RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 ZNF778Q96MU6 729 aa9.87□□□□□ -0.83
SHPRH-206ENST00000438092 MAPKAP1Q9BPZ7 522 aa9.87□□□□□ -0.83
SHPRH-206ENST00000438092 C8orf33Q9H7E9 229 aaPredicted RBP9.87□□□□□ -0.83
SHPRH-206ENST00000438092 MVB12BQ9H7P6 319 aa9.87□□□□□ -0.83
SHPRH-206ENST00000438092 ACTR3BQ9P1U1 418 aa9.87□□□□□ -0.83
SHPRH-206ENST00000438092 MATN2O00339 956 aa9.87□□□□□ -0.83
SHPRH-206ENST00000438092 FLRT2O43155 660 aa9.87□□□□□ -0.83
SHPRH-206ENST00000438092 LDB3O75112 727 aa9.87□□□□□ -0.83
SHPRH-206ENST00000438092 MAGEA8P43361 318 aa9.87□□□□□ -0.83
SHPRH-206ENST00000438092 RABIFP47224 123 aa9.87□□□□□ -0.83
SHPRH-206ENST00000438092 EEF1A2Q05639 463 aaKnown RBP9.87□□□□□ -0.83
SHPRH-206ENST00000438092 ABHD18Q0P651 414 aa9.87□□□□□ -0.83
SHPRH-206ENST00000438092 AIMP2Q13155 320 aaKnown RBP9.87□□□□□ -0.83
SHPRH-206ENST00000438092 CCDC58Q4VC31 144 aa9.87□□□□□ -0.83
SHPRH-206ENST00000438092 VASH1Q7L8A9 365 aaPredicted RBP9.87□□□□□ -0.83
SHPRH-206ENST00000438092 MINDY2Q8NBR6 621 aa9.87□□□□□ -0.83
SHPRH-206ENST00000438092 OR52B6Q8NGF0 335 aa9.87□□□□□ -0.83
SHPRH-206ENST00000438092 BBS10Q8TAM1 723 aa9.87□□□□□ -0.83
SHPRH-206ENST00000438092 METTL2AQ96IZ6 378 aaKnown RBP9.87□□□□□ -0.83
SHPRH-206ENST00000438092 NECAB3Q96P71 396 aaPredicted RBP9.87□□□□□ -0.83
SHPRH-206ENST00000438092 LMF1Q96S06 567 aa9.87□□□□□ -0.83
SHPRH-206ENST00000438092 TM9SF3Q9HD45 589 aa9.87□□□□□ -0.83
SHPRH-206ENST00000438092 HEBP1Q9NRV9 189 aa9.87□□□□□ -0.83
SHPRH-206ENST00000438092 RFXAPO00287 272 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 PROS1P07225 676 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 HNRNPA1P09651 372 aaKnown RBP eCLIP9.86□□□□□ -0.83
SHPRH-206ENST00000438092 CD1DP15813 335 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 INCA1Q0VD86 236 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 KIAA0319Q5VV43 1072 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 OR2T33Q8NG76 320 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 ZNF689Q96CS4 500 aaPredicted RBP9.86□□□□□ -0.83
SHPRH-206ENST00000438092 TOE1Q96GM8 510 aaKnown RBP9.86□□□□□ -0.83
SHPRH-206ENST00000438092 C1orf74Q96LT6 269 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 SORBS1Q9BX66 1292 aaKnown RBP9.86□□□□□ -0.83
SHPRH-206ENST00000438092 RXFP3Q9NSD7 469 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 HCSTQ9UBK5 93 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 CDC14CA4D256 554 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 EEF1E1O43324 174 aaKnown RBP9.86□□□□□ -0.83
SHPRH-206ENST00000438092 CERS1P27544 350 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 HSD17B12Q53GQ0 312 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 CLLU1OSQ5K130 101 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 C6orf136Q5SQH8 315 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 C9orf43Q8TAL5 461 aaPredicted RBP9.86□□□□□ -0.83
SHPRH-206ENST00000438092 IMP4Q96G21 291 aaKnown RBP9.86□□□□□ -0.83
SHPRH-206ENST00000438092 SECISBP2Q96T21 854 aaKnown RBP9.86□□□□□ -0.83
SHPRH-206ENST00000438092 OR2S2Q9NQN1 319 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 MYOM1P52179 1685 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 IFNGR1P15260 489 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 SPINT3P49223 89 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 MFSD13AQ14CX5 517 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 FAM205BPQ63HN1 556 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 FBXO46Q6PJ61 603 aaPredicted RBP9.86□□□□□ -0.83
SHPRH-206ENST00000438092 SEC14L1Q92503 715 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 HSD3B7Q9H2F3 369 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 HLA-DPB1P04440 258 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 ABOP16442 354 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 PGCP20142 388 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 FPR1P21462 350 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 ETV5P41161 510 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 ARSDP51689 593 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 AFF1P51825 1210 aaKnown RBP9.86□□□□□ -0.83
SHPRH-206ENST00000438092 SLC35G1Q2M3R5 365 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 HMBOX1Q6NT76 420 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 ZNF584Q8IVC4 421 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 TMEFF1Q8IYR6 380 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 FRS2Q8WU20 508 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 C2orf42Q9NWW7 574 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 RNF6Q9Y252 685 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 F5H5K5 113 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 ZNF12P17014 697 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 AKR1C4P17516 323 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 EPHA1P21709 976 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 GCGRP47871 477 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 RPA4Q13156 261 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 APOFQ13790 326 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 C22orf42Q6IC83 251 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 ZNF517Q6ZMY9 492 aaPredicted RBP9.86□□□□□ -0.83
SHPRH-206ENST00000438092 LARP4Q71RC2 724 aaKnown RBP eCLIP9.86□□□□□ -0.83
SHPRH-206ENST00000438092 FAM217AQ8IXS0 508 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 C12orf43Q96C57 262 aaKnown RBP9.86□□□□□ -0.83
SHPRH-206ENST00000438092 EXTL2Q9UBQ6 330 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 SUSD2Q9UGT4 822 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 RNF215Q9Y6U7 377 aa9.86□□□□□ -0.83
SHPRH-206ENST00000438092 SLC22A1O15245 554 aa9.85□□□□□ -0.83
SHPRH-206ENST00000438092 ZNF865P0CJ78 1059 aaPredicted RBP9.85□□□□□ -0.83
SHPRH-206ENST00000438092 STOMP27105 288 aa9.85□□□□□ -0.83
SHPRH-206ENST00000438092 FOLR3P41439 243 aa9.85□□□□□ -0.83
SHPRH-206ENST00000438092 DPP6P42658 865 aa9.85□□□□□ -0.83
SHPRH-206ENST00000438092 RIDAP52758 137 aaKnown RBP9.85□□□□□ -0.83
SHPRH-206ENST00000438092 RSU1Q15404 277 aa9.85□□□□□ -0.83
SHPRH-206ENST00000438092 TMEM69Q5SWH9 247 aa9.85□□□□□ -0.83
SHPRH-206ENST00000438092 C6orf132Q5T0Z8 1188 aa9.85□□□□□ -0.83
SHPRH-206ENST00000438092 GLT8D1Q68CQ7 371 aa9.85□□□□□ -0.83
SHPRH-206ENST00000438092 IQCF1Q8N6M8 205 aa9.85□□□□□ -0.83
SHPRH-206ENST00000438092 TOR1AIP2Q8NFQ8 470 aa9.85□□□□□ -0.83
SHPRH-206ENST00000438092 FOXJ1Q92949 421 aa9.85□□□□□ -0.83
SHPRH-206ENST00000438092 TCEAL4Q96EI5 215 aa9.85□□□□□ -0.83
SHPRH-206ENST00000438092 MGAT4BQ9UQ53 548 aa9.85□□□□□ -0.83
SHPRH-206ENST00000438092 CAMK2AQ9UQM7 478 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms