RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 GMPPBQ9Y5P6 360 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 COMMD3-BMI1R4GMX3 469 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 LAMA3Q16787 3333 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 DSPPQ9NZW4 1301 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 A0A087WV62 115 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 FAAHO00519 579 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 SRPX2O60687 465 aaPredicted RBP12.38□□□□□ -0.43
CPSF4-206ENST00000441580 MITFO75030 526 aaPredicted RBP12.38□□□□□ -0.43
CPSF4-206ENST00000441580 ATP1B1P05026 303 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 CHRM4P08173 479 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 C8orf89P0DMQ9 161 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 PORP16435 677 aaPredicted RBP12.38□□□□□ -0.43
CPSF4-206ENST00000441580 TYRP1P17643 537 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 TNFRSF1BP20333 461 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 MLLT3P42568 568 aaPredicted RBP12.38□□□□□ -0.43
CPSF4-206ENST00000441580 OR1E2P47887 323 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 LIMS1P48059 325 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 XKP51811 444 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 AFF3P51826 1226 aaKnown RBP12.38□□□□□ -0.43
CPSF4-206ENST00000441580 PRKAG1P54619 331 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 VSX2P58304 361 aaPredicted RBP12.38□□□□□ -0.43
CPSF4-206ENST00000441580 PPP1CAP62136 330 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 SHC2P98077 582 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 IL5RAQ01344 420 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 IL1RL1Q01638 556 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 TEKQ02763 1124 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 CD47Q08722 323 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 FUT5Q11128 374 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 RUNX2Q13950 521 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 LAPTM4AQ15012 233 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 EXOC3L2Q2M3D2 409 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 PRTGQ2VWP7 1150 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 FAM214AQ32MH5 1076 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 CNPY1Q3B7I2 92 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 GARNL3Q5VVW2 1013 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 MFSD12Q6NUT3 480 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 CDC73Q6P1J9 531 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 C16orf62Q7Z3J2 963 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 GPR141Q7Z602 305 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 GALNT5Q7Z7M9 940 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 SFTPA2Q8IWL1 248 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 CA13Q8N1Q1 262 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 PARP8Q8N3A8 854 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 GPR32P1Q8NGA4 272 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 ZNF675Q8TD23 568 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 XAGE5Q8WWM1 108 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 DNASE2BQ8WZ79 361 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 NCSTNQ92542 709 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 DGCR14Q96DF8 476 aaKnown RBP12.38□□□□□ -0.43
CPSF4-206ENST00000441580 BARD1Q99728 777 aaKnown RBP12.38□□□□□ -0.43
CPSF4-206ENST00000441580 RAB33BQ9H082 229 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 DUSP15Q9H1R2 295 aaPredicted RBP12.38□□□□□ -0.43
CPSF4-206ENST00000441580 PTTG2Q9NZH5 202 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 SLC13A4Q9UKG4 626 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 NDRG4Q9ULP0 352 aaKnown RBP12.38□□□□□ -0.43
CPSF4-206ENST00000441580 MRPS33Q9Y291 106 aaKnown RBP12.38□□□□□ -0.43
CPSF4-206ENST00000441580 SH3GLB1Q9Y371 365 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 NAALAD2Q9Y3Q0 740 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 PCDHGA8Q9Y5G5 932 aa12.38□□□□□ -0.43
CPSF4-206ENST00000441580 REV3LO60673 3130 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 PRAMEF25A6NGN4 478 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 ZNF860A6NHJ4 632 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 WASHC1A8K0Z3 465 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 K7ESF4 209 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 SLC1A7O00341 560 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 ABCB7O75027 752 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 COQ9O75208 318 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 UGT2B17O75795 530 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 PIAS2O75928 621 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 CPNE6O95741 557 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 RECKO95980 971 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 AK1P00568 194 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 ADAP00813 363 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 ALPPP05187 535 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 ALPPL2P10696 532 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 IL7RP16871 459 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 CRHBPP24387 322 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 ELK4P28324 431 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 HMGA2P52926 109 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 CDH15P55291 814 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 CXCR4P61073 352 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 SIM1P81133 766 aaPredicted RBP12.37□□□□□ -0.43
CPSF4-206ENST00000441580 NPRL3Q12980 569 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 RAPSNQ13702 412 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 LTB4RQ15722 352 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 SYPL1Q16563 259 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 ZNF750Q32MQ0 723 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 GPAT3Q53EU6 434 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 ZNF628Q5EBL2 1059 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 C6orf141Q5SZD1 244 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 ZCCHC12Q6PEW1 402 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 OGFOD3Q6PK18 319 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 RBM44Q6ZP01 1051 aaKnown RBP12.37□□□□□ -0.43
CPSF4-206ENST00000441580 DGLUCYQ7Z3D6 616 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 LINC00471Q8N535 108 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 DEFB119Q8N690 84 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 C1orf216Q8TAB5 229 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 ADAMTS15Q8TE58 950 aa12.37□□□□□ -0.43
CPSF4-206ENST00000441580 GIMAP5Q96F15 307 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms