RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 SMAD6O43541 496 aaKnown RBP10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 HLA-DQB1P01920 261 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 SLC6A12P48065 614 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 CCR6P51684 374 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 DSTNP60981 165 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 MEF2AQ02078 507 aaPredicted RBP10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 MLLT1Q03111 559 aaPredicted RBP10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 MAP4K2Q12851 820 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 ZNF630Q2M218 657 aaPredicted RBP10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 KIAA1161Q6NSJ0 714 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 TCTN3Q6NUS6 607 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 METTL2BQ6P1Q9 378 aaKnown RBP10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 PGBD2Q6P3X8 592 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 OLIG3Q7RTU3 272 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 KIAA0907Q7Z7F0 614 aaPredicted RBP10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 FTMTQ8N4E7 242 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 MS4A15Q8N5U1 240 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 OR4F15Q8NGB8 312 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 OR2T35Q8NGX2 323 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 NXPE2Q96DL1 559 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 RBP7Q96R05 134 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 TRPM5Q9NZQ8 1165 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 LHX3Q9UBR4 397 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 MAB21L2Q9Y586 359 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 WDR90Q96KV7 1748 aa10.95□□□□□ -0.66
HMGCS1-202ENST00000433297 RPS10-NUDT3A0A1W2PQS6 291 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 OR2AG2A6NM03 316 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 A8MVJ9 347 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 LGALS8O00214 317 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 RNASET2O00584 256 aaKnown RBP10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 GABRPO00591 440 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 SOD1P00441 154 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 EPHX1P07099 455 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 CD3GP09693 182 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 XPAP23025 273 aaPredicted RBP10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 GABRA5P31644 462 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 OPRD1P41143 372 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 GIPRP48546 466 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 DGKGP49619 791 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 HNMTP50135 292 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 CLCNKAP51800 687 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 TAS2R50P59544 299 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 RING1Q06587 406 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 DSC1Q08554 894 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 TUSC1Q2TAM9 212 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 C12orf73Q69YU5 71 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 TMEM91Q6ZNR0 172 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 RASSF6Q6ZTQ3 369 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 TECPR1Q7Z6L1 1165 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 TMPRSS11BQ86T26 416 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 WDR20Q8TBZ3 569 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 PIGKQ92643 395 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 REEP4Q9H6H4 257 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 EGLN3Q9H6Z9 239 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 RC3H2Q9HBD1 1191 aaKnown RBP10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 SLAMF7Q9NQ25 335 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 SF3B6Q9Y3B4 125 aaKnown RBP10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 TOR1AO14656 332 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 SEMA7AO75326 666 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 IFNA16P05015 189 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 C8GP07360 202 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 RRASP10301 218 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 GJA5P36382 358 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 KCNC3Q14003 757 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 CCSMST1Q4G0I0 132 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 IQCHQ86VS3 1027 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 GPR135Q8IZ08 494 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 OR7G3Q8NG95 312 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 RAET1EQ8TD07 263 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 FUBP3Q96I24 572 aaKnown RBP eCLIP10.94□□□□□ -0.664e-8■■■□□ 18
HMGCS1-202ENST00000433297 MED18Q9BUE0 208 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 SERHL2Q9H4I8 314 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 SLCO1C1Q9NYB5 712 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 CACNG2Q9Y698 323 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 A0A1B0GVM2 712 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 SGK494L7N484 410 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 TBL1XO60907 577 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 ZNF8P17098 575 aaPredicted RBP10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 KELP23276 732 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 TIA1P31483 386 aaKnown RBP eCLIP10.94□□□□□ -0.663e-8■■■■□ 23.7
HMGCS1-202ENST00000433297 MTNR1AP48039 350 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 MBTPS1Q14703 1052 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 CLLU1Q5K131 121 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 LIPJQ5W064 366 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 REEP3Q6NUK4 255 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 LYPD4Q6UWN0 246 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 TRILQ7L0X0 811 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 GSX2Q9BZM3 304 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 DPAGT1Q9H3H5 408 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 NT5DC2Q9H857 520 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 BRD9Q9H8M2 597 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 GPBP1L1Q9HC44 474 aaPredicted RBP10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 MIEF1Q9NQG6 463 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 KLHL1Q9NR64 748 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 SPATA6Q9NWH7 488 aaPredicted RBP10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 MYO16Q9Y6X6 1858 aa10.94□□□□□ -0.66
HMGCS1-202ENST00000433297 DSPPQ9NZW4 1301 aa10.93□□□□□ -0.66
HMGCS1-202ENST00000433297 M0R3H8 397 aa10.93□□□□□ -0.66
HMGCS1-202ENST00000433297 FZD6O60353 706 aa10.93□□□□□ -0.66
HMGCS1-202ENST00000433297 RGS11O94810 467 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms