RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 ABCA2Q9BZC7 2435 aa13.69□□□□□ -0.22
ATG4B-209ENST00000425239 C15orf38-AP3S2A0A0A6YYH1 394 aa13.68□□□□□ -0.22
ATG4B-209ENST00000425239 SUPT3HB4E1H0 165 aa13.68□□□□□ -0.22
ATG4B-209ENST00000425239 FOXE1O00358 373 aaPredicted RBP13.68□□□□□ -0.22
ATG4B-209ENST00000425239 UGDHO60701 494 aa13.68□□□□□ -0.22
ATG4B-209ENST00000425239 SUPT3HO75486 399 aa13.68□□□□□ -0.22
ATG4B-209ENST00000425239 GBAP04062 536 aa13.68□□□□□ -0.22
ATG4B-209ENST00000425239 S100BP04271 92 aaPredicted RBP13.68□□□□□ -0.22
ATG4B-209ENST00000425239 GSTA2P09210 222 aa13.68□□□□□ -0.22
ATG4B-209ENST00000425239 LTA4HP09960 611 aaKnown RBP13.68□□□□□ -0.22
ATG4B-209ENST00000425239 TACR1P25103 407 aa13.68□□□□□ -0.22
ATG4B-209ENST00000425239 PTPN6P29350 595 aa13.68□□□□□ -0.22
ATG4B-209ENST00000425239 CRABP2P29373 138 aa13.68□□□□□ -0.22
ATG4B-209ENST00000425239 PTGDSP41222 190 aa13.68□□□□□ -0.22
ATG4B-209ENST00000425239 NEK2P51955 445 aa13.68□□□□□ -0.22
ATG4B-209ENST00000425239 RAP1GDS1P52306 607 aa13.68□□□□□ -0.22
ATG4B-209ENST00000425239 NAGLUP54802 743 aa13.68□□□□□ -0.22
ATG4B-209ENST00000425239 IRF9Q00978 393 aa13.68□□□□□ -0.22
ATG4B-209ENST00000425239 PCBP2Q15366 365 aaKnown RBP eCLIP13.68□□□□□ -0.222e-6■■■■□ 21.9
ATG4B-209ENST00000425239 TRADDQ15628 312 aa13.68□□□□□ -0.22
ATG4B-209ENST00000425239 EIPR1Q53HC9 387 aa13.68□□□□□ -0.22
ATG4B-209ENST00000425239 TMEM81Q6P7N7 255 aa13.68□□□□□ -0.22
ATG4B-209ENST00000425239 CAMKMTQ7Z624 323 aa13.68□□□□□ -0.22
ATG4B-209ENST00000425239 ADGRE4PQ86SQ3 457 aa13.68□□□□□ -0.22
ATG4B-209ENST00000425239 TAGAPQ8N103 731 aa13.68□□□□□ -0.22
ATG4B-209ENST00000425239 LIX1Q8N485 282 aa13.68□□□□□ -0.22
ATG4B-209ENST00000425239 C17orf47Q8NEP4 570 aa13.68□□□□□ -0.22
ATG4B-209ENST00000425239 WFDC11Q8NEX6 87 aa13.68□□□□□ -0.22
ATG4B-209ENST00000425239 LINC01560Q8TB33 94 aa13.68□□□□□ -0.22
ATG4B-209ENST00000425239 KCTD4Q8WVF5 259 aa13.68□□□□□ -0.22
ATG4B-209ENST00000425239 TMEM41AQ96HV5 264 aa13.68□□□□□ -0.22
ATG4B-209ENST00000425239 ZNF597Q96LX8 424 aa13.68□□□□□ -0.22
ATG4B-209ENST00000425239 OR10A5Q9H207 317 aa13.68□□□□□ -0.22
ATG4B-209ENST00000425239 TEX10Q9NXF1 929 aaPredicted RBP13.68□□□□□ -0.22
ATG4B-209ENST00000425239 TXNDC16Q9P2K2 825 aa13.68□□□□□ -0.22
ATG4B-209ENST00000425239 CES1P1Q9UKY3 287 aa13.68□□□□□ -0.22
ATG4B-209ENST00000425239 OR7A17O14581 309 aa13.67□□□□□ -0.22
ATG4B-209ENST00000425239 TP53I11O14683 189 aa13.67□□□□□ -0.22
ATG4B-209ENST00000425239 OR10H2O60403 315 aa13.67□□□□□ -0.22
ATG4B-209ENST00000425239 TRAPPC6AO75865 159 aa13.67□□□□□ -0.22
ATG4B-209ENST00000425239 IL18BPO95998 194 aa13.67□□□□□ -0.22
ATG4B-209ENST00000425239 IL2RAP01589 272 aa13.67□□□□□ -0.22
ATG4B-209ENST00000425239 ABCB1P08183 1280 aaPredicted RBP13.67□□□□□ -0.22
ATG4B-209ENST00000425239 NR2F6P10588 404 aa13.67□□□□□ -0.22
ATG4B-209ENST00000425239 ABCD3P28288 659 aa13.67□□□□□ -0.22
ATG4B-209ENST00000425239 AGFG1P52594 562 aaKnown RBP13.67□□□□□ -0.22
ATG4B-209ENST00000425239 PPP2R2AP63151 447 aa13.67□□□□□ -0.22
ATG4B-209ENST00000425239 FOXF2Q12947 444 aa13.67□□□□□ -0.22
ATG4B-209ENST00000425239 CPSF6Q16630 551 aaKnown RBP eCLIP13.67□□□□□ -0.22
ATG4B-209ENST00000425239 DEFB113Q30KQ7 82 aa13.67□□□□□ -0.22
ATG4B-209ENST00000425239 TIGD3Q6B0B8 471 aa13.67□□□□□ -0.22
ATG4B-209ENST00000425239 PM20D2Q8IYS1 436 aa13.67□□□□□ -0.22
ATG4B-209ENST00000425239 PPM1NQ8N819 430 aa13.67□□□□□ -0.22
ATG4B-209ENST00000425239 SIMC1Q8NDZ2 872 aa13.67□□□□□ -0.22
ATG4B-209ENST00000425239 GOT1L1Q8NHS2 421 aaPredicted RBP13.67□□□□□ -0.22
ATG4B-209ENST00000425239 HGDQ93099 445 aa13.67□□□□□ -0.22
ATG4B-209ENST00000425239 SMR3AQ99954 134 aa13.67□□□□□ -0.22
ATG4B-209ENST00000425239 G6PC3Q9BUM1 346 aa13.67□□□□□ -0.22
ATG4B-209ENST00000425239 DPH5Q9H2P9 285 aa13.67□□□□□ -0.22
ATG4B-209ENST00000425239 IPPKQ9H8X2 491 aa13.67□□□□□ -0.22
ATG4B-209ENST00000425239 CALHM2Q9HA72 323 aa13.67□□□□□ -0.22
ATG4B-209ENST00000425239 SNX15Q9NRS6 342 aa13.67□□□□□ -0.22
ATG4B-209ENST00000425239 RNF14Q9UBS8 474 aa13.67□□□□□ -0.22
ATG4B-209ENST00000425239 MTRF1LQ9UGC7 380 aaKnown RBP13.67□□□□□ -0.22
ATG4B-209ENST00000425239 ZNF639Q9UID6 485 aa13.67□□□□□ -0.22
ATG4B-209ENST00000425239 TUBAL3A6NHL2 446 aa13.66□□□□□ -0.22
ATG4B-209ENST00000425239 RAD51CO43502 376 aa13.66□□□□□ -0.22
ATG4B-209ENST00000425239 SIX3O95343 332 aaPredicted RBP13.66□□□□□ -0.22
ATG4B-209ENST00000425239 RAF1P04049 648 aa13.66□□□□□ -0.22
ATG4B-209ENST00000425239 C2P06681 752 aa13.66□□□□□ -0.22
ATG4B-209ENST00000425239 CPN1P15169 458 aa13.66□□□□□ -0.22
ATG4B-209ENST00000425239 GPX3P22352 226 aa13.66□□□□□ -0.22
ATG4B-209ENST00000425239 CTSSP25774 331 aa13.66□□□□□ -0.22
ATG4B-209ENST00000425239 ALDH18A1P54886 795 aaKnown RBP13.66□□□□□ -0.22
ATG4B-209ENST00000425239 GNG11P61952 73 aa13.66□□□□□ -0.22
ATG4B-209ENST00000425239 SORDQ00796 357 aa13.66□□□□□ -0.22
ATG4B-209ENST00000425239 GTF2H2Q13888 395 aa13.66□□□□□ -0.22
ATG4B-209ENST00000425239 PFKFB4Q16877 469 aa13.66□□□□□ -0.22
ATG4B-209ENST00000425239 WIPI1Q5MNZ9 446 aaPredicted RBP13.66□□□□□ -0.22
ATG4B-209ENST00000425239 GTF2H2CQ6P1K8 395 aa13.66□□□□□ -0.22
ATG4B-209ENST00000425239 ZDHHC24Q6UX98 284 aa13.66□□□□□ -0.22
ATG4B-209ENST00000425239 RAPH1Q70E73 1250 aa13.66□□□□□ -0.22
ATG4B-209ENST00000425239 GOLGA7Q7Z5G4 137 aa13.66□□□□□ -0.22
ATG4B-209ENST00000425239 TBC1D1Q86TI0 1168 aaPredicted RBP13.66□□□□□ -0.22
ATG4B-209ENST00000425239 PACS2Q86VP3 889 aa13.66□□□□□ -0.22
ATG4B-209ENST00000425239 CTAGE3PQ8IX95 158 aa13.66□□□□□ -0.22
ATG4B-209ENST00000425239 C9orf106Q8NAJ2 232 aa13.66□□□□□ -0.22
ATG4B-209ENST00000425239 ZPLD1Q8TCW7 415 aa13.66□□□□□ -0.22
ATG4B-209ENST00000425239 FBF1Q8TES7 1133 aa13.66□□□□□ -0.22
ATG4B-209ENST00000425239 UCN2Q96RP3 112 aa13.66□□□□□ -0.22
ATG4B-209ENST00000425239 NAPGQ99747 312 aaPredicted RBP13.66□□□□□ -0.22
ATG4B-209ENST00000425239 NXF5Q9H1B4 397 aaKnown RBP13.66□□□□□ -0.22
ATG4B-209ENST00000425239 ACTR8Q9H981 624 aa13.66□□□□□ -0.22
ATG4B-209ENST00000425239 ACOT9Q9Y305 439 aa13.66□□□□□ -0.22
ATG4B-209ENST00000425239 ANK3Q12955 4377 aaKnown RBP13.65□□□□□ -0.22
ATG4B-209ENST00000425239 CCDC189A1A4V9 331 aa13.65□□□□□ -0.22
ATG4B-209ENST00000425239 FAM187AA6NFU0 413 aa13.65□□□□□ -0.22
ATG4B-209ENST00000425239 CAPN14A8MX76 684 aa13.65□□□□□ -0.22
ATG4B-209ENST00000425239 HRGP04196 525 aa13.65□□□□□ -0.22
ATG4B-209ENST00000425239 NAGAP17050 411 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms