RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 KRT12Q99456 494 aa12.97□□□□□ -0.33
NFE4-201ENST00000420058 PIP5K1AQ99755 562 aa12.97□□□□□ -0.33
NFE4-201ENST00000420058 TUBA1CQ9BQE3 449 aa12.97□□□□□ -0.33
NFE4-201ENST00000420058 CXorf21Q9HAI6 301 aa12.97□□□□□ -0.33
NFE4-201ENST00000420058 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.97□□□□□ -0.33
NFE4-201ENST00000420058 TEX10Q9NXF1 929 aaPredicted RBP12.97□□□□□ -0.33
NFE4-201ENST00000420058 ADAM21Q9UKJ8 722 aa12.97□□□□□ -0.33
NFE4-201ENST00000420058 A0A0A6YYD5 115 aa12.96□□□□□ -0.33
NFE4-201ENST00000420058 A8MXE2 369 aa12.96□□□□□ -0.33
NFE4-201ENST00000420058 E7ESA3 106 aa12.96□□□□□ -0.33
NFE4-201ENST00000420058 TP53I11O14683 189 aa12.96□□□□□ -0.33
NFE4-201ENST00000420058 PGRMC2O15173 223 aa12.96□□□□□ -0.33
NFE4-201ENST00000420058 DYRK3O43781 588 aa12.96□□□□□ -0.33
NFE4-201ENST00000420058 RCBTB2O95199 551 aa12.96□□□□□ -0.33
NFE4-201ENST00000420058 ABCB1P08183 1280 aaPredicted RBP12.96□□□□□ -0.33
NFE4-201ENST00000420058 SLC35E2BP0CK96 405 aa12.96□□□□□ -0.33
NFE4-201ENST00000420058 SLC35E2P0CK97 266 aa12.96□□□□□ -0.33
NFE4-201ENST00000420058 PCNAP12004 261 aa12.96□□□□□ -0.33
NFE4-201ENST00000420058 S1PR1P21453 382 aa12.96□□□□□ -0.33
NFE4-201ENST00000420058 PCSK6P29122 969 aa12.96□□□□□ -0.33
NFE4-201ENST00000420058 BSGP35613 385 aa12.96□□□□□ -0.33
NFE4-201ENST00000420058 PTGDSP41222 190 aa12.96□□□□□ -0.33
NFE4-201ENST00000420058 LUZP2Q86TE4 346 aa12.96□□□□□ -0.33
NFE4-201ENST00000420058 TAGAPQ8N103 731 aa12.96□□□□□ -0.33
NFE4-201ENST00000420058 FBXO36Q8NEA4 188 aa12.96□□□□□ -0.33
NFE4-201ENST00000420058 FAM83FQ8NEG4 500 aaPredicted RBP12.96□□□□□ -0.33
NFE4-201ENST00000420058 ZNF592Q92610 1267 aa12.96□□□□□ -0.33
NFE4-201ENST00000420058 RGMAQ96B86 450 aa12.96□□□□□ -0.33
NFE4-201ENST00000420058 TMEM41AQ96HV5 264 aa12.96□□□□□ -0.33
NFE4-201ENST00000420058 CD274Q9NZQ7 290 aa12.96□□□□□ -0.33
NFE4-201ENST00000420058 FAM171A2A8MVW0 826 aa12.95□□□□□ -0.34
NFE4-201ENST00000420058 DEFB108AA8MXU0 73 aa12.95□□□□□ -0.34
NFE4-201ENST00000420058 GNB5O14775 395 aa12.95□□□□□ -0.34
NFE4-201ENST00000420058 ARHGEF9O43307 516 aa12.95□□□□□ -0.34
NFE4-201ENST00000420058 TLX1P31314 330 aaPredicted RBP12.95□□□□□ -0.34
NFE4-201ENST00000420058 ATP6V0D1P61421 351 aa12.95□□□□□ -0.34
NFE4-201ENST00000420058 DLG1Q12959 904 aa12.95□□□□□ -0.34
NFE4-201ENST00000420058 ZKSCAN8Q15776 578 aaPredicted RBP12.95□□□□□ -0.34
NFE4-201ENST00000420058 PRSS57Q6UWY2 283 aa12.95□□□□□ -0.34
NFE4-201ENST00000420058 LRRC70Q7Z2Q7 622 aa12.95□□□□□ -0.34
NFE4-201ENST00000420058 ISCA2Q86U28 154 aa12.95□□□□□ -0.34
NFE4-201ENST00000420058 PACS2Q86VP3 889 aa12.95□□□□□ -0.34
NFE4-201ENST00000420058 PRR22Q8IZ63 422 aa12.95□□□□□ -0.34
NFE4-201ENST00000420058 SPATA3Q8NHX4 192 aa12.95□□□□□ -0.34
NFE4-201ENST00000420058 PPP1R14CQ8TAE6 165 aa12.95□□□□□ -0.34
NFE4-201ENST00000420058 UBE2E3Q969T4 207 aa12.95□□□□□ -0.34
NFE4-201ENST00000420058 CTHRC1Q96CG8 243 aa12.95□□□□□ -0.34
NFE4-201ENST00000420058 Q96MF0 132 aa12.95□□□□□ -0.34
NFE4-201ENST00000420058 PELOQ9BRX2 385 aaKnown RBP12.95□□□□□ -0.34
NFE4-201ENST00000420058 SFXN3Q9BWM7 321 aa12.95□□□□□ -0.34
NFE4-201ENST00000420058 DDX31Q9H8H2 851 aaKnown RBP12.95□□□□□ -0.34
NFE4-201ENST00000420058 SNX15Q9NRS6 342 aa12.95□□□□□ -0.34
NFE4-201ENST00000420058 PHF11Q9UIL8 331 aa12.95□□□□□ -0.34
NFE4-201ENST00000420058 DTX4Q9Y2E6 619 aa12.95□□□□□ -0.34
NFE4-201ENST00000420058 TSC22D4Q9Y3Q8 395 aa12.95□□□□□ -0.34
NFE4-201ENST00000420058 TESMINQ9Y4I5 508 aa12.95□□□□□ -0.34
NFE4-201ENST00000420058 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.94□□□□□ -0.34
NFE4-201ENST00000420058 C2orf72A6NCS6 295 aa12.94□□□□□ -0.34
NFE4-201ENST00000420058 TRIM64A6NGJ6 449 aa12.94□□□□□ -0.34
NFE4-201ENST00000420058 TRIM64BA6NI03 449 aa12.94□□□□□ -0.34
NFE4-201ENST00000420058 CTIFO43310 598 aaKnown RBP12.94□□□□□ -0.34
NFE4-201ENST00000420058 OR10H2O60403 315 aa12.94□□□□□ -0.34
NFE4-201ENST00000420058 TNFSF13O75888 250 aa12.94□□□□□ -0.34
NFE4-201ENST00000420058 AIFM1O95831 613 aa12.94□□□□□ -0.34
NFE4-201ENST00000420058 ACTL6AO96019 429 aa12.94□□□□□ -0.34
NFE4-201ENST00000420058 MTHFD2P13995 350 aa12.94□□□□□ -0.34
NFE4-201ENST00000420058 ABCD3P28288 659 aa12.94□□□□□ -0.34
NFE4-201ENST00000420058 SERPINB1P30740 379 aa12.94□□□□□ -0.34
NFE4-201ENST00000420058 PIK3CBP42338 1070 aa12.94□□□□□ -0.34
NFE4-201ENST00000420058 ARFIP1P53367 373 aa12.94□□□□□ -0.34
NFE4-201ENST00000420058 ARL4CP56559 192 aa12.94□□□□□ -0.34
NFE4-201ENST00000420058 RPS13P62277 151 aaKnown RBP12.94□□□□□ -0.34
NFE4-201ENST00000420058 PDIA2Q13087 525 aaKnown RBP12.94□□□□□ -0.34
NFE4-201ENST00000420058 GRHL2Q6ISB3 625 aa12.94□□□□□ -0.34
NFE4-201ENST00000420058 CAPN12Q6ZSI9 719 aa12.94□□□□□ -0.34
NFE4-201ENST00000420058 WDSUB1Q8N9V3 476 aa12.94□□□□□ -0.34
NFE4-201ENST00000420058 WNT2BQ93097 391 aa12.94□□□□□ -0.34
NFE4-201ENST00000420058 HGDQ93099 445 aa12.94□□□□□ -0.34
NFE4-201ENST00000420058 INTS12Q96CB8 462 aaKnown RBP12.94□□□□□ -0.34
NFE4-201ENST00000420058 MARK4Q96L34 752 aa12.94□□□□□ -0.34
NFE4-201ENST00000420058 WFIKKN1Q96NZ8 548 aa12.94□□□□□ -0.34
NFE4-201ENST00000420058 NODALQ96S42 347 aa12.94□□□□□ -0.34
NFE4-201ENST00000420058 ATOH8Q96SQ7 321 aa12.94□□□□□ -0.34
NFE4-201ENST00000420058 MTERF1Q99551 399 aaKnown RBP12.94□□□□□ -0.34
NFE4-201ENST00000420058 GPR22Q99680 433 aa12.94□□□□□ -0.34
NFE4-201ENST00000420058 NXF5Q9H1B4 397 aaKnown RBP12.94□□□□□ -0.34
NFE4-201ENST00000420058 OR10A5Q9H207 317 aa12.94□□□□□ -0.34
NFE4-201ENST00000420058 C6orf203Q9P0P8 240 aaPredicted RBP12.94□□□□□ -0.34
NFE4-201ENST00000420058 CLCF1Q9UBD9 225 aa12.94□□□□□ -0.34
NFE4-201ENST00000420058 WIF1Q9Y5W5 379 aa12.94□□□□□ -0.34
NFE4-201ENST00000420058 PRR14LQ5THK1 2151 aa12.94□□□□□ -0.34
NFE4-201ENST00000420058 DSCAMO60469 2012 aa12.93□□□□□ -0.34
NFE4-201ENST00000420058 EXPH5Q8NEV8 1989 aa12.93□□□□□ -0.34
NFE4-201ENST00000420058 GOLGA6L10A0A0M3HER8 536 aa12.93□□□□□ -0.34
NFE4-201ENST00000420058 CAPN14A8MX76 684 aa12.93□□□□□ -0.34
NFE4-201ENST00000420058 INAFM1C9JVW0 142 aa12.93□□□□□ -0.34
NFE4-201ENST00000420058 CES2O00748 559 aa12.93□□□□□ -0.34
NFE4-201ENST00000420058 SMAD7O15105 426 aaKnown RBP12.93□□□□□ -0.34
NFE4-201ENST00000420058 ERN1O75460 977 aaKnown RBP12.93□□□□□ -0.34
NFE4-201ENST00000420058 SEC31AO94979 1220 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms