RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 PRPH2P23942 346 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 MST1P26927 711 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 SSTR4P31391 388 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 MPIP34949 423 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 SERPINB4P48594 390 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 TMED10P49755 219 aaKnown RBP10.12□□□□□ -0.79
USP49-204ENST00000423567 PER3P56645 1201 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 GPR85P60893 370 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 PLGLB1Q02325 96 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 C2orf80Q0P641 193 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 EBPQ15125 230 aaKnown RBP10.12□□□□□ -0.79
USP49-204ENST00000423567 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.12□□□□□ -0.79
USP49-204ENST00000423567 ZNF750Q32MQ0 723 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 SH2D4BQ5SQS7 431 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 NOXRED1Q6NXP6 359 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 CLEC18BQ6UXF7 455 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 RNF165Q6ZSG1 346 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 IKBIPQ70UQ0 350 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 MDGA2Q7Z553 956 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 EXOC3L1Q86VI1 746 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 ZNF227Q86WZ6 799 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 CPSF7Q8N684 471 aaKnown RBP10.12□□□□□ -0.79
USP49-204ENST00000423567 CLEC18CQ8NCF0 446 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 SSC4DQ8WTU2 575 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 TWIST2Q8WVJ9 160 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 TP53INP1Q96A56 240 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 SPACA9Q96E40 222 aaPredicted RBP10.12□□□□□ -0.79
USP49-204ENST00000423567 C11orf24Q96F05 449 aaPredicted RBP10.12□□□□□ -0.79
USP49-204ENST00000423567 CNRIP1Q96F85 164 aaPredicted RBP10.12□□□□□ -0.79
USP49-204ENST00000423567 MAGED4Q96JG8 741 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 GPR137Q96N19 417 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 BBS4Q96RK4 519 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 TNFRSF12AQ9NP84 129 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 MYNNQ9NPC7 610 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 PRODH2Q9UF12 536 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 NPIPA1Q9UND3 350 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 DNAJC15Q9Y5T4 150 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 UBR5O95071 2799 aaPredicted RBP10.12□□□□□ -0.79
USP49-204ENST00000423567 A0A1B0GUH1 482 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 WDR91A4D1P6 747 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 NPIPB8E9PQR5 432 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 ACOT7O00154 380 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 TP53I11O14683 189 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 SEMA7AO75326 666 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 BCAS2O75934 225 aaPredicted RBP10.11□□□□□ -0.79
USP49-204ENST00000423567 HSPA4LO95757 839 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 CT62P0C5K7 136 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 LINC00032P0C843 101 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 MAPK1P28482 360 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 NTSP30990 170 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 ETV4P43268 484 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 NR0B1P51843 470 aaKnown RBP10.11□□□□□ -0.79
USP49-204ENST00000423567 KCNK10P57789 538 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 RPL38P63173 70 aaKnown RBP10.11□□□□□ -0.79
USP49-204ENST00000423567 RPP38P78345 283 aaKnown RBP10.11□□□□□ -0.79
USP49-204ENST00000423567 MAP4K2Q12851 820 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 PRICKLE4Q2TBC4 344 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 C4orf17Q53FE4 359 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 SLC22A10Q63ZE4 541 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 FAM180BQ6P0A1 224 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 BRICD5Q6PL45 260 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 GK5Q6ZS86 529 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 FAM47EQ6ZV65 393 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 TICAM1Q8IUC6 712 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 CCDC116Q8IYX3 515 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 FAM9CQ8IZT9 166 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 GHDCQ8N2G8 530 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 FAM13CQ8NE31 585 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 C17orf47Q8NEP4 570 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 ADCY4Q8NFM4 1077 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 AGR3Q8TD06 166 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 ERP27Q96DN0 273 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 PKNOX2Q96KN3 472 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 CCT7Q99832 543 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 FAM173AQ9BQD7 235 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 REPIN1Q9BWE0 567 aaKnown RBP10.11□□□□□ -0.79
USP49-204ENST00000423567 TSPAN10Q9H1Z9 355 aaPredicted RBP10.11□□□□□ -0.79
USP49-204ENST00000423567 SLC35C2Q9NQQ7 365 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 MAT2BQ9NZL9 334 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 TMED5Q9Y3A6 229 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 TENM4Q6N022 2769 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 SHANK1Q9Y566 2161 aa10.11□□□□□ -0.79
USP49-204ENST00000423567 TRGV8A0A0C4DH27 118 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 TMEM114B3SHH9 223 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 TMEM233B4DJY2 109 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 PIP5K1BO14986 540 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 LRRTM2O43300 516 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 ASNA1O43681 348 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 SNUPNO95149 360 aaKnown RBP10.1□□□□□ -0.79
USP49-204ENST00000423567 NADKO95544 446 aaPredicted RBP10.1□□□□□ -0.79
USP49-204ENST00000423567 CLPSP04118 112 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 SERPINE1P05121 402 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 FBXO45P0C2W1 286 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 DDX5P17844 614 aaKnown RBP10.1□□□□□ -0.79
USP49-204ENST00000423567 CNR1P21554 472 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 GRK2P25098 689 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 ASMTP46597 345 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 DCAF7P61962 342 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 SRSF1Q07955 248 aaKnown RBP eCLIP10.1□□□□□ -0.79
USP49-204ENST00000423567 CHI3L2Q15782 390 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms