RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 PDE7AQ13946 482 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 GAS6Q14393 721 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 TIGD6Q17RP2 521 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 REEP3Q6NUK4 255 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 SIX5Q8N196 739 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 FAM160A2Q8N612 972 aaPredicted RBP8.95□□□□□ -0.98
CUX1-206ENST00000437600 SCAIQ8N9R8 606 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 KCT2Q8NC54 265 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 OR2A1Q8NGT9 310 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 RHOXF1Q8NHV9 184 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 PSMA8Q8TAA3 256 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 ZHX1-C8orf76Q96EF9 292 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 MAGEB10Q96LZ2 347 aaPredicted RBP8.95□□□□□ -0.98
CUX1-206ENST00000437600 Q96MT0 163 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 EPYCQ99645 322 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 MS4A8Q9BY19 250 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 ZNF556Q9HAH1 456 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 DNAJC27Q9NZQ0 273 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 TMEM9Q9P0T7 183 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 CLEC2DQ9UHP7 191 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 MUTYHQ9UIF7 546 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 FBXL21Q9UKT6 434 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 CAB39Q9Y376 341 aaPredicted RBP8.95□□□□□ -0.98
CUX1-206ENST00000437600 SLCO1B1Q9Y6L6 691 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 TECTAO75443 2155 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 SYNDIG1LA6NDD5 238 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 PDPK1O15530 556 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 IFNW1P05000 195 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 MSL3P1P0C860 447 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 SRFP11831 508 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 GGT2P36268 569 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 PIK3CBP42338 1070 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 TGM4P49221 684 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 TPMTP51580 245 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 GABARAPL2P60520 117 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 ZP2Q05996 745 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 NIPAL1Q6NVV3 410 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 PAQR6Q6TCH4 344 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 PTCHD4Q6ZW05 846 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 OXR1Q8N573 874 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 GOT1L1Q8NHS2 421 aaPredicted RBP8.95□□□□□ -0.98
CUX1-206ENST00000437600 PATE1Q8WXA2 126 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 STARD8Q92502 1023 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 KAT2AQ92830 837 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 PIP5K1AQ99755 562 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 GABRG3Q99928 467 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 TREX2Q9BQ50 279 aaPredicted RBP8.95□□□□□ -0.98
CUX1-206ENST00000437600 GABARAPL1Q9H0R8 117 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 TPK1Q9H3S4 243 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 GLIPR2Q9H4G4 154 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 SIRT3Q9NTG7 399 aaPredicted RBP8.95□□□□□ -0.98
CUX1-206ENST00000437600 ZCCHC3Q9NUD5 404 aaKnown RBP8.95□□□□□ -0.98
CUX1-206ENST00000437600 ZMAT5Q9UDW3 170 aaKnown RBP8.95□□□□□ -0.98
CUX1-206ENST00000437600 CLDN24A6NM45 220 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 NDUFS4O43181 175 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 AIREO43918 545 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 BMP4P12644 408 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 ACVR2AP27037 513 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 BCL6P41182 706 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 XCR1P46094 333 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 NCBP2P52298 156 aaKnown RBP eCLIP8.94□□□□□ -0.982e-6■■□□□ 13
CUX1-206ENST00000437600 RAB15P59190 212 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 ID2Q02363 134 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 TARDBPQ13148 414 aaKnown RBP eCLIP8.94□□□□□ -0.989e-7■■■■□ 26.1
CUX1-206ENST00000437600 SLC13A2Q13183 592 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 SLAMF1Q13291 335 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 E2F2Q14209 437 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 HEPACAMQ14CZ8 416 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 SYT6Q5T7P8 510 aaPredicted RBP8.94□□□□□ -0.98
CUX1-206ENST00000437600 LCTLQ6UWM7 567 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 OR4C15Q8NGM1 316 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 SLC7A13Q8TCU3 470 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 SETD7Q8WTS6 366 aaKnown RBP8.94□□□□□ -0.98
CUX1-206ENST00000437600 GIMAP1Q8WWP7 306 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 OR1E3Q8WZA6 343 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 YIPF6Q96EC8 236 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 WDR34Q96EX3 536 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 CAMK1GQ96NX5 476 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 BTBD1Q9H0C5 482 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 TMEM168Q9H0V1 697 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 OR51I1Q9H343 314 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 CAPN10Q9HC96 672 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 SEC14L3Q9UDX4 400 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 TBC1D29Q9UFV1 150 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 NTNG1Q9Y2I2 539 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 NAALAD2Q9Y3Q0 740 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 HCN4Q9Y3Q4 1203 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 MDC1Q14676 2089 aaKnown RBP8.94□□□□□ -0.98
CUX1-206ENST00000437600 OR2A25A4D2G3 310 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 CLCA1A8K7I4 914 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 ISM1B1AKI9 464 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 CACNB4O00305 520 aaPredicted RBP8.94□□□□□ -0.98
CUX1-206ENST00000437600 HAT1O14929 419 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 CAPN5O15484 640 aaPredicted RBP8.94□□□□□ -0.98
CUX1-206ENST00000437600 HYAL3O43820 417 aaPredicted RBP8.94□□□□□ -0.98
CUX1-206ENST00000437600 CCNB2O95067 398 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 RASGRP1O95267 797 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 ARAFP10398 606 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 NR2F1P10589 423 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 FOSL1P15407 271 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms