RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 PLPP4Q5VZY2 271 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 DESI1Q6ICB0 168 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 TMEM53Q6P2H8 277 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 TMC5Q6UXY8 1006 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 CEACAM20Q6UY09 585 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 GDPD3Q7L5L3 318 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 SNX29P2Q8IUI4 249 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 C1orf210Q8IVY1 113 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 FAM26EQ8N5C1 309 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 ZBTB44Q8NCP5 570 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 TMIEQ8NEW7 156 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 OR2L2Q8NH16 312 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 WDR48Q8TAF3 677 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 APOBEC4Q8WW27 367 aaKnown RBP8.24□□□□□ -1.09
GABPB1-205ENST00000429662 HTRA1Q92743 480 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 GTPBP3Q969Y2 492 aaKnown RBP8.24□□□□□ -1.09
GABPB1-205ENST00000429662 CIDECQ96AQ7 238 aaPredicted RBP8.24□□□□□ -1.09
GABPB1-205ENST00000429662 KIAA1143Q96AT1 154 aaPredicted RBP8.24□□□□□ -1.09
GABPB1-205ENST00000429662 ZBED6CLQ96FA7 236 aaPredicted RBP8.24□□□□□ -1.09
GABPB1-205ENST00000429662 AGAP4Q96P64 663 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 CORO1BQ9BR76 489 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 ASPNQ9BXN1 380 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 PRRG3Q9BZD7 231 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 HOXD1Q9GZZ0 328 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 TMEM245Q9H330 911 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 OR51B5Q9H339 312 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 KCNK12Q9HB15 430 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 SMURF1Q9HCE7 757 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 AMBNQ9NP70 447 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 POLE4Q9NR33 117 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 REV1Q9UBZ9 1251 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 ACAD8Q9UKU7 415 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 HYKKA2RU49 373 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 ZNF670-ZNF695F2Z2N8 137 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 J3KTA2 159 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 SLC30A4O14863 429 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 RGS13O14921 159 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 MYL12BO14950 172 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 SH3BP5O60239 455 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 KLHL18O94889 574 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 KCNK2O95069 426 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 CXCL14O95715 111 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 IL1AP01583 271 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 DRD2P14416 443 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 TNFRSF1BP20333 461 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 ACADLP28330 430 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 PDHA2P29803 388 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 PPP2R1BP30154 601 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 GRK5P34947 590 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 TGFBR1P36897 503 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 IFNGR2P38484 337 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 GPR1P46091 355 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 KCNJ5P48544 419 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 MAPK12P53778 367 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 MANFP55145 182 aaKnown RBP8.23□□□□□ -1.09
GABPB1-205ENST00000429662 MC1RQ01726 317 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 TMEM44Q2T9K0 475 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 SPDYE7PQ495Y7 208 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 LRRC73Q5JTD7 316 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 ZNF648Q5T619 568 aaPredicted RBP8.23□□□□□ -1.09
GABPB1-205ENST00000429662 PRAMEF8Q5VWM4 474 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 KHDRBS2Q5VWX1 349 aaKnown RBP8.23□□□□□ -1.09
GABPB1-205ENST00000429662 PRAMEF7Q5VXH5 474 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 BHLHB9Q6PI77 547 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 HSDL2Q6YN16 418 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 TMPRSS11AQ6ZMR5 421 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 TRMT11Q7Z4G4 463 aaKnown RBP8.23□□□□□ -1.09
GABPB1-205ENST00000429662 C17orf64Q86WR6 236 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 FAM129CQ86XR2 697 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 DCUN1D3Q8IWE4 304 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 CYP4Z2PQ8N1L4 340 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 RAB42Q8N4Z0 105 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 CLDN22Q8N7P3 220 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 NANOGP1Q8N7R0 232 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 FAM181AQ8N9Y4 354 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 FAM83FQ8NEG4 500 aaPredicted RBP8.23□□□□□ -1.09
GABPB1-205ENST00000429662 IL17RDQ8NFM7 739 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 BBS10Q8TAM1 723 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 AUTS2Q8WXX7 1259 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 SMPDL3AQ92484 453 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 AP3S1Q92572 193 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 NUS1Q96E22 293 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 ZNF486Q96H40 463 aaPredicted RBP8.23□□□□□ -1.09
GABPB1-205ENST00000429662 CAMK1GQ96NX5 476 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 OPALINQ96PE5 141 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 OR5M11Q96RB7 305 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 SNX18Q96RF0 628 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 MED18Q9BUE0 208 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 POLDIP3Q9BY77 421 aaKnown RBP8.23□□□□□ -1.09
GABPB1-205ENST00000429662 OR2B2Q9GZK3 357 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 POLR2J3Q9H1A7 115 aaKnown RBP8.23□□□□□ -1.09
GABPB1-205ENST00000429662 CXorf36Q9H7Y0 433 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 TBC1D17Q9HA65 648 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 WASH6PQ9NQA3 447 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 SACM1LQ9NTJ5 587 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 MRPS18AQ9NVS2 196 aaKnown RBP8.23□□□□□ -1.09
GABPB1-205ENST00000429662 NDUFB11Q9NX14 153 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 TAS2R7Q9NYW3 318 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 TAAR2Q9P1P5 351 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 P2RX2Q9UBL9 471 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms