RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 C16orf47Q6ZP98 133 aaPredicted RBP14.41□□□□□ -0.1
TREX1-201ENST00000433541 ACAD11Q709F0 780 aa14.41□□□□□ -0.1
TREX1-201ENST00000433541 C9orf40Q8IXQ3 194 aa14.41□□□□□ -0.1
TREX1-201ENST00000433541 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.41□□□□□ -0.1
TREX1-201ENST00000433541 SLC22A8Q8TCC7 542 aa14.41□□□□□ -0.1
TREX1-201ENST00000433541 CKAP2Q8WWK9 683 aa14.41□□□□□ -0.1
TREX1-201ENST00000433541 HAS2Q92819 552 aa14.41□□□□□ -0.1
TREX1-201ENST00000433541 TMEM125Q96AQ2 219 aa14.41□□□□□ -0.1
TREX1-201ENST00000433541 MAGED4Q96JG8 741 aa14.41□□□□□ -0.1
TREX1-201ENST00000433541 C5orf34Q96MH7 638 aa14.41□□□□□ -0.1
TREX1-201ENST00000433541 NPAS2Q99743 824 aa14.41□□□□□ -0.1
TREX1-201ENST00000433541 RNF32Q9H0A6 362 aa14.41□□□□□ -0.1
TREX1-201ENST00000433541 KLHL1Q9NR64 748 aa14.41□□□□□ -0.1
TREX1-201ENST00000433541 MAT2BQ9NZL9 334 aa14.41□□□□□ -0.1
TREX1-201ENST00000433541 LRFN1Q9P244 771 aa14.41□□□□□ -0.1
TREX1-201ENST00000433541 MYOTQ9UBF9 498 aa14.41□□□□□ -0.1
TREX1-201ENST00000433541 YARS2Q9Y2Z4 477 aaKnown RBP14.41□□□□□ -0.1
TREX1-201ENST00000433541 USH1CQ9Y6N9 552 aa14.41□□□□□ -0.1
TREX1-201ENST00000433541 C2orf92A0A1B0GVN3 265 aa14.4□□□□□ -0.1
TREX1-201ENST00000433541 A8MVJ9 347 aa14.4□□□□□ -0.1
TREX1-201ENST00000433541 SDHDO14521 159 aa14.4□□□□□ -0.1
TREX1-201ENST00000433541 PRAMEF2O60811 474 aa14.4□□□□□ -0.1
TREX1-201ENST00000433541 IGKV3-11P04433 115 aa14.4□□□□□ -0.1
TREX1-201ENST00000433541 CD46P15529 392 aa14.4□□□□□ -0.1
TREX1-201ENST00000433541 EFNA1P20827 205 aaPredicted RBP14.4□□□□□ -0.1
TREX1-201ENST00000433541 PRPS1L1P21108 318 aa14.4□□□□□ -0.1
TREX1-201ENST00000433541 TNFSF10P50591 281 aa14.4□□□□□ -0.1
TREX1-201ENST00000433541 MANFP55145 182 aaKnown RBP14.4□□□□□ -0.1
TREX1-201ENST00000433541 SLC37A1P57057 533 aa14.4□□□□□ -0.1
TREX1-201ENST00000433541 OR1C1Q15619 314 aa14.4□□□□□ -0.1
TREX1-201ENST00000433541 PLEKHN1Q494U1 663 aaPredicted RBP14.4□□□□□ -0.1
TREX1-201ENST00000433541 TRMT12Q53H54 448 aaKnown RBP14.4□□□□□ -0.1
TREX1-201ENST00000433541 CPTPQ5TA50 214 aa14.4□□□□□ -0.1
TREX1-201ENST00000433541 ZNF605Q86T29 641 aa14.4□□□□□ -0.1
TREX1-201ENST00000433541 CYP4Z2PQ8N1L4 340 aa14.4□□□□□ -0.1
TREX1-201ENST00000433541 OR7G1Q8NGA0 311 aa14.4□□□□□ -0.1
TREX1-201ENST00000433541 OR7A2PQ8NGA2 310 aa14.4□□□□□ -0.1
TREX1-201ENST00000433541 OR52R1Q8NGF1 315 aa14.4□□□□□ -0.1
TREX1-201ENST00000433541 OR8K3Q8NH51 312 aa14.4□□□□□ -0.1
TREX1-201ENST00000433541 CIDECQ96AQ7 238 aaPredicted RBP14.4□□□□□ -0.1
TREX1-201ENST00000433541 MTERF3Q96E29 417 aa14.4□□□□□ -0.1
TREX1-201ENST00000433541 ZBED6CLQ96FA7 236 aaPredicted RBP14.4□□□□□ -0.1
TREX1-201ENST00000433541 ZNF681Q96N22 645 aa14.4□□□□□ -0.1
TREX1-201ENST00000433541 DPY30Q9C005 99 aa14.4□□□□□ -0.1
TREX1-201ENST00000433541 WWTR1Q9GZV5 400 aa14.4□□□□□ -0.1
TREX1-201ENST00000433541 DDX18Q9NVP1 670 aaKnown RBP14.4□□□□□ -0.1
TREX1-201ENST00000433541 HPF1Q9NWY4 346 aa14.4□□□□□ -0.1
TREX1-201ENST00000433541 CFL2Q9Y281 166 aa14.4□□□□□ -0.1
TREX1-201ENST00000433541 MYO1GB0I1T2 1018 aa14.39□□□□□ -0.11
TREX1-201ENST00000433541 TCP11X1B4DZS4 312 aa14.39□□□□□ -0.11
TREX1-201ENST00000433541 DYNC1I1O14576 645 aa14.39□□□□□ -0.11
TREX1-201ENST00000433541 POLR3GO15318 223 aaPredicted RBP14.39□□□□□ -0.11
TREX1-201ENST00000433541 CFLARO15519 480 aa14.39□□□□□ -0.11
TREX1-201ENST00000433541 BCAS2O75934 225 aaPredicted RBP14.39□□□□□ -0.11
TREX1-201ENST00000433541 CD96P40200 585 aa14.39□□□□□ -0.11
TREX1-201ENST00000433541 MC3RP41968 323 aa14.39□□□□□ -0.11
TREX1-201ENST00000433541 NR0B1P51843 470 aaKnown RBP14.39□□□□□ -0.11
TREX1-201ENST00000433541 DIO3P55073 304 aa14.39□□□□□ -0.11
TREX1-201ENST00000433541 NME5P56597 212 aa14.39□□□□□ -0.11
TREX1-201ENST00000433541 NRG3P56975 720 aa14.39□□□□□ -0.11
TREX1-201ENST00000433541 FUT7Q11130 342 aa14.39□□□□□ -0.11
TREX1-201ENST00000433541 MAP4K2Q12851 820 aa14.39□□□□□ -0.11
TREX1-201ENST00000433541 ZNF155Q12901 538 aaPredicted RBP14.39□□□□□ -0.11
TREX1-201ENST00000433541 NNATQ16517 81 aa14.39□□□□□ -0.11
TREX1-201ENST00000433541 MAPKAPK3Q16644 382 aa14.39□□□□□ -0.11
TREX1-201ENST00000433541 SLC9B1Q4ZJI4 515 aa14.39□□□□□ -0.11
TREX1-201ENST00000433541 ZNF385BQ569K4 471 aa14.39□□□□□ -0.11
TREX1-201ENST00000433541 TMEM107Q6UX40 140 aa14.39□□□□□ -0.11
TREX1-201ENST00000433541 IL20RBQ6UXL0 311 aa14.39□□□□□ -0.11
TREX1-201ENST00000433541 Q6ZS92 163 aa14.39□□□□□ -0.11
TREX1-201ENST00000433541 SPATA19Q7Z5L4 167 aa14.39□□□□□ -0.11
TREX1-201ENST00000433541 KRTCAP2Q8N6L1 136 aa14.39□□□□□ -0.11
TREX1-201ENST00000433541 THOC1Q96FV9 657 aaKnown RBP14.39□□□□□ -0.11
TREX1-201ENST00000433541 AMDHD1Q96NU7 426 aa14.39□□□□□ -0.11
TREX1-201ENST00000433541 RASL10BQ96S79 203 aa14.39□□□□□ -0.11
TREX1-201ENST00000433541 GLIPR2Q9H4G4 154 aa14.39□□□□□ -0.11
TREX1-201ENST00000433541 ANKRA2Q9H9E1 313 aa14.39□□□□□ -0.11
TREX1-201ENST00000433541 TAS2R7Q9NYW3 318 aa14.39□□□□□ -0.11
TREX1-201ENST00000433541 MAPRE3Q9UPY8 281 aa14.39□□□□□ -0.11
TREX1-201ENST00000433541 EXO1Q9UQ84 846 aaKnown RBP14.39□□□□□ -0.11
TREX1-201ENST00000433541 EML6Q6ZMW3 1958 aa14.39□□□□□ -0.11
TREX1-201ENST00000433541 COQ9O75208 318 aa14.38□□□□□ -0.11
TREX1-201ENST00000433541 SLC25A12O75746 678 aa14.38□□□□□ -0.11
TREX1-201ENST00000433541 SOX3P41225 446 aa14.38□□□□□ -0.11
TREX1-201ENST00000433541 HLCSP50747 726 aa14.38□□□□□ -0.11
TREX1-201ENST00000433541 MLLT10P55197 1068 aa14.38□□□□□ -0.11
TREX1-201ENST00000433541 EBPQ15125 230 aaKnown RBP14.38□□□□□ -0.11
TREX1-201ENST00000433541 PRSS53Q2L4Q9 553 aa14.38□□□□□ -0.11
TREX1-201ENST00000433541 ZNF628Q5EBL2 1059 aa14.38□□□□□ -0.11
TREX1-201ENST00000433541 ZNF766Q5HY98 468 aa14.38□□□□□ -0.11
TREX1-201ENST00000433541 SPINK14Q6IE38 97 aa14.38□□□□□ -0.11
TREX1-201ENST00000433541 OPN5Q6U736 354 aa14.38□□□□□ -0.11
TREX1-201ENST00000433541 LARP4Q71RC2 724 aaKnown RBP eCLIP14.38□□□□□ -0.11
TREX1-201ENST00000433541 ZNF551Q7Z340 670 aaPredicted RBP14.38□□□□□ -0.11
TREX1-201ENST00000433541 TAGAPQ8N103 731 aa14.38□□□□□ -0.11
TREX1-201ENST00000433541 TMEM178AQ8NBL3 297 aa14.38□□□□□ -0.11
TREX1-201ENST00000433541 FAM98AQ8NCA5 519 aaKnown RBP14.38□□□□□ -0.11
TREX1-201ENST00000433541 CEP70Q8NHQ1 597 aa14.38□□□□□ -0.11
TREX1-201ENST00000433541 C16orf52Q8NHV5 167 aa14.38□□□□□ -0.11
TREX1-201ENST00000433541 NUBPLQ8TB37 319 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms