RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 GLIPR2Q9H4G4 154 aa6.98□□□□□ -1.29
BDNF-209ENST00000420794 KAT8Q9H7Z6 458 aaKnown RBP6.98□□□□□ -1.29
BDNF-209ENST00000420794 ZC4H2Q9NQZ6 224 aa6.98□□□□□ -1.29
BDNF-209ENST00000420794 C14orf105Q9NVL8 296 aa6.98□□□□□ -1.29
BDNF-209ENST00000420794 TAS2R7Q9NYW3 318 aa6.98□□□□□ -1.29
BDNF-209ENST00000420794 NXT1Q9UKK6 140 aaKnown RBP6.98□□□□□ -1.29
BDNF-209ENST00000420794 IGKV1-8A0A0C4DH67 115 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 DSCR3O14972 297 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 TBX19O60806 448 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 HMGN2P05204 90 aaKnown RBP6.97□□□□□ -1.29
BDNF-209ENST00000420794 ZNF883P0CG24 379 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 HOXB3P14651 431 aaPredicted RBP6.97□□□□□ -1.29
BDNF-209ENST00000420794 GABRA3P34903 492 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 RAB15P59190 212 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 ARPC4P59998 168 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 RPS26P62854 115 aaKnown RBP6.97□□□□□ -1.29
BDNF-209ENST00000420794 SPIBQ01892 262 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 GPR68Q15743 365 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 RIMKLAQ8IXN7 391 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 ST13P4Q8IZP2 240 aaPredicted RBP6.97□□□□□ -1.29
BDNF-209ENST00000420794 OR5T3Q8NGG3 340 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 GEMIN6Q8WXD5 167 aaKnown RBP6.97□□□□□ -1.29
BDNF-209ENST00000420794 PMM1Q92871 262 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 CPPED1Q9BRF8 314 aaPredicted RBP6.97□□□□□ -1.29
BDNF-209ENST00000420794 MENTQ9BUN1 341 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 SEMA4GQ9NTN9 838 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 C17orf105B2RV13 164 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 STMND1H3BQB6 276 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 ANKRD28O15084 1053 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 P2RX6O15547 441 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 RFPL3O75679 317 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 CLCN2P51788 898 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 RUNX2Q13950 521 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 ERV3-1Q14264 604 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 SF3A2Q15428 464 aaKnown RBP6.97□□□□□ -1.29
BDNF-209ENST00000420794 NKAIN1Q4KMZ8 207 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 CYBRD1Q53TN4 286 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 ZNF311Q5JNZ3 666 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 DLEU7Q6UYE1 221 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 ZNF793Q6ZN11 406 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 VN1R5Q7Z5H4 357 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 HIPK1Q86Z02 1210 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 IL22RA1Q8N6P7 574 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 ZNF527Q8NB42 609 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 VANGL1Q8TAA9 524 aaPredicted RBP6.97□□□□□ -1.29
BDNF-209ENST00000420794 ZFP90Q8TF47 636 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 ABTB1Q969K4 478 aaPredicted RBP6.97□□□□□ -1.29
BDNF-209ENST00000420794 OR1F2PQ96R84 312 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 G6PC3Q9BUM1 346 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 IFT52Q9Y366 437 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 CLOCKO15516 846 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 BRINP1O60477 761 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 PRKRAO75569 313 aaKnown RBP6.97□□□□□ -1.29
BDNF-209ENST00000420794 OPN1SWP03999 348 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 HNRNPCP07910 306 aaKnown RBP eCLIP6.97□□□□□ -1.29
BDNF-209ENST00000420794 CDKN2CP42773 168 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 CDK9P50750 372 aaKnown RBP6.97□□□□□ -1.29
BDNF-209ENST00000420794 C21orf58P58505 322 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 MRPS35P82673 323 aaKnown RBP6.97□□□□□ -1.29
BDNF-209ENST00000420794 TMEM64Q6YI46 380 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 RAB11FIP2Q7L804 512 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 RANBP3LQ86VV4 465 aaPredicted RBP6.97□□□□□ -1.29
BDNF-209ENST00000420794 NAXDQ8IW45 347 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 CA13Q8N1Q1 262 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 D2HGDHQ8N465 521 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 ZNF578Q96N58 590 aaPredicted RBP6.97□□□□□ -1.29
BDNF-209ENST00000420794 TSC22D3Q99576 134 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 NDEL1Q9GZM8 345 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 PRDM9Q9NQV7 894 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 ABCD2Q9UBJ2 740 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 DNAJB9Q9UBS3 223 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 ASB4Q9Y574 426 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 PCDHGB2Q9Y5G2 931 aa6.97□□□□□ -1.29
BDNF-209ENST00000420794 PRR19A6NJB7 356 aa6.96□□□□□ -1.29
BDNF-209ENST00000420794 UGT2B17O75795 530 aa6.96□□□□□ -1.29
BDNF-209ENST00000420794 MT-ND1P03886 318 aa6.96□□□□□ -1.29
BDNF-209ENST00000420794 GPX2P18283 190 aa6.96□□□□□ -1.29
BDNF-209ENST00000420794 CD247P20963 164 aa6.96□□□□□ -1.29
BDNF-209ENST00000420794 PCGF2P35227 344 aa6.96□□□□□ -1.29
BDNF-209ENST00000420794 EMP3P54852 163 aa6.96□□□□□ -1.29
BDNF-209ENST00000420794 TAS2R41P59536 307 aa6.96□□□□□ -1.29
BDNF-209ENST00000420794 MS4A2Q01362 244 aa6.96□□□□□ -1.29
BDNF-209ENST00000420794 BNC1Q01954 994 aa6.96□□□□□ -1.29
BDNF-209ENST00000420794 ALDH6A1Q02252 535 aaKnown RBP6.96□□□□□ -1.29
BDNF-209ENST00000420794 IL11RAQ14626 422 aa6.96□□□□□ -1.29
BDNF-209ENST00000420794 INAQ16352 499 aa6.96□□□□□ -1.29
BDNF-209ENST00000420794 PIK3C3Q8NEB9 887 aa6.96□□□□□ -1.29
BDNF-209ENST00000420794 OR5L2Q8NGL0 311 aa6.96□□□□□ -1.29
BDNF-209ENST00000420794 SUN3Q8TAQ9 357 aa6.96□□□□□ -1.29
BDNF-209ENST00000420794 NUDT8Q8WV74 236 aa6.96□□□□□ -1.29
BDNF-209ENST00000420794 LRTOMTQ8WZ04 291 aa6.96□□□□□ -1.29
BDNF-209ENST00000420794 UTP4Q969X6 686 aaKnown RBP6.96□□□□□ -1.29
BDNF-209ENST00000420794 NEURL3Q96EH8 262 aa6.96□□□□□ -1.29
BDNF-209ENST00000420794 ZNF184Q99676 751 aaPredicted RBP6.96□□□□□ -1.29
BDNF-209ENST00000420794 ZNF768Q9H5H4 540 aaKnown RBP6.96□□□□□ -1.29
BDNF-209ENST00000420794 CXorf36Q9H7Y0 433 aa6.96□□□□□ -1.29
BDNF-209ENST00000420794 TMEM27Q9HBJ8 222 aa6.96□□□□□ -1.29
BDNF-209ENST00000420794 C3orf18Q9UK00 162 aa6.96□□□□□ -1.29
BDNF-209ENST00000420794 TRIM64CA6NLI5 447 aa6.96□□□□□ -1.3
BDNF-209ENST00000420794 G3V2T6 193 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms