RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 MS4A8Q9BY19 250 aa10.1□□□□□ -0.79
CUX1-205ENST00000425244 ZNF717Q9BY31 904 aaPredicted RBP10.1□□□□□ -0.79
CUX1-205ENST00000425244 WDR26Q9H7D7 661 aa10.1□□□□□ -0.79
CUX1-205ENST00000425244 SLC2A4RGQ9NR83 387 aa10.1□□□□□ -0.79
CUX1-205ENST00000425244 CLN6Q9NWW5 311 aa10.1□□□□□ -0.79
CUX1-205ENST00000425244 TEX10Q9NXF1 929 aaPredicted RBP10.1□□□□□ -0.79
CUX1-205ENST00000425244 TRPC4Q9UBN4 977 aa10.1□□□□□ -0.79
CUX1-205ENST00000425244 CYP8B1Q9UNU6 501 aa10.1□□□□□ -0.79
CUX1-205ENST00000425244 PLXND1Q9Y4D7 1925 aa10.1□□□□□ -0.79
CUX1-205ENST00000425244 GLOD5A6NK44 160 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 ADRA2AP08913 450 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 SLC35G4P0C7Q5 338 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 CHRNB1P11230 501 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 MAGP20916 626 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 GPC1P35052 558 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 BSGP35613 385 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 LIMS1P48059 325 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 RGS6P49758 472 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 CDK3Q00526 305 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 GAS6Q14393 721 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 SEC23BQ15437 767 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 TSTQ16762 297 aaKnown RBP10.09□□□□□ -0.79
CUX1-205ENST00000425244 UAP1L1Q3KQV9 507 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 MLIPQ5VWP3 458 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 FRMPD2BQ6IN97 320 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 PLEKHG7Q6ZR37 379 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 DEFB119Q8N690 84 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 AMER2Q8N7J2 671 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 AMER3Q8N944 861 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 GPR32P1Q8NGA4 272 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 OR5D16Q8NGK9 328 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 PDXPQ96GD0 296 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 MAPKAP1Q9BPZ7 522 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 MACROD1Q9BQ69 325 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 MIR1-1HGQ9H1L0 117 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 SEMA3GQ9NS98 782 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 FKBP14Q9NWM8 211 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 DNAJC27Q9NZQ0 273 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 METTL15A6NJ78 407 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 NDUFS4O43181 175 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 ZW10O43264 779 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 B4GALT2O60909 372 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 PRKRAO75569 313 aaKnown RBP10.09□□□□□ -0.79
CUX1-205ENST00000425244 OR12D1P0DN82 309 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 ACP5P13686 325 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 GLULP15104 373 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 EIF2B2P49770 351 aaKnown RBP10.09□□□□□ -0.79
CUX1-205ENST00000425244 PRKAG1P54619 331 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 TUBA1BP68363 451 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 INAVAQ3KP66 663 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 C6orf183Q5T699 404 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 SAXO2Q658L1 398 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 LINC00299Q6ZSB3 139 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 TUBA1AQ71U36 451 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 RD3Q7Z3Z2 195 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 KBTBD8Q8NFY9 601 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 OR5K2Q8NHB8 316 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 XAGE5Q8WWM1 108 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 HTRA1Q92743 480 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 C17orf62Q9BQA9 187 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 WFDC6Q9BQY6 131 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 BTBD1Q9H0C5 482 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 IMP3Q9NV31 184 aaKnown RBP10.09□□□□□ -0.79
CUX1-205ENST00000425244 SEC14L3Q9UDX4 400 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 IFT52Q9Y366 437 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 POM121BA6NF01 834 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 ZAR1LA6NP61 321 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 MAN2B1O00754 1011 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 ENTPD6O75354 484 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 ALPPL2P10696 532 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 TGM1P22735 817 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 CXCR2P25025 360 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 CCT3P49368 545 aaKnown RBP10.09□□□□□ -0.79
CUX1-205ENST00000425244 HMGA2P52926 109 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 PPP5CP53041 499 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 ZP2Q05996 745 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 TPRG1LQ5T0D9 272 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 DCST1Q5T197 706 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 BPHLQ86WA6 291 aaPredicted RBP10.09□□□□□ -0.79
CUX1-205ENST00000425244 NUDT13Q86X67 352 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 SMPDL3AQ92484 453 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 FERD3LQ96RJ6 166 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 YIPF4Q9BSR8 244 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 RSPO3Q9BXY4 272 aaPredicted RBP10.09□□□□□ -0.79
CUX1-205ENST00000425244 UCK2Q9BZX2 261 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 MMP27Q9H306 513 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 EXOSC4Q9NPD3 245 aaKnown RBP10.09□□□□□ -0.79
CUX1-205ENST00000425244 CTPS2Q9NRF8 586 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 FTSJ1Q9UET6 329 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 ENOPH1Q9UHY7 261 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 ICKQ9UPZ9 632 aa10.09□□□□□ -0.79
CUX1-205ENST00000425244 EFCAB10A6NFE3 127 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 TLR4O00206 839 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 HMGN4O00479 90 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 DSCR3O14972 297 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 SEMA7AO75326 666 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 MFN2O95140 757 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 RPN2P04844 631 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 CKMT1AP12532 417 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 TNNI3P19429 210 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms