RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 CCNYL2Q5T2Q4 361 aa15.68■□□□□ 0.1
TRIM39-209ENST00000428728 PAGE2Q7Z2X7 111 aa15.68■□□□□ 0.1
TRIM39-209ENST00000428728 MILR1Q7Z6M3 343 aa15.68■□□□□ 0.1
TRIM39-209ENST00000428728 RELL1Q8IUW5 271 aa15.68■□□□□ 0.1
TRIM39-209ENST00000428728 LIX1LQ8IVB5 337 aa15.68■□□□□ 0.1
TRIM39-209ENST00000428728 MMP21Q8N119 569 aa15.68■□□□□ 0.1
TRIM39-209ENST00000428728 NEIL3Q8TAT5 605 aa15.68■□□□□ 0.1
TRIM39-209ENST00000428728 ZNF592Q92610 1267 aa15.68■□□□□ 0.1
TRIM39-209ENST00000428728 FUT8Q9BYC5 575 aa15.68■□□□□ 0.1
TRIM39-209ENST00000428728 OR10A5Q9H207 317 aa15.68■□□□□ 0.1
TRIM39-209ENST00000428728 ADAM29Q9UKF5 820 aa15.68■□□□□ 0.1
TRIM39-209ENST00000428728 CAPN14A8MX76 684 aa15.67■□□□□ 0.1
TRIM39-209ENST00000428728 TP53I11O14683 189 aa15.67■□□□□ 0.1
TRIM39-209ENST00000428728 TRIM3O75382 744 aaPredicted RBP15.67■□□□□ 0.1
TRIM39-209ENST00000428728 GABRA1P14867 456 aa15.67■□□□□ 0.1
TRIM39-209ENST00000428728 MASP1P48740 699 aa15.67■□□□□ 0.1
TRIM39-209ENST00000428728 TMED10P49755 219 aaKnown RBP15.67■□□□□ 0.1
TRIM39-209ENST00000428728 XKP51811 444 aa15.67■□□□□ 0.1
TRIM39-209ENST00000428728 CDH13P55290 713 aa15.67■□□□□ 0.1
TRIM39-209ENST00000428728 NRG3P56975 720 aa15.67■□□□□ 0.1
TRIM39-209ENST00000428728 FUT7Q11130 342 aa15.67■□□□□ 0.1
TRIM39-209ENST00000428728 GGTA1PQ4G0N0 100 aa15.67■□□□□ 0.1
TRIM39-209ENST00000428728 TMEM198Q66K66 360 aa15.67■□□□□ 0.1
TRIM39-209ENST00000428728 LETMD1Q6P1Q0 360 aa15.67■□□□□ 0.1
TRIM39-209ENST00000428728 COMMD6Q7Z4G1 85 aa15.67■□□□□ 0.1
TRIM39-209ENST00000428728 CLYBLQ8N0X4 340 aa15.67■□□□□ 0.1
TRIM39-209ENST00000428728 METTL4Q8N3J2 472 aa15.67■□□□□ 0.1
TRIM39-209ENST00000428728 ZNF615Q8N8J6 731 aa15.67■□□□□ 0.1
TRIM39-209ENST00000428728 DCAKDQ8WVC6 231 aa15.67■□□□□ 0.1
TRIM39-209ENST00000428728 RILPQ96NA2 401 aa15.67■□□□□ 0.1
TRIM39-209ENST00000428728 HBEGFQ99075 208 aa15.67■□□□□ 0.1
TRIM39-209ENST00000428728 BRINP2Q9C0B6 783 aa15.67■□□□□ 0.1
TRIM39-209ENST00000428728 QPCTLQ9NXS2 382 aa15.67■□□□□ 0.1
TRIM39-209ENST00000428728 AHSPQ9NZD4 102 aa15.67■□□□□ 0.1
TRIM39-209ENST00000428728 DTX4Q9Y2E6 619 aa15.67■□□□□ 0.1
TRIM39-209ENST00000428728 NPFFR2Q9Y5X5 522 aa15.67■□□□□ 0.1
TRIM39-209ENST00000428728 MED12Q93074 2177 aa15.67■□□□□ 0.1
TRIM39-209ENST00000428728 A8MT66 165 aa15.66■□□□□ 0.1
TRIM39-209ENST00000428728 PPP6CO00743 305 aa15.66■□□□□ 0.1
TRIM39-209ENST00000428728 ERAL1O75616 437 aaKnown RBP15.66■□□□□ 0.1
TRIM39-209ENST00000428728 TRAPPC6AO75865 159 aa15.66■□□□□ 0.1
TRIM39-209ENST00000428728 OTCP00480 354 aa15.66■□□□□ 0.1
TRIM39-209ENST00000428728 PDYNP01213 254 aa15.66■□□□□ 0.1
TRIM39-209ENST00000428728 PORP16435 677 aaPredicted RBP15.66■□□□□ 0.1
TRIM39-209ENST00000428728 WNT3P56703 355 aa15.66■□□□□ 0.1
TRIM39-209ENST00000428728 DUSP8Q13202 625 aa15.66■□□□□ 0.1
TRIM39-209ENST00000428728 TBCELQ5QJ74 424 aa15.66■□□□□ 0.1
TRIM39-209ENST00000428728 TEX35Q5T0J7 233 aa15.66■□□□□ 0.1
TRIM39-209ENST00000428728 C10orf62Q5T681 223 aaPredicted RBP15.66■□□□□ 0.1
TRIM39-209ENST00000428728 ULK2Q8IYT8 1036 aa15.66■□□□□ 0.1
TRIM39-209ENST00000428728 VWA5B2Q8N398 1253 aa15.66■□□□□ 0.1
TRIM39-209ENST00000428728 MMGT1Q8N4V1 131 aa15.66■□□□□ 0.1
TRIM39-209ENST00000428728 SPPL2AQ8TCT8 520 aa15.66■□□□□ 0.1
TRIM39-209ENST00000428728 ZNF483Q8TF39 744 aaPredicted RBP15.66■□□□□ 0.1
TRIM39-209ENST00000428728 SELENOMQ8WWX9 145 aa15.66■□□□□ 0.1
TRIM39-209ENST00000428728 ADIPOR1Q96A54 375 aa15.66■□□□□ 0.1
TRIM39-209ENST00000428728 TP53INP1Q96A56 240 aa15.66■□□□□ 0.1
TRIM39-209ENST00000428728 MRPL57Q9BQC6 102 aaKnown RBP15.66■□□□□ 0.1
TRIM39-209ENST00000428728 TSPYL1Q9H0U9 437 aa15.66■□□□□ 0.1
TRIM39-209ENST00000428728 MRPL46Q9H2W6 279 aaKnown RBP15.66■□□□□ 0.1
TRIM39-209ENST00000428728 ACKR4Q9NPB9 350 aa15.66■□□□□ 0.1
TRIM39-209ENST00000428728 KCNN3Q9UGI6 736 aa15.66■□□□□ 0.1
TRIM39-209ENST00000428728 TACC2O95359 2948 aa15.66■□□□□ 0.1
TRIM39-209ENST00000428728 GOLGA6L10A6NI86 522 aa15.65■□□□□ 0.1
TRIM39-209ENST00000428728 KDM4EB2RXH2 506 aaPredicted RBP15.65■□□□□ 0.1
TRIM39-209ENST00000428728 FAM47E-STBD1D6RA91 191 aa15.65■□□□□ 0.1
TRIM39-209ENST00000428728 ZWINTO95229 277 aa15.65■□□□□ 0.1
TRIM39-209ENST00000428728 COL6A2P12110 1019 aa15.65■□□□□ 0.1
TRIM39-209ENST00000428728 KRT15P19012 456 aa15.65■□□□□ 0.1
TRIM39-209ENST00000428728 GPX3P22352 226 aa15.65■□□□□ 0.1
TRIM39-209ENST00000428728 CNTFP26441 200 aa15.65■□□□□ 0.1
TRIM39-209ENST00000428728 ABCD3P28288 659 aa15.65■□□□□ 0.1
TRIM39-209ENST00000428728 ECHS1P30084 290 aa15.65■□□□□ 0.1
TRIM39-209ENST00000428728 DEKP35659 375 aaKnown RBP15.65■□□□□ 0.1
TRIM39-209ENST00000428728 FEN1P39748 380 aaKnown RBP15.65■□□□□ 0.1
TRIM39-209ENST00000428728 GALNT1Q10472 559 aaPredicted RBP15.65■□□□□ 0.1
TRIM39-209ENST00000428728 SNTB1Q13884 538 aaKnown RBP15.65■□□□□ 0.1
TRIM39-209ENST00000428728 EXOSC7Q15024 291 aaKnown RBP15.65■□□□□ 0.1
TRIM39-209ENST00000428728 TOMM20Q15388 145 aa15.65■□□□□ 0.1
TRIM39-209ENST00000428728 SLC25A35Q3KQZ1 300 aa15.65■□□□□ 0.1
TRIM39-209ENST00000428728 RIPPLY2Q5TAB7 128 aa15.65■□□□□ 0.1
TRIM39-209ENST00000428728 CES4AQ5XG92 561 aa15.65■□□□□ 0.1
TRIM39-209ENST00000428728 FAM180BQ6P0A1 224 aa15.65■□□□□ 0.1
TRIM39-209ENST00000428728 FAM111BQ6SJ93 734 aa15.65■□□□□ 0.1
TRIM39-209ENST00000428728 KLHL29Q96CT2 875 aa15.65■□□□□ 0.1
TRIM39-209ENST00000428728 NXF5Q9H1B4 397 aaKnown RBP15.65■□□□□ 0.1
TRIM39-209ENST00000428728 RYDENQ9NUL5 291 aaKnown RBP15.65■□□□□ 0.1
TRIM39-209ENST00000428728 BCAP29Q9UHQ4 241 aa15.65■□□□□ 0.1
TRIM39-209ENST00000428728 PCDHA9Q9Y5H5 950 aa15.65■□□□□ 0.1
TRIM39-209ENST00000428728 CELSR1Q9NYQ6 3014 aa15.64■□□□□ 0.09
TRIM39-209ENST00000428728 A0A087WUV0 522 aaPredicted RBP15.64■□□□□ 0.09
TRIM39-209ENST00000428728 EXOC1LA0A1B0GW35 172 aa15.64■□□□□ 0.09
TRIM39-209ENST00000428728 C1orf226A1L170 272 aa15.64■□□□□ 0.09
TRIM39-209ENST00000428728 ANKRD33BA6NCL7 494 aa15.64■□□□□ 0.09
TRIM39-209ENST00000428728 GNB5O14775 395 aa15.64■□□□□ 0.09
TRIM39-209ENST00000428728 GUCY1B2O75343 617 aa15.64■□□□□ 0.09
TRIM39-209ENST00000428728 OR4F21O95013 312 aa15.64■□□□□ 0.09
TRIM39-209ENST00000428728 SBK3P0C264 359 aa15.64■□□□□ 0.09
TRIM39-209ENST00000428728 ALDH9A1P49189 494 aa15.64■□□□□ 0.09
TRIM39-209ENST00000428728 DLX5P56178 289 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms