RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 LIN37Q96GY3 246 aaPredicted RBP17.08■□□□□ 0.32
HMGN1-206ENST00000431390 LRGUKQ96M69 825 aa17.08■□□□□ 0.32
HMGN1-206ENST00000431390 YIPF2Q9BWQ6 316 aa17.08■□□□□ 0.32
HMGN1-206ENST00000431390 NTMQ9P121 344 aa17.08■□□□□ 0.32
HMGN1-206ENST00000431390 PTGFRNQ9P2B2 879 aa17.08■□□□□ 0.32
HMGN1-206ENST00000431390 AQP12BA6NM10 295 aa17.07■□□□□ 0.32
HMGN1-206ENST00000431390 CPNE3O75131 537 aaKnown RBP17.07■□□□□ 0.32
HMGN1-206ENST00000431390 FKBP6O75344 327 aa17.07■□□□□ 0.32
HMGN1-206ENST00000431390 GMNNO75496 209 aa17.07■□□□□ 0.32
HMGN1-206ENST00000431390 DKK1O94907 266 aa17.07■□□□□ 0.32
HMGN1-206ENST00000431390 MC3RP41968 323 aa17.07■□□□□ 0.32
HMGN1-206ENST00000431390 CRATP43155 626 aa17.07■□□□□ 0.32
HMGN1-206ENST00000431390 STX4Q12846 297 aa17.07■□□□□ 0.32
HMGN1-206ENST00000431390 SERTAD2Q14140 314 aa17.07■□□□□ 0.32
HMGN1-206ENST00000431390 MAP7Q14244 749 aa17.07■□□□□ 0.32
HMGN1-206ENST00000431390 ERV3-1Q14264 604 aa17.07■□□□□ 0.32
HMGN1-206ENST00000431390 LTB4RQ15722 352 aa17.07■□□□□ 0.32
HMGN1-206ENST00000431390 ISXQ2M1V0 245 aa17.07■□□□□ 0.32
HMGN1-206ENST00000431390 GLIPR1L2Q4G1C9 344 aa17.07■□□□□ 0.32
HMGN1-206ENST00000431390 ZNF628Q5EBL2 1059 aa17.07■□□□□ 0.32
HMGN1-206ENST00000431390 AAGABQ6PD74 315 aa17.07■□□□□ 0.32
HMGN1-206ENST00000431390 QSOX2Q6ZRP7 698 aa17.07■□□□□ 0.32
HMGN1-206ENST00000431390 AQP12AQ8IXF9 295 aa17.07■□□□□ 0.32
HMGN1-206ENST00000431390 ZZZ3Q8IYH5 903 aa17.07■□□□□ 0.32
HMGN1-206ENST00000431390 ST13P4Q8IZP2 240 aaPredicted RBP17.07■□□□□ 0.32
HMGN1-206ENST00000431390 SLC38A9Q8NBW4 561 aa17.07■□□□□ 0.32
HMGN1-206ENST00000431390 PELOQ9BRX2 385 aaKnown RBP17.07■□□□□ 0.32
HMGN1-206ENST00000431390 CLDN16Q9Y5I7 305 aa17.07■□□□□ 0.32
HMGN1-206ENST00000431390 IGLV3-12A0A075B6K2 115 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 A0A087WV62 115 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 SEC16AO15027 2179 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 GSTA4O15217 222 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 TNFRSF21O75509 655 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 CDC123O75794 336 aaPredicted RBP17.06■□□□□ 0.32
HMGN1-206ENST00000431390 ATP6V1G2O95670 118 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 MT-CO3P00414 261 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 CCL4P13236 92 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 ATP6V1B2P21281 511 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 MAPK10P53779 464 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 RAB15P59190 212 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 DCDP81605 110 aaKnown RBP17.06■□□□□ 0.32
HMGN1-206ENST00000431390 TXNL4AP83876 142 aaKnown RBP17.06■□□□□ 0.32
HMGN1-206ENST00000431390 RBBP4Q09028 425 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 TP53BP2Q13625 1128 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 ADRM1Q16186 407 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 VMACQ2NL98 169 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 MTX3Q5HYI7 312 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 COX20Q5RI15 118 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 ZNF385CQ66K41 422 aaPredicted RBP17.06■□□□□ 0.32
HMGN1-206ENST00000431390 GLYATQ6IB77 296 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 COX15Q7KZN9 410 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 PTOV1Q86YD1 416 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 GOLM1Q8NBJ4 401 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 HIPK4Q8NE63 616 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 OR52E4Q8NGH9 312 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 CRELD1Q96HD1 420 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 SLC35G5Q96KT7 338 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 DEPDC7Q96QD5 511 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 TGIF2Q9GZN2 237 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 TMEM38AQ9H6F2 299 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 GORASP2Q9H8Y8 452 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 DKK4Q9UBT3 224 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 LOXL2Q9Y4K0 774 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 SMG1Q96Q15 3661 aaKnown RBP17.06■□□□□ 0.32
HMGN1-206ENST00000431390 TCRBV3S1A0A5B6 114 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 FAM149AA5PLN7 773 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 SYNDIG1LA6NDD5 238 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 TRABD2BA6NFA1 517 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 TGFBR3LH3BV60 316 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 OR10H2O60403 315 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 PSMG1O95456 288 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 C8BP07358 591 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 ETFAP13804 333 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 NT5EP21589 574 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 GALNSP34059 522 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 RORAP35398 523 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 POLE2P56282 527 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 BTG2P78543 158 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 VEZF1Q14119 521 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 PRICKLE4Q2TBC4 344 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 NKAIN1Q4KMZ8 207 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 GCNT6Q5T4J0 391 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 FBXW10Q5XX13 1052 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 CEACAM20Q6UY09 585 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 CYP2R1Q6VVX0 501 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 SPATA24Q86W54 205 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 ZC3H7AQ8IWR0 971 aaKnown RBP17.06■□□□□ 0.32
HMGN1-206ENST00000431390 OR2L13Q8N349 312 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 C11orf65Q8NCR3 313 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 NUP43Q8NFH3 380 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 ADCY4Q8NFM4 1077 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 OR7G2Q8NG99 324 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 SLC26A7Q8TE54 656 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 KAT2AQ92830 837 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 LRFN5Q96NI6 719 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 CTRCQ99895 268 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 ALOXE3Q9BYJ1 711 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 DCLRE1BQ9H816 532 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 SLC22A11Q9NSA0 550 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 THUMPD1Q9NXG2 353 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms