RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 DCDC2Q9UHG0 476 aa12.75□□□□□ -0.37
PRAME-209ENST00000439106 CHCHD2Q9Y6H1 151 aaPredicted RBP12.75□□□□□ -0.37
PRAME-209ENST00000439106 APCP25054 2843 aa12.75□□□□□ -0.37
PRAME-209ENST00000439106 NPIPA2E9PIF3 369 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 NPIPA3F8WFD2 350 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 PCDH7O60245 1069 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 ULK1O75385 1050 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 NME6O75414 186 aaPredicted RBP12.74□□□□□ -0.37
PRAME-209ENST00000439106 FBXO45P0C2W1 286 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 RFPL3SP0C7P2 107 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 PORP16435 677 aaPredicted RBP12.74□□□□□ -0.37
PRAME-209ENST00000439106 S1PR1P21453 382 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 GPX3P22352 226 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 HTR1EP28566 365 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 TNFRSF8P28908 595 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 SERPINB3P29508 390 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 FBXW4P57775 412 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 VSNL1P62760 191 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 KCNJ2P63252 427 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 MRPS35P82673 323 aaKnown RBP12.74□□□□□ -0.37
PRAME-209ENST00000439106 FUT7Q11130 342 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 CSTF3Q12996 717 aaKnown RBP12.74□□□□□ -0.37
PRAME-209ENST00000439106 PRICKLE4Q2TBC4 344 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 EMC4Q5J8M3 183 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 C6orf163Q5TEZ5 329 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 SLC22A10Q63ZE4 541 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 DESI1Q6ICB0 168 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 BNC2Q6ZN30 1099 aaPredicted RBP12.74□□□□□ -0.37
PRAME-209ENST00000439106 SLC22A16Q86VW1 577 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 C7orf57Q8NEG2 295 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 OR5M9Q8NGP3 310 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 PAQR8Q8TEZ7 354 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 MARVELD3Q96A59 401 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 CNRIP1Q96F85 164 aaPredicted RBP12.74□□□□□ -0.37
PRAME-209ENST00000439106 JSRP1Q96MG2 331 aaPredicted RBP12.74□□□□□ -0.37
PRAME-209ENST00000439106 ITPAQ9BY32 194 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 ZDHHC11Q9H8X9 412 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 ANKRA2Q9H9E1 313 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 IL1RL2Q9HB29 575 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 MAT2BQ9NZL9 334 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.74□□□□□ -0.37
PRAME-209ENST00000439106 MCM8Q9UJA3 840 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 ENTPD4Q9Y227 616 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 DLGAP4Q9Y2H0 992 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.74□□□□□ -0.37
PRAME-209ENST00000439106 V9GYY5 206 aaPredicted RBP12.74□□□□□ -0.37
PRAME-209ENST00000439106 MYO9AB2RTY4 2548 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 DOCK7Q96N67 2140 aa12.74□□□□□ -0.37
PRAME-209ENST00000439106 NUP214P35658 2090 aaPredicted RBP12.74□□□□□ -0.37
PRAME-209ENST00000439106 GNG14A0A1W2PPG7 69 aa12.73□□□□□ -0.37
PRAME-209ENST00000439106 GOLGA6L10A6NI86 522 aa12.73□□□□□ -0.37
PRAME-209ENST00000439106 LRRC3CA6NJW4 275 aa12.73□□□□□ -0.37
PRAME-209ENST00000439106 OR6C76A6NM76 312 aa12.73□□□□□ -0.37
PRAME-209ENST00000439106 PLIN3O60664 434 aa12.73□□□□□ -0.37
PRAME-209ENST00000439106 ENO1P06733 434 aaKnown RBP12.73□□□□□ -0.37
PRAME-209ENST00000439106 HSD3B1P14060 373 aa12.73□□□□□ -0.37
PRAME-209ENST00000439106 HSD3B2P26439 372 aa12.73□□□□□ -0.37
PRAME-209ENST00000439106 NAGLUP54802 743 aa12.73□□□□□ -0.37
PRAME-209ENST00000439106 MGAT2Q10469 447 aa12.73□□□□□ -0.37
PRAME-209ENST00000439106 ART3Q13508 389 aa12.73□□□□□ -0.37
PRAME-209ENST00000439106 TRMT12Q53H54 448 aaKnown RBP12.73□□□□□ -0.37
PRAME-209ENST00000439106 HLA-DQA1Q5Y7H0 255 aa12.73□□□□□ -0.37
PRAME-209ENST00000439106 ARHGAP11AQ6P4F7 1023 aa12.73□□□□□ -0.37
PRAME-209ENST00000439106 FRMD7Q6ZUT3 714 aa12.73□□□□□ -0.37
PRAME-209ENST00000439106 VWA5B2Q8N398 1253 aa12.73□□□□□ -0.37
PRAME-209ENST00000439106 FBXW8Q8N3Y1 598 aa12.73□□□□□ -0.37
PRAME-209ENST00000439106 FAM109AQ8N4B1 249 aa12.73□□□□□ -0.37
PRAME-209ENST00000439106 SLC15A4Q8N697 577 aa12.73□□□□□ -0.37
PRAME-209ENST00000439106 EIF1ADQ8N9N8 165 aaKnown RBP12.73□□□□□ -0.37
PRAME-209ENST00000439106 CCDC63Q8NA47 563 aa12.73□□□□□ -0.37
PRAME-209ENST00000439106 CDC26Q8NHZ8 85 aa12.73□□□□□ -0.37
PRAME-209ENST00000439106 ADIPOR1Q96A54 375 aa12.73□□□□□ -0.37
PRAME-209ENST00000439106 EXOSC8Q96B26 276 aaKnown RBP12.73□□□□□ -0.37
PRAME-209ENST00000439106 SDCCAG3Q96C92 435 aa12.73□□□□□ -0.37
PRAME-209ENST00000439106 SMC6Q96SB8 1091 aa12.73□□□□□ -0.37
PRAME-209ENST00000439106 NXF5Q9H1B4 397 aaKnown RBP12.73□□□□□ -0.37
PRAME-209ENST00000439106 ZNF703Q9H7S9 590 aaPredicted RBP12.73□□□□□ -0.37
PRAME-209ENST00000439106 PFDN4Q9NQP4 134 aa12.73□□□□□ -0.37
PRAME-209ENST00000439106 PNPLA3Q9NST1 481 aa12.73□□□□□ -0.37
PRAME-209ENST00000439106 EHD3Q9NZN3 535 aa12.73□□□□□ -0.37
PRAME-209ENST00000439106 BCAP29Q9UHQ4 241 aa12.73□□□□□ -0.37
PRAME-209ENST00000439106 UTS2RQ9UKP6 389 aa12.73□□□□□ -0.37
PRAME-209ENST00000439106 CNOT11Q9UKZ1 510 aaKnown RBP12.73□□□□□ -0.37
PRAME-209ENST00000439106 DCHS2Q6V1P9 2916 aa12.72□□□□□ -0.37
PRAME-209ENST00000439106 TLDC2A0PJX2 215 aa12.72□□□□□ -0.37
PRAME-209ENST00000439106 E9PLN8 166 aa12.72□□□□□ -0.37
PRAME-209ENST00000439106 COPEO14579 308 aa12.72□□□□□ -0.37
PRAME-209ENST00000439106 GUCY1B2O75343 617 aa12.72□□□□□ -0.37
PRAME-209ENST00000439106 CBX7O95931 251 aa12.72□□□□□ -0.37
PRAME-209ENST00000439106 PCSK2P16519 638 aa12.72□□□□□ -0.37
PRAME-209ENST00000439106 KRT4P19013 534 aa12.72□□□□□ -0.37
PRAME-209ENST00000439106 ENDOUP21128 410 aaKnown RBP12.72□□□□□ -0.37
PRAME-209ENST00000439106 TIA1P31483 386 aaKnown RBP eCLIP12.72□□□□□ -0.376e-12■■■■■ 39.4
PRAME-209ENST00000439106 SMSP52788 366 aa12.72□□□□□ -0.37
PRAME-209ENST00000439106 PKNOX1P55347 436 aa12.72□□□□□ -0.37
PRAME-209ENST00000439106 ACSM2AQ08AH3 577 aa12.72□□□□□ -0.37
PRAME-209ENST00000439106 NTRK2Q16620 822 aa12.72□□□□□ -0.37
PRAME-209ENST00000439106 PRSS53Q2L4Q9 553 aa12.72□□□□□ -0.37
PRAME-209ENST00000439106 ACSM2BQ68CK6 577 aa12.72□□□□□ -0.37
PRAME-209ENST00000439106 XKRXQ6PP77 449 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms