RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 ENTPD8Q5MY95 495 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 C1orf94Q6P1W5 598 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 ABHD17CQ6PCB6 329 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 PODNL1Q6PEZ8 512 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 ZNF793Q6ZN11 406 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 ATCAYQ86WG3 371 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 NLGN4XQ8N0W4 816 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 AMER3Q8N944 861 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 ZNF784Q8NCA9 323 aaPredicted RBP9.84□□□□□ -0.83
CD44-210ENST00000434472 GALNT6Q8NCL4 622 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 PROKR2Q8NFJ6 384 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 OR4D11Q8NGI4 311 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 OR52E1Q8NGJ3 308 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 GNPDA2Q8TDQ7 276 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 MS4A6EQ96DS6 147 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 OR5M11Q96RB7 305 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 IL4I1Q96RQ9 567 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 CENPOQ9BU64 300 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 TSSK6Q9BXA6 273 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 PRRG3Q9BZD7 231 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 ROGDIQ9GZN7 287 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 XKR8Q9H6D3 395 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 ARMC7Q9H6L4 198 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 KIR3DX1Q9H7L2 352 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 FBRSQ9HAH7 460 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 ZNF229Q9UJW7 825 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 SLC6A14Q9UN76 642 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 ZFR2Q9UPR6 939 aaKnown RBP9.84□□□□□ -0.83
CD44-210ENST00000434472 LIPT1Q9Y234 373 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 LSM2Q9Y333 95 aaKnown RBP9.84□□□□□ -0.83
CD44-210ENST00000434472 SNX11Q9Y5W9 270 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 COLEC10Q9Y6Z7 277 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 MN1Q10571 1320 aaPredicted RBP9.84□□□□□ -0.83
CD44-210ENST00000434472 ALPK3Q96L96 1907 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 IGKV1-8A0A0C4DH67 115 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 A0A1W2PP55 124 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 PRAMEF27A3QJZ7 478 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 FAM227AF5H4B4 570 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 ARHGAP33O14559 1287 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 HAT1O14929 419 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 MYL12BO14950 172 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 ERAL1O75616 437 aaKnown RBP9.83□□□□□ -0.84
CD44-210ENST00000434472 PTTG1O95997 202 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 PAK4O96013 591 aaPredicted RBP9.83□□□□□ -0.84
CD44-210ENST00000434472 CEACAM5P06731 702 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 NDUFS1P28331 727 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 MPIP34949 423 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 PCYT1AP49585 367 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 SMSP52788 366 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 ERVK-21P61565 698 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 ZNF91Q05481 1191 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 SPHARQ15513 63 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 LEXMQ3ZCV2 418 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 SPANXN2Q5MJ10 180 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 SLC48A1Q6P1K1 146 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 SPRED2Q7Z698 418 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 RBM45Q8IUH3 476 aaKnown RBP9.83□□□□□ -0.84
CD44-210ENST00000434472 SLC34A3Q8N130 599 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 NANOGP1Q8N7R0 232 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 TCEANCQ8N8B7 351 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 ACOT4Q8N9L9 421 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 FLCNQ8NFG4 579 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 OR4K5Q8NGD3 323 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 SLC7A13Q8TCU3 470 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 CEP19Q96LK0 163 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 OPALINQ96PE5 141 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 CDCA3Q99618 268 aaPredicted RBP9.83□□□□□ -0.84
CD44-210ENST00000434472 NRTNQ99748 197 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 NUAK2Q9H093 628 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 LMAN2LQ9H0V9 348 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 ANKRD19PQ9H560 264 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 SLC6A20Q9NP91 592 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 PRDM7Q9NQW5 492 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 ABCB10Q9NRK6 738 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 DNAJC27Q9NZQ0 273 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 SLC13A4Q9UKG4 626 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 PAIP2BQ9ULR5 123 aaKnown RBP9.83□□□□□ -0.84
CD44-210ENST00000434472 STUB1Q9UNE7 303 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 DIMT1Q9UNQ2 313 aaKnown RBP9.83□□□□□ -0.84
CD44-210ENST00000434472 KCNK6Q9Y257 313 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 GPSM3Q9Y4H4 160 aa9.83□□□□□ -0.84
CD44-210ENST00000434472 A0A0G2JN53 185 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 A0A1W2PR48 441 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 GSAPA4D1B5 854 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 M0R3H8 397 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 ZSCAN9O15535 394 aaPredicted RBP9.82□□□□□ -0.84
CD44-210ENST00000434472 RNGTTO60942 597 aaKnown RBP9.82□□□□□ -0.84
CD44-210ENST00000434472 SEMA7AO75326 666 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 SOX14O95416 240 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 RAB36O95755 333 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 AGR2O95994 175 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 TP53P04637 393 aaPredicted RBP9.82□□□□□ -0.84
CD44-210ENST00000434472 ALPPP05187 535 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 HOXC4P09017 264 aaPredicted RBP9.82□□□□□ -0.84
CD44-210ENST00000434472 TNNI3P19429 210 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 FUT4P22083 530 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 PSMA1P25786 263 aaKnown RBP9.82□□□□□ -0.84
CD44-210ENST00000434472 BUD31P41223 144 aaPredicted RBP9.82□□□□□ -0.84
CD44-210ENST00000434472 WASP42768 502 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 PRKAG1P54619 331 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms