RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 COL2A1P02458 1487 aaPredicted RBP3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 PCNX3Q9H6A9 2034 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 TRBV2A0A0J9YWF9 115 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 SHISA7A6NL88 538 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 UBXN8O00124 270 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 ANGPT2O15123 496 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 ZNF749O43361 778 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 GMNNO75496 209 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 IGHG1P01857 330 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 FHP07954 510 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 EZRP15311 586 aaKnown RBP3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 GATA1P15976 413 aaPredicted RBP3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 SELEP16581 610 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 CD9P21926 228 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 CCND2P30279 289 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 SPRP35270 261 aaPredicted RBP3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 SLC1A4P43007 532 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 MAGEA4P43358 317 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 RPL34P49207 117 aaKnown RBP3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 SULT1E1P49888 294 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 TNFSF10P50591 281 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 SMSP52788 366 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 UCP2P55851 309 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 PEX3P56589 373 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 PRKCEQ02156 737 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 ACY1Q03154 408 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 GFPT1Q06210 699 aaPredicted RBP3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 CD300CQ08708 224 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 PDE7AQ13946 482 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 DPYSQ14117 519 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 SYCP1Q15431 976 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 CCDC152Q4G0S7 254 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 HIGD2BQ4VC39 106 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 MPPE1Q53F39 396 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 CCDC122Q5T0U0 273 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 LIPJQ5W064 366 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 SEL1L3Q68CR1 1132 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 NEK5Q6P3R8 708 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 MFSD7Q6UXD7 560 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 KDM8Q8N371 416 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 CSNK1G2-AS1Q8NCQ2 148 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 IPMKQ8NFU5 416 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 OR6M1Q8NGM8 313 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 SHC3Q92529 594 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 TAF15Q92804 592 aaKnown RBP eCLIP3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 FAM46BQ96A09 425 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 NABP1Q96AH0 204 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 CNDP1Q96KN2 507 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 RCHY1Q96PM5 261 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 AGPAT1Q99943 283 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 RAB11FIP5Q9BXF6 653 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 WWP1Q9H0M0 922 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 PNNQ9H307 717 aaKnown RBP3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 TMEM245Q9H330 911 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 DPEP3Q9H4B8 488 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 MED4Q9NPJ6 270 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 GDF3Q9NR23 364 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 SLC35D1Q9NTN3 355 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 FANCIQ9NVI1 1328 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 VPS54Q9P1Q0 977 aa3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 BARX2Q9UMQ3 279 aaPredicted RBP3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 STRAPQ9Y3F4 350 aaKnown RBP3.06□□□□□ -1.92
LSM1P1-201ENST00000438629 TRBV5-4A0A0C4DH59 114 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 ARHGAP42A6NI28 874 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 ACOD1A6NK06 481 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 YJEFN3A6XGL0 299 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 SRRM4A7MD48 611 aaKnown RBP3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 F8VZ95 297 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 H0YCG3 227 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 K7EQG2 157 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 KIF2AO00139 706 aaPredicted RBP3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 PI15O43692 258 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 ATP6V1G1O75348 118 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 CSO75390 466 aaKnown RBP3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 CRLF1O75462 422 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 IDH1O75874 414 aaKnown RBP3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 STAMBPO95630 424 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 FGFR1OPO95684 399 aaKnown RBP3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 PAHP00439 452 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 MT-ATP6P00846 226 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 IFNB1P01574 187 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 CHRNGP07510 517 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 APRTP07741 180 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 MBL2P11226 248 aaPredicted RBP3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 PRG2P13727 222 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 ETS1P14921 441 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 ACADSP16219 412 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 CAPN2P17655 700 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 GPX3P22352 226 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 PBLDP30039 288 aaPredicted RBP3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 NSFP46459 744 aaKnown RBP3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 ATP4BP51164 291 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 PRELPP51888 382 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 KRTAP10-6P60371 365 aaPredicted RBP3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 RPS27AP62979 156 aaKnown RBP3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 GSTO1P78417 241 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 SIX1Q15475 284 aaPredicted RBP3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 ZSCAN26Q16670 478 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 CAVIN4Q5BKX8 364 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 AGAP7PQ5VUJ5 663 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms