RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 TIMM22Q9Y584 194 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 DNAJC15Q9Y5T4 150 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 KIR2DS5A0A0G2JLQ3 304 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 A0A0G2JND7 137 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 A0A0G2JNG1 304 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 GOLGA8QA0A0J9YX86 632 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 GOLGA8OA6NCC3 632 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 OR5K4A6NMS3 321 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 IDSB3KWA1 339 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 GOLGA8NF8WBI6 632 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 KIR2DS3K7RE56 304 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 NDUFAB1O14561 156 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 AZIN1O14977 448 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 PIP5K1BO14986 540 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 HDAC3O15379 428 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 GPR42O15529 346 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 ARHGEF9O43307 516 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 RRP9O43818 475 aaKnown RBP4.48□□□□□ -1.69
PTPN4-206ENST00000441089 CRLF1O75462 422 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 SCRG1O75711 98 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 MLYCDO95822 493 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 OTCP00480 354 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 VIPP01282 170 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 RPN2P04844 631 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 CAPN1P07384 714 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 FGF4P08620 206 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 CHRM5P08912 532 aaPredicted RBP4.48□□□□□ -1.69
PTPN4-206ENST00000441089 EBLN1P0CF75 366 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 CDH1P12830 882 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 NELFEP18615 380 aaKnown RBP4.48□□□□□ -1.69
PTPN4-206ENST00000441089 NDUFS1P28331 727 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 OTX2P32243 289 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 ECI1P42126 302 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 CASP2P42575 452 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 CCNG1P51959 295 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 ARFIP2P53365 341 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 AQP5P55064 265 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 GFERP55789 205 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 NAA20P61599 178 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 PPP1CAP62136 330 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 MEF2AQ02078 507 aaPredicted RBP4.48□□□□□ -1.69
PTPN4-206ENST00000441089 AIMP2Q13155 320 aaKnown RBP4.48□□□□□ -1.69
PTPN4-206ENST00000441089 CHIT1Q13231 466 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 TSTA3Q13630 321 aaPredicted RBP4.48□□□□□ -1.69
PTPN4-206ENST00000441089 DOC2AQ14183 400 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 KCNAB1Q14722 419 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 KIR2DS5Q14953 304 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 PDCD2Q16342 344 aaPredicted RBP4.48□□□□□ -1.69
PTPN4-206ENST00000441089 RBBP7Q16576 425 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 DEFB113Q30KQ7 82 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 GGTA1PQ4G0N0 100 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 XKR7Q5GH72 579 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 CACHD1Q5VU97 1274 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 GRHL2Q6ISB3 625 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 CAPN13Q6MZZ7 669 aaPredicted RBP4.48□□□□□ -1.69
PTPN4-206ENST00000441089 HMBOX1Q6NT76 420 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 TTC23LQ6PF05 361 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 EPGNQ6UW88 154 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 LCTLQ6UWM7 567 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 C16orf47Q6ZP98 133 aaPredicted RBP4.48□□□□□ -1.69
PTPN4-206ENST00000441089 TMEM26Q6ZUK4 368 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 MILR1Q7Z6M3 343 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 TMPRSS11BQ86T26 416 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 TRIM73Q86UV7 250 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 AMIGO1Q86WK6 493 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 TMEM126BQ8IUX1 230 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 CLYBLQ8N0X4 340 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 RNF175Q8N4F7 328 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 L3MBTL4Q8NA19 623 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 ZNF740Q8NDX6 193 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 OR2A1Q8NGT9 310 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 OR2T11Q8NH01 316 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 GOT1L1Q8NHS2 421 aaPredicted RBP4.48□□□□□ -1.69
PTPN4-206ENST00000441089 MAGEC3Q8TD91 643 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 ADAMTS18Q8TE60 1221 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 PHF10Q8WUB8 498 aaKnown RBP4.48□□□□□ -1.69
PTPN4-206ENST00000441089 TWIST2Q8WVJ9 160 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 SLC5A11Q8WWX8 675 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 SREK1Q8WXA9 508 aaKnown RBP4.48□□□□□ -1.69
PTPN4-206ENST00000441089 SMPDL3AQ92484 453 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 WDR34Q96EX3 536 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 ZDHHC12Q96GR4 267 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 C1orf159Q96HA4 380 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 MAGED4Q96JG8 741 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 MAGEB10Q96LZ2 347 aaPredicted RBP4.48□□□□□ -1.69
PTPN4-206ENST00000441089 PPM1MQ96MI6 270 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 TGM7Q96PF1 710 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 OR2A14Q96R47 310 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 OR52B2Q96RD2 323 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 HBEGFQ99075 208 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 C17orf62Q9BQA9 187 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 ACAT2Q9BWD1 397 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 TBC1D10AQ9BXI6 508 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 NUF2Q9BZD4 464 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 NSRP1Q9H0G5 558 aaKnown RBP4.48□□□□□ -1.69
PTPN4-206ENST00000441089 WDR55Q9H6Y2 383 aaPredicted RBP4.48□□□□□ -1.69
PTPN4-206ENST00000441089 UCK1Q9HA47 277 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 MEAF6Q9HAF1 191 aa4.48□□□□□ -1.69
PTPN4-206ENST00000441089 EML4Q9HC35 981 aaKnown RBP4.48□□□□□ -1.69
PTPN4-206ENST00000441089 ZBTB20Q9HC78 741 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms