RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 RPS14P62263 151 aaKnown RBP13.79□□□□□ -0.2
CHRD-204ENST00000420973 CDK5R2Q13319 367 aa13.79□□□□□ -0.2
CHRD-204ENST00000420973 TIGD6Q17RP2 521 aa13.79□□□□□ -0.2
CHRD-204ENST00000420973 LUZP2Q86TE4 346 aa13.79□□□□□ -0.2
CHRD-204ENST00000420973 ZNF740Q8NDX6 193 aa13.79□□□□□ -0.2
CHRD-204ENST00000420973 SETD6Q8TBK2 473 aa13.79□□□□□ -0.2
CHRD-204ENST00000420973 FRS2Q8WU20 508 aa13.79□□□□□ -0.2
CHRD-204ENST00000420973 RBCK1Q9BYM8 510 aa13.79□□□□□ -0.2
CHRD-204ENST00000420973 SLC19A3Q9BZV2 496 aa13.79□□□□□ -0.2
CHRD-204ENST00000420973 SLC22A11Q9NSA0 550 aa13.79□□□□□ -0.2
CHRD-204ENST00000420973 SDHAF2Q9NX18 166 aa13.79□□□□□ -0.2
CHRD-204ENST00000420973 PPIEQ9UNP9 301 aaKnown RBP13.79□□□□□ -0.2
CHRD-204ENST00000420973 A0A0A6YYJ9 748 aa13.79□□□□□ -0.2
CHRD-204ENST00000420973 ASPDHA6ND91 283 aa13.79□□□□□ -0.2
CHRD-204ENST00000420973 RPLP0P05388 317 aaKnown RBP13.79□□□□□ -0.2
CHRD-204ENST00000420973 TSPAN19P0C672 248 aa13.79□□□□□ -0.2
CHRD-204ENST00000420973 CBR1P16152 277 aa13.79□□□□□ -0.2
CHRD-204ENST00000420973 CD72P21854 359 aa13.79□□□□□ -0.2
CHRD-204ENST00000420973 MASP1P48740 699 aa13.79□□□□□ -0.2
CHRD-204ENST00000420973 PGDP52209 483 aa13.79□□□□□ -0.2
CHRD-204ENST00000420973 CSNK2BP67870 215 aa13.79□□□□□ -0.2
CHRD-204ENST00000420973 HTRA4P83105 476 aaPredicted RBP13.79□□□□□ -0.2
CHRD-204ENST00000420973 RAPSNQ13702 412 aa13.79□□□□□ -0.2
CHRD-204ENST00000420973 TEAD4Q15561 434 aa13.79□□□□□ -0.2
CHRD-204ENST00000420973 MACC1Q6ZN28 852 aa13.79□□□□□ -0.2
CHRD-204ENST00000420973 THOC6Q86W42 341 aaKnown RBP13.79□□□□□ -0.2
CHRD-204ENST00000420973 LRRC17Q8N6Y2 441 aa13.79□□□□□ -0.2
CHRD-204ENST00000420973 PLA2G15Q8NCC3 412 aa13.79□□□□□ -0.2
CHRD-204ENST00000420973 OR4K1Q8NGD4 311 aa13.79□□□□□ -0.2
CHRD-204ENST00000420973 OR14C36Q8NHC7 312 aa13.79□□□□□ -0.2
CHRD-204ENST00000420973 UTP15Q8TED0 518 aaKnown RBP13.79□□□□□ -0.2
CHRD-204ENST00000420973 HOPXQ9BPY8 73 aaPredicted RBP13.79□□□□□ -0.2
CHRD-204ENST00000420973 WDR77Q9BQA1 342 aaPredicted RBP13.79□□□□□ -0.2
CHRD-204ENST00000420973 AMBRA1Q9C0C7 1298 aa13.79□□□□□ -0.2
CHRD-204ENST00000420973 IKZF5Q9H5V7 419 aa13.79□□□□□ -0.2
CHRD-204ENST00000420973 GALNT9Q9HCQ5 603 aa13.79□□□□□ -0.2
CHRD-204ENST00000420973 UTS2RQ9UKP6 389 aa13.79□□□□□ -0.2
CHRD-204ENST00000420973 SEC16AO15027 2179 aa13.79□□□□□ -0.2
CHRD-204ENST00000420973 SPTBN5Q9NRC6 3674 aaKnown RBP13.79□□□□□ -0.2
CHRD-204ENST00000420973 RFXANKO14593 260 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 GATCO43716 136 aaKnown RBP13.78□□□□□ -0.2
CHRD-204ENST00000420973 SNX4O95219 450 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 CST1P01037 141 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 AOAHP28039 575 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 BAMBIQ13145 260 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 LYPLAL1Q5VWZ2 237 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 CLECL1Q8IZS7 167 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 PGBD3Q8N328 593 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 C1orf52Q8N6N3 182 aaKnown RBP13.78□□□□□ -0.2
CHRD-204ENST00000420973 ARRDC3Q96B67 414 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 ZNF707Q96C28 371 aaPredicted RBP13.78□□□□□ -0.2
CHRD-204ENST00000420973 NUS1Q96E22 293 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 XKR8Q9H6D3 395 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 ACOT13Q9NPJ3 140 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 KCNK6Q9Y257 313 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 FAM234BA2RU67 622 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 POM121BA6NF01 834 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 RTCAO00442 366 aaKnown RBP13.78□□□□□ -0.2
CHRD-204ENST00000420973 DSCR3O14972 297 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 MID1O15344 667 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 NFATC1O95644 943 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 HK1P19367 917 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 PTX3P26022 381 aaPredicted RBP13.78□□□□□ -0.2
CHRD-204ENST00000420973 ZNF91Q05481 1191 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 RASGRP3Q8IV61 690 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 FAM86B1Q8N7N1 296 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 OR5AK3PQ8NH89 298 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 GPR151Q8TDV0 419 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 EXOSC8Q96B26 276 aaKnown RBP13.78□□□□□ -0.2
CHRD-204ENST00000420973 MACROD1Q9BQ69 325 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 PELOQ9BRX2 385 aaKnown RBP13.78□□□□□ -0.2
CHRD-204ENST00000420973 LIPT1Q9Y234 373 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 MAB21L2Q9Y586 359 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 MAGEB17A8MXT2 336 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 SIGLEC5O15389 551 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 TOXO94900 526 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 RAF1P04049 648 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 ACP5P13686 325 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 IGFBP4P22692 258 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 SIGLEC14Q08ET2 396 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 CNTN1Q12860 1018 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 DOC2AQ14183 400 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 RCAN2Q14206 197 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 CDKN3Q16667 212 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 ZXDCQ2QGD7 858 aaPredicted RBP13.78□□□□□ -0.2
CHRD-204ENST00000420973 SYT6Q5T7P8 510 aaPredicted RBP13.78□□□□□ -0.2
CHRD-204ENST00000420973 FRG2Q64ET8 278 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 NLGN4YQ8NFZ3 816 aaPredicted RBP13.78□□□□□ -0.2
CHRD-204ENST00000420973 VN1R2Q8NFZ6 395 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 BTN2A2Q8WVV5 523 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 TMEM125Q96AQ2 219 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 FRG2BQ96QU4 278 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 ESRP2Q9H6T0 727 aaKnown RBP13.78□□□□□ -0.2
CHRD-204ENST00000420973 SLC6A13Q9NSD5 602 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 HCN3Q9P1Z3 774 aa13.78□□□□□ -0.2
CHRD-204ENST00000420973 PLXNA3P51805 1871 aa13.77□□□□□ -0.2
CHRD-204ENST00000420973 LY86O95711 162 aa13.77□□□□□ -0.2
CHRD-204ENST00000420973 LGALS3BPQ08380 585 aa13.77□□□□□ -0.2
CHRD-204ENST00000420973 PCBP2Q15366 365 aaKnown RBP eCLIP13.77□□□□□ -0.21e-32■■■■□ 19.7
CHRD-204ENST00000420973 UAP1L1Q3KQV9 507 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms