RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 PDE7BQ9NP56 450 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 MRPL17Q9NRX2 175 aaKnown RBP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 SPATS2LQ9NUQ6 558 aaKnown RBP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 ADA2Q9NZK5 511 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 CD274Q9NZQ7 290 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 CCDC167Q9P0B6 97 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 C6orf203Q9P0P8 240 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 EPS15L1Q9UBC2 864 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 GALPQ9UBC7 116 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 LSM7Q9UK45 103 aaKnown RBP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 IKZF3Q9UKT9 509 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 PROCRQ9UNN8 238 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 ICKQ9UPZ9 632 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 B3GNT3Q9Y2A9 372 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 NDUFAF1Q9Y375 327 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 PKP3Q9Y446 797 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 MTF2Q9Y483 593 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 ASB3Q9Y575 518 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 OR51B4Q9Y5P0 310 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 INSL5Q9Y5Q6 135 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 DNAJC15Q9Y5T4 150 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 CPQQ9Y646 472 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 TDRD15B5MCY1 1934 aaKnown RBP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 PLXNA3P51805 1871 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 CASP8AP2Q9UKL3 1982 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 TEX13CA0A0J9YWL9 993 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 A0A0J9YYE9 177 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 CXorf51AA0A1B0GTR3 108 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 PRSS51A0A1B0GVH4 220 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 ATP6AP2A0A1C7CYW4 349 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 A0A1W2PQ09 198 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 NCF1BA6NI72 391 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 EIF4E1BA6NMX2 242 aaKnown RBP3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 C4orf47A7E2U8 309 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 BBIP1A8MTZ0 92 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 NCF1CA8MVU1 366 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 E5RI56 91 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 FBP2O00757 339 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 PRMT5O14744 637 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 MRASO14807 208 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 TNFRSF13BO14836 293 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 ANGPT2O15123 496 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 TEX28O15482 410 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 DENRO43583 198 aaKnown RBP3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 OR1I1O60431 355 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 SOCS5O75159 536 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 NIPSNAP2O75323 286 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 ATP6AP2O75787 350 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 CSPG5O95196 566 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 SIX3O95343 332 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 IGSF6O95976 241 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 TRBC1P01850 177 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 LYNP07948 512 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 CHRM4P08173 479 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 RPS17P08708 135 aaKnown RBP3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 ALDOCP09972 364 aaKnown RBP3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 LINC00032P0C843 101 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 UBTFL6P0CB48 400 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 HSPA8P11142 646 aaKnown RBP3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 NCF1P14598 390 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 HOXB2P14652 356 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 IDO1P14902 403 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 ZNF7P17097 686 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 CTPS1P17812 591 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 VCLP18206 1134 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 CD72P21854 359 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 DGKAP23743 735 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 GABRR2P28476 465 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 CA8P35219 290 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 HMGCLP35914 325 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 MRPL19P49406 292 aaKnown RBP3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 RGS4P49798 205 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 PPP5CP53041 499 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 FOXA1P55317 472 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 SLC7A9P82251 487 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 MRPS22P82650 360 aaKnown RBP3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 SHC2P98077 582 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 BCL2L1Q07817 233 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 PMPCAQ10713 525 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 LCP2Q13094 533 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 AIMP2Q13155 320 aaKnown RBP3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 MED21Q13503 144 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 SCARB2Q14108 478 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 IL13RA2Q14627 380 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 TSNQ15631 228 aaKnown RBP3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 RBBP7Q16576 425 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 PPP1R3AQ16821 1122 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 LRRC36Q1X8D7 754 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 KIF19Q2TAC6 998 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 AP5B1Q2VPB7 878 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 ZNF585BQ52M93 769 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 SFT2D3Q587I9 215 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 COQ5Q5HYK3 327 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 Q5PR19 223 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 SAMD4BQ5PRF9 694 aaKnown RBP3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 RARS2Q5T160 578 aaKnown RBP3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 MPP7Q5T2T1 576 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 TXNDC8Q6A555 127 aa3.27□□□□□ -1.89
HMGB3P11-201ENST00000440127 PTRHD1Q6GMV3 140 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms