RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 NME5P56597 212 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 KRT83P78385 493 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 C17orf67Q0P5P2 114 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 KRTAP21-3Q3LHN1 58 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 FAM106AQ4KMX7 169 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 TAF1BQ53T94 588 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 CAVIN4Q5BKX8 364 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 GLRA4Q5JXX5 417 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 SPINK14Q6IE38 97 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 IYDQ6PHW0 289 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 TMEM270Q6UE05 265 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 NHLRC1Q6VVB1 395 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 MACC1Q6ZN28 852 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 Q71RC1 249 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 KCTD9Q7L273 389 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 ADGRD2Q7Z7M1 963 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 ZBTB44Q8NCP5 570 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 OR5T2Q8NGG2 359 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 SAP25Q8TEE9 199 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 GTF3AQ92664 365 aaKnown RBP2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 CDKN2AIPNLQ96HQ2 116 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 C18orf12Q96KH6 178 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 PANX3Q96QZ0 392 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 IL12RB2Q99665 862 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 PRMT1Q99873 361 aaKnown RBP2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 C17orf62Q9BQA9 187 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 SLC5A7Q9GZV3 580 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 C2orf40Q9H1Z8 148 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 EXOC1Q9NV70 894 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 DNAJC17Q9NVM6 304 aaKnown RBP2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 ARGLU1Q9NWB6 273 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 KLK13Q9UKR3 277 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 SPTA1P02549 2419 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 C2CD3Q4AC94 2353 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 NEDD4P46934 1319 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 LOC285556D6RIA3 1793 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 SDR42E2A6NKP2 422 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 NPIPB9F8W1W9 429 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 SURF4O15260 269 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 B4GAT1O43505 415 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 FMO6PO60774 539 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 LRCH4O75427 683 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 RAD51DO75771 328 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 RPLP0P05388 317 aaKnown RBP2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 UROSP10746 265 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 ZNF10P21506 573 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 GJB2P29033 226 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 PDHA2P29803 388 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 SLC1A3P43003 542 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 OR3A3P47888 321 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 SNU13P55769 128 aaKnown RBP2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 RPP38P78345 283 aaKnown RBP2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 ASIC1P78348 528 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 SRSF9Q13242 221 aaKnown RBP eCLIP2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 LY6DQ14210 128 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 PPA1Q15181 289 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 SF3A2Q15428 464 aaKnown RBP2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 MAPK11Q15759 364 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 SMU1Q2TAY7 513 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 KBTBD12Q3ZCT8 623 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 FASTKD1Q53R41 847 aaKnown RBP2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 LRRC38Q5VT99 294 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 SLC27A4Q6P1M0 643 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 ZER1Q7Z7L7 766 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 SNX32Q86XE0 403 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 AMER3Q8N944 861 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 AQP11Q8NBQ7 271 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 NUP37Q8NFH4 326 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 OR4D10Q8NGI6 311 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 C11orf45Q8TAV5 145 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 SEPT8Q92599 483 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 AGAP3Q96P47 875 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 ZNF300Q96RE9 604 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 ACPTQ9BZG2 426 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 ZNF350Q9GZX5 532 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 HOXD1Q9GZZ0 328 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 POMKQ9H5K3 350 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 TEX10Q9NXF1 929 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 NUDT4Q9NZJ9 180 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 LNPEPQ9UIQ6 1025 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 LIPT1Q9Y234 373 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 TRIOO75962 3097 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 FBN3Q75N90 2809 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 FRYQ5TBA9 3013 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 PIEZO2Q9H5I5 2752 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 CDK5RAP2Q96SN8 1893 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 SIP14410 1827 aa2.75□□□□□ -1.97
HMGB3P12-201ENST00000438745 A0A1B0GUL6 1792 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 ZZEF1O43149 2961 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 GRIN2DO15399 1336 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 MROH5Q6ZUA9 1318 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 SMG1Q96Q15 3661 aaKnown RBP2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 DOCK1Q14185 1865 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 hCG_38984A0A1B0GV85 526 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 C13orf42A0A1B0GVH6 325 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 MAGEB16A2A368 324 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 LRRD1A4D1F6 860 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 SHISA7A6NL88 538 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 C5orf67F2Z3F1 127 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 F5H6K3 240 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms