RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 ZNF583Q96ND8 569 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 DGAT2Q96PD7 388 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 OR6C1Q96RD1 312 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 CDC6Q99741 560 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 CHST8Q9H2A9 424 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 MAGIXQ9H6Y5 334 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 A4GALTQ9NPC4 353 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 MKKSQ9NPJ1 570 aaPredicted RBP5.6□□□□□ -1.51
HMGB3-202ENST00000419110 EQTNQ9NQ60 294 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 OLAHQ9NV23 265 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 ADPRHL2Q9NX46 363 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 SIDT1Q9NXL6 827 aaKnown RBP5.6□□□□□ -1.51
HMGB3-202ENST00000419110 CALML5Q9NZT1 146 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 TRPC4Q9UBN4 977 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 CES1P1Q9UKY3 287 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 AP4S1Q9Y587 144 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 GPR179Q6PRD1 2367 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 SEC16AO15027 2179 aa5.6□□□□□ -1.51
HMGB3-202ENST00000419110 VCANP13611 3396 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 A0A087WV62 115 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 TCRBV5S2A0A599 114 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 WASHC1A8K0Z3 465 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 EFCAB7A8K855 629 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 C9J4A7 227 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 H3BNX3 289 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 TMX2-CTNND1H3BSU7 103 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 CYR61O00622 381 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 NTN3O00634 580 aaPredicted RBP5.59□□□□□ -1.51
HMGB3-202ENST00000419110 PGRMC2O15173 223 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 HNRNPRO43390 633 aaKnown RBP5.59□□□□□ -1.51
HMGB3-202ENST00000419110 FOXS1O43638 330 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 SLC28A2O43868 658 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 MAN1A2O60476 641 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 TPST1O60507 370 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 PRAMEF2O60811 474 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 B4GALT2O60909 372 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 LDB3O75112 727 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 TNFRSF21O75509 655 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 CREG1O75629 220 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 SCRG1O75711 98 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 CDC123O75794 336 aaPredicted RBP5.59□□□□□ -1.51
HMGB3-202ENST00000419110 AK1P00568 194 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 LDLRP01130 860 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 CTSBP07858 339 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 RAP2AP10114 183 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 FOLR1P15328 257 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 FASP25445 335 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 PEX2P28328 305 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 AQP1P29972 269 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 CCKBRP32239 447 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 PTDSS1P48651 473 aaKnown RBP5.59□□□□□ -1.51
HMGB3-202ENST00000419110 XKP51811 444 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 CRISP3P54108 245 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 HSD17B7P56937 341 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 RAB15P59190 212 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 RPS26P62854 115 aaKnown RBP5.59□□□□□ -1.51
HMGB3-202ENST00000419110 IGLV3-21P80748 117 aaPredicted RBP5.59□□□□□ -1.51
HMGB3-202ENST00000419110 MAT1AQ00266 395 aaKnown RBP5.59□□□□□ -1.51
HMGB3-202ENST00000419110 CDK6Q00534 326 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 ID2Q02363 134 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 SPEM2Q0P670 501 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 LASP1Q14847 261 aaKnown RBP5.59□□□□□ -1.51
HMGB3-202ENST00000419110 ZNHIT3Q15649 155 aaPredicted RBP5.59□□□□□ -1.51
HMGB3-202ENST00000419110 LTB4RQ15722 352 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 CSRP2Q16527 193 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 PRSS53Q2L4Q9 553 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 MINDY4Q4G0A6 757 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 ZNF628Q5EBL2 1059 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 COX20Q5RI15 118 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 RHBDD2Q6NTF9 364 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 FAM111BQ6SJ93 734 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 QSOX2Q6ZRP7 698 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 ERMP1Q7Z2K6 904 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 C6orf120Q7Z4R8 191 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 ARHGAP22Q7Z5H3 698 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 PPP1R3BQ86XI6 285 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 PTOV1Q86YD1 416 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 SPPL2CQ8IUH8 684 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 CCDC116Q8IYX3 515 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 ST13P4Q8IZP2 240 aaPredicted RBP5.59□□□□□ -1.51
HMGB3-202ENST00000419110 LGI4Q8N135 537 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 CLEC4FQ8N1N0 589 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 METTL25Q8N6Q8 603 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 COX18Q8N8Q8 333 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 RCBTB1Q8NDN9 531 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 NUP43Q8NFH3 380 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 OR51Q1Q8NH59 317 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 NFKBIDQ8NI38 313 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 MIPOL1Q8TD10 442 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 RASSF5Q8WWW0 418 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 GEMIN6Q8WXD5 167 aaKnown RBP5.59□□□□□ -1.51
HMGB3-202ENST00000419110 COL26A1Q96A83 441 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 FKBP10Q96AY3 582 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 CLIP3Q96DZ5 547 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 MAGED4Q96JG8 741 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 HSH2DQ96JZ2 352 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 ART5Q96L15 291 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 ZNF681Q96N22 645 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 ZNF578Q96N58 590 aaPredicted RBP5.59□□□□□ -1.51
HMGB3-202ENST00000419110 ZNF607Q96SK3 696 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms