RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 PDE7AQ13946 482 aa10.95□□□□□ -0.66
HSPG2-206ENST00000439717 EBPQ15125 230 aaKnown RBP10.95□□□□□ -0.66
HSPG2-206ENST00000439717 ZNF628Q5EBL2 1059 aa10.95□□□□□ -0.66
HSPG2-206ENST00000439717 ZNF468Q5VIY5 522 aaPredicted RBP10.95□□□□□ -0.66
HSPG2-206ENST00000439717 IL23RQ5VWK5 629 aa10.95□□□□□ -0.66
HSPG2-206ENST00000439717 SPINK14Q6IE38 97 aa10.95□□□□□ -0.66
HSPG2-206ENST00000439717 FAM180BQ6P0A1 224 aa10.95□□□□□ -0.66
HSPG2-206ENST00000439717 OPN5Q6U736 354 aa10.95□□□□□ -0.66
HSPG2-206ENST00000439717 DND1Q8IYX4 353 aaKnown RBP10.95□□□□□ -0.66
HSPG2-206ENST00000439717 FAM9CQ8IZT9 166 aa10.95□□□□□ -0.66
HSPG2-206ENST00000439717 LIX1Q8N485 282 aa10.95□□□□□ -0.66
HSPG2-206ENST00000439717 TMEM178AQ8NBL3 297 aa10.95□□□□□ -0.66
HSPG2-206ENST00000439717 C17orf47Q8NEP4 570 aa10.95□□□□□ -0.66
HSPG2-206ENST00000439717 SLC22A8Q8TCC7 542 aa10.95□□□□□ -0.66
HSPG2-206ENST00000439717 DOK4Q8TEW6 326 aa10.95□□□□□ -0.66
HSPG2-206ENST00000439717 DYDC1Q8WWB3 177 aa10.95□□□□□ -0.66
HSPG2-206ENST00000439717 ASB15Q8WXK1 588 aa10.95□□□□□ -0.66
HSPG2-206ENST00000439717 TMEM125Q96AQ2 219 aa10.95□□□□□ -0.66
HSPG2-206ENST00000439717 MIB2Q96AX9 1013 aa10.95□□□□□ -0.66
HSPG2-206ENST00000439717 SNRNP40Q96DI7 357 aaKnown RBP10.95□□□□□ -0.66
HSPG2-206ENST00000439717 SCMH1Q96GD3 660 aa10.95□□□□□ -0.66
HSPG2-206ENST00000439717 C5orf34Q96MH7 638 aa10.95□□□□□ -0.66
HSPG2-206ENST00000439717 RASL10BQ96S79 203 aa10.95□□□□□ -0.66
HSPG2-206ENST00000439717 NUF2Q9BZD4 464 aa10.95□□□□□ -0.66
HSPG2-206ENST00000439717 AKTIPQ9H8T0 292 aa10.95□□□□□ -0.66
HSPG2-206ENST00000439717 LIN28AQ9H9Z2 209 aaKnown RBP10.95□□□□□ -0.66
HSPG2-206ENST00000439717 MEAF6Q9HAF1 191 aa10.95□□□□□ -0.66
HSPG2-206ENST00000439717 ZNF446Q9NWS9 450 aa10.95□□□□□ -0.66
HSPG2-206ENST00000439717 NOP53Q9NZM5 478 aaKnown RBP10.95□□□□□ -0.66
HSPG2-206ENST00000439717 PRODH2Q9UF12 536 aa10.95□□□□□ -0.66
HSPG2-206ENST00000439717 GIMAP2Q9UG22 337 aa10.95□□□□□ -0.66
HSPG2-206ENST00000439717 BAIAP2L1Q9UHR4 511 aa10.95□□□□□ -0.66
HSPG2-206ENST00000439717 COPG1Q9Y678 874 aaKnown RBP10.95□□□□□ -0.66
HSPG2-206ENST00000439717 SPENQ96T58 3664 aaKnown RBP10.95□□□□□ -0.66
HSPG2-206ENST00000439717 C2orf92A0A1B0GVN3 265 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 TRPC5OSA6NMA1 111 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 A8MVJ9 347 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 J3QKU1 62 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 HDAC3O15379 428 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 SLC25A12O75746 678 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 SP1P08047 785 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 IFI6P09912 130 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 PCSK2P16519 638 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 HPCAL1P37235 193 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 NCBP2P52298 156 aaKnown RBP eCLIP10.94□□□□□ -0.66
HSPG2-206ENST00000439717 FOXK1P85037 733 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 LTB4RQ15722 352 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 PRSS53Q2L4Q9 553 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 HLA-DQA1Q5Y7H0 255 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 SLC25A25Q6KCM7 469 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 FAM111BQ6SJ93 734 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 C16orf47Q6ZP98 133 aaPredicted RBP10.94□□□□□ -0.66
HSPG2-206ENST00000439717 TAGAPQ8N103 731 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 CYP4Z2PQ8N1L4 340 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 CISD2Q8N5K1 135 aaKnown RBP10.94□□□□□ -0.66
HSPG2-206ENST00000439717 NATD1Q8N6N6 113 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 ZNF441Q8N8Z8 693 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 ADCY4Q8NFM4 1077 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 OR9A2Q8NGT5 310 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 CLHC1Q8NHS4 586 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 C16orf52Q8NHV5 167 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 PIWIL2Q8TC59 973 aaKnown RBP10.94□□□□□ -0.66
HSPG2-206ENST00000439717 LRRC8CQ8TDW0 803 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 GFM2Q969S9 779 aaKnown RBP10.94□□□□□ -0.66
HSPG2-206ENST00000439717 PPCDCQ96CD2 204 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 SGCZQ96LD1 299 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 GAL3ST4Q96RP7 486 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 BARD1Q99728 777 aaKnown RBP10.94□□□□□ -0.66
HSPG2-206ENST00000439717 C1orf50Q9BV19 199 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 AGPAT4Q9NRZ5 378 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 INTS9Q9NV88 658 aaKnown RBP10.94□□□□□ -0.66
HSPG2-206ENST00000439717 HPF1Q9NWY4 346 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 BCAP29Q9UHQ4 241 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 ATP6V1HQ9UI12 483 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 MAPRE3Q9UPY8 281 aa10.94□□□□□ -0.66
HSPG2-206ENST00000439717 A0A087WV62 115 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 PLOD2O00469 737 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 SCAMP2O15127 329 aaKnown RBP10.93□□□□□ -0.66
HSPG2-206ENST00000439717 PDPK1O15530 556 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 ATP8B1O43520 1251 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 AKAP10O43572 662 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 NME2P1O60361 137 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 PLOD3O60568 738 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 OR6B1O95007 311 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 LRATO95237 230 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 RASAL1O95294 804 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 NADKO95544 446 aaPredicted RBP10.93□□□□□ -0.66
HSPG2-206ENST00000439717 CBX7O95931 251 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 LBPP18428 481 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 PRPS1L1P21108 318 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 NME2P22392 152 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 SOX18P35713 384 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 SOX3P41225 446 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 FRKP42685 505 aaPredicted RBP10.93□□□□□ -0.66
HSPG2-206ENST00000439717 ST13P50502 369 aaKnown RBP10.93□□□□□ -0.66
HSPG2-206ENST00000439717 CLDN8P56748 225 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 C21orf58P58505 322 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 DCAF7P61962 342 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 MRPS35P82673 323 aaKnown RBP10.93□□□□□ -0.66
HSPG2-206ENST00000439717 PTGR1Q14914 329 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms