RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 MBL2P11226 248 aaPredicted RBP2.77□□□□□ -1.97
LINC00397-201ENST00000422074 AREGP15514 252 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 UGT1A6P19224 532 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 GLRA1P23415 457 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 MARCKSP29966 332 aaPredicted RBP2.77□□□□□ -1.97
LINC00397-201ENST00000422074 ID1P41134 155 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 ALDH3B1P43353 468 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 RGRP47804 291 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 NT5C2P49902 561 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 IST1P53990 364 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 GEMP55040 296 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 GSTO1P78417 241 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 PPP1R8Q12972 351 aaKnown RBP2.77□□□□□ -1.97
LINC00397-201ENST00000422074 RFTN1Q14699 578 aaPredicted RBP2.77□□□□□ -1.97
LINC00397-201ENST00000422074 ABRAXAS2Q15018 415 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 TGIF1Q15583 401 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 C1orf189Q5VU69 101 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 WDR25Q64LD2 544 aaPredicted RBP2.77□□□□□ -1.97
LINC00397-201ENST00000422074 RTL6Q6ICC9 239 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 C17orf64Q86WR6 236 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 STHQ8IWL8 128 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 SFRP1Q8N474 314 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 ARL10Q8N8L6 244 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 LEMD2Q8NC56 503 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 OR4L1Q8NH43 312 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 OR4A16Q8NH70 328 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 ESAMQ96AP7 390 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 NUS1Q96E22 293 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 PCED1BQ96HM7 432 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 S1PR3Q99500 378 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 AGPAT1Q99943 283 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 FUNDC2Q9BWH2 189 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 TSPYL1Q9H0U9 437 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 SLC26A1Q9H2B4 701 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 GANQ9H2C0 597 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 THAP9Q9H5L6 903 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 PDFQ9HBH1 243 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 ZNF275Q9NSD4 429 aaPredicted RBP2.77□□□□□ -1.97
LINC00397-201ENST00000422074 DDX28Q9NUL7 540 aaKnown RBP2.77□□□□□ -1.97
LINC00397-201ENST00000422074 NDUFA13Q9P0J0 144 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 VPS54Q9P1Q0 977 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 ERVK-18Q9QC07 812 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 KNSTRNQ9Y448 316 aa2.77□□□□□ -1.97
LINC00397-201ENST00000422074 RNF212BA8MTL3 300 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 SLC28A1O00337 649 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 CHEK1O14757 476 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 MCF2LO15068 1137 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 RHBDL1O75783 438 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 ANXA9O76027 345 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 MMP10P09238 476 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 STMN1P16949 149 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 GPX3P22352 226 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 OR1D2P34982 312 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 ACADSBP45954 432 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 TNFSF10P50591 281 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 ERVPABLB-1P60509 514 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 HERV-K104P63124 156 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 CDKL1Q00532 357 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 TSTA3Q13630 321 aaPredicted RBP2.76□□□□□ -1.97
LINC00397-201ENST00000422074 GK2Q14410 553 aaPredicted RBP2.76□□□□□ -1.97
LINC00397-201ENST00000422074 MEF2DQ14814 521 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 SLC17A1Q14916 467 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 OR1C1Q15619 314 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 CARTPTQ16568 116 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 WSCD2Q2TBF2 565 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 ANKRD55Q3KP44 614 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 MPPE1Q53F39 396 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 ZNF410Q86VK4 478 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 CNTN4Q8IWV2 1026 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 SLC22A18ASQ8N1D0 253 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 OR6M1Q8NGM8 313 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 GOLGA5Q8TBA6 731 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 RNASE8Q8TDE3 154 aaKnown RBP2.76□□□□□ -1.97
LINC00397-201ENST00000422074 CCDC47Q96A33 483 aaKnown RBP2.76□□□□□ -1.97
LINC00397-201ENST00000422074 MRPL24Q96A35 216 aaKnown RBP2.76□□□□□ -1.97
LINC00397-201ENST00000422074 C16orf58Q96GQ5 468 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 RPGRIP1Q96KN7 1286 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 RAB40CQ96S21 281 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 SPAG8Q99932 426 aaPredicted RBP2.76□□□□□ -1.97
LINC00397-201ENST00000422074 TTYH2Q9BSA4 534 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 TEX13AQ9BXU3 409 aaPredicted RBP2.76□□□□□ -1.97
LINC00397-201ENST00000422074 WWP1Q9H0M0 922 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 DDX47Q9H0S4 455 aaKnown RBP2.76□□□□□ -1.97
LINC00397-201ENST00000422074 DPEP3Q9H4B8 488 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 DCLRE1BQ9H816 532 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 ELL3Q9HB65 397 aaPredicted RBP2.76□□□□□ -1.97
LINC00397-201ENST00000422074 ABCC13Q9NSE7 274 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 PNPLA3Q9NST1 481 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 IL17CQ9P0M4 197 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 MLXQ9UH92 298 aa2.76□□□□□ -1.97
LINC00397-201ENST00000422074 KIF7Q2M1P5 1343 aa2.75□□□□□ -1.97
LINC00397-201ENST00000422074 MACROD2A1Z1Q3 448 aa2.75□□□□□ -1.97
LINC00397-201ENST00000422074 DUSP11O75319 330 aaKnown RBP2.75□□□□□ -1.97
LINC00397-201ENST00000422074 STBD1O95210 358 aa2.75□□□□□ -1.97
LINC00397-201ENST00000422074 OLFM2O95897 454 aa2.75□□□□□ -1.97
LINC00397-201ENST00000422074 CT45A8P0DMV1 189 aa2.75□□□□□ -1.97
LINC00397-201ENST00000422074 CT45A9P0DMV2 189 aa2.75□□□□□ -1.97
LINC00397-201ENST00000422074 CALML3P27482 149 aa2.75□□□□□ -1.97
LINC00397-201ENST00000422074 MDH2P40926 338 aaKnown RBP2.75□□□□□ -1.97
LINC00397-201ENST00000422074 CCZ1BP86790 482 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms