.87□□□□□ -0.03
MCF2L-217ENST00000441756 TNNI3P19429 210 aa14.87□□□□□ -0.03
MCF2L-217ENST00000441756 RBMS1P29558 406 aaKnown RBP14.87□□□□□ -0.03
MCF2L-217ENST00000441756 SLC5A2P31639 672 aa14.87□□□□□ -0.03
MCF2L-217ENST00000441756 PRKAG1P54619 331 aa14.87□□□□□ -0.03
MCF2L-217ENST00000441756 DSTNP60981 165 aa14.87□□□□□ -0.03
MCF2L-217ENST00000441756 NCF4Q15080 339 aa14.87□□□□□ -0.03
MCF2L-217ENST00000441756 MRPL14Q6P1L8 145 aaKnown RBP14.87□□□□□ -0.03
MCF2L-217ENST00000441756 ZCCHC12Q6PEW1 402 aa14.87□□□□□ -0.03
MCF2L-217ENST00000441756 FAM198BQ6UWH4 519 aa14.87□□□□□ -0.03
MCF2L-217ENST00000441756 ZNF517Q6ZMY9 492 aaPredicted RBP14.87□□□□□ -0.03
MCF2L-217ENST00000441756 PROSER1Q86XN7 944 aa14.87□□□□□ -0.03
MCF2L-217ENST00000441756 PTRH1Q86Y79 214 aaKnown RBP14.87□□□□□ -0.03
MCF2L-217ENST00000441756 PRSS58Q8IYP2 241 aa14.87□□□□□ -0.03
MCF2L-217ENST00000441756 MICU2Q8IYU8 434 aa14.87□□□□□ -0.03
MCF2L-217ENST00000441756 CLEC4FQ8N1N0 589 aa14.87□□□□□ -0.03
MCF2L-217ENST00000441756 C11orf65Q8NCR3 313 aa14.87□□□□□ -0.03
MCF2L-217ENST00000441756 OR7G2Q8NG99 324 aa14.87□□□□□ -0.03
MCF2L-217ENST00000441756 OR14A16Q8NHC5 309 aa14.87□□□□□ -0.03
MCF2L-217ENST00000441756 MIPOL1Q8TD10 442 aa14.87□□□□□ -0.03
MCF2L-217ENST00000441756 DAZLQ92904 295 aaKnown RBP14.87□□□□□ -0.03
MCF2L-217ENST00000441756 PMEPA1Q969W9 287 aa14.87□□□□□ -0.03
MCF2L-217ENST00000441756 MAGED4Q96JG8 741 aa14.87□□□□□ -0.03
MCF2L-217ENST00000441756 LRGUKQ96M69 825 aa14.87□□□□□ -0.03
MCF2L-217ENST00000441756 ZNF583Q96ND8 569 aa14.87□□□□□ -0.03
MCF2L-217ENST00000441756 CRB3Q9BUF7 120 aa14.87□□□□□ -0.03
MCF2L-217ENST00000441756 CHST8Q9H2A9 424 aa14.87□□□□□ -0.03
MCF2L-217ENST00000441756 ACTR3BQ9P1U1 418 aa14.87□□□□□ -0.03
MCF2L-217ENST00000441756 PACSIN3Q9UKS6 424 aa14.87□□□□□ -0.03
MCF2L-217ENST00000441756 CLCA3PQ9Y6N3 262 aa14.87□□□□□ -0.03
MCF2L-217ENST00000441756 SPTBP11277 2137 aa14.87□□□□□ -0.03
MCF2L-217ENST00000441756 PCNX2A6NKB5 2137 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 TTC36A6NLP5 189 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 DUXAA6NLW8 204 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 C9orf172C9J069 976 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 UPK1AO00322 258 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 ASNA1O43681 348 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 BRINP1O60477 761 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 PRAMEF2O60811 474 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 RAB40ALP0C0E4 278 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 BMP2P12643 396 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 EMP2P54851 167 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 GABREP78334 506 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 MRPS35P82673 323 aaKnown RBP14.86□□□□□ -0.03
MCF2L-217ENST00000441756 GNA13Q14344 377 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 ZNHIT3Q15649 155 aaPredicted RBP14.86□□□□□ -0.03
MCF2L-217ENST00000441756 ZNF630Q2M218 657 aaPredicted RBP14.86□□□□□ -0.03
MCF2L-217ENST00000441756 VMACQ2NL98 169 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 MTX3Q5HYI7 312 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 INTS11Q5TA45 600 aaKnown RBP14.86□□□□□ -0.03
MCF2L-217ENST00000441756 DHFR2Q86XF0 187 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 TMEM151BQ8IW70 566 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 METTL25Q8N6Q8 603 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 OR7G1Q8NGA0 311 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 STMN2Q93045 179 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 TSLPQ969D9 159 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 PPWD1Q96BP3 646 aaKnown RBP14.86□□□□□ -0.03
MCF2L-217ENST00000441756 CTHRC1Q96CG8 243 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 RNF31Q96EP0 1072 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 SPSB2Q99619 263 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 ACTRT3Q9BYD9 372 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 PIF1Q9H611 641 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 TMEM38AQ9H6F2 299 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 SOX17Q9H6I2 414 aaPredicted RBP14.86□□□□□ -0.03
MCF2L-217ENST00000441756 PNO1Q9NRX1 252 aaKnown RBP14.86□□□□□ -0.03
MCF2L-217ENST00000441756 C3orf18Q9UK00 162 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 CFL2Q9Y281 166 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 ZNF451Q9Y4E5 1061 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 PCDHGB3Q9Y5G1 929 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 CLDN16Q9Y5I7 305 aa14.86□□□□□ -0.03
MCF2L-217ENST00000441756 MYOCOSA0A1B0GUC4 107 aa14.85□□□□□ -0.03
MCF2L-217ENST00000441756 C17orf105B2RV13 164 aa14.85□□□□□ -0.03
MCF2L-217ENST00000441756 ARPC2O15144 300 aa14.85□□□□□ -0.03
MCF2L-217ENST00000441756 ALOX12BO75342 701 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms