RNA–Protein interactions for RNA: ENST00000419074.5

RCC1-206, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-206ENST00000419074 CFAP54Q96N23 3096 aa12.4□□□□□ -0.42
RCC1-206ENST00000419074 SPEGQ15772 3267 aa12.4□□□□□ -0.43
RCC1-206ENST00000419074 SCN3AQ9NY46 2000 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 IGHV1-45A0A0A0MS14 117 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 A0A1W2PQ72 361 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 SAGE2PA6NJ88 616 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 UPK1AO00322 258 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 TLX3O43711 291 aaPredicted RBP12.39□□□□□ -0.43
RCC1-206ENST00000419074 HNRNPCL1O60812 293 aaKnown RBP12.39□□□□□ -0.43
RCC1-206ENST00000419074 KRT75O95678 551 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 DDAH2O95865 285 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 HOXB9P17482 250 aaPredicted RBP12.39□□□□□ -0.43
RCC1-206ENST00000419074 SOAT1P35610 550 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 PRKAG1P54619 331 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 MRPS35P82673 323 aaKnown RBP12.39□□□□□ -0.43
RCC1-206ENST00000419074 MXRA7P84157 204 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 PRR5P85299 388 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 EEF1A2Q05639 463 aaKnown RBP12.39□□□□□ -0.43
RCC1-206ENST00000419074 PCOLCEQ15113 449 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 GTDC1Q4AE62 458 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 RUNDC3AQ59EK9 446 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 FHL5Q5TD97 284 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 BHLHB9Q6PI77 547 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 PAPD4Q6PIY7 484 aaKnown RBP12.39□□□□□ -0.43
RCC1-206ENST00000419074 DNAJC14Q6Y2X3 702 aaPredicted RBP12.39□□□□□ -0.43
RCC1-206ENST00000419074 NDUFAF7Q7L592 441 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 C6orf120Q7Z4R8 191 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 VASH2Q86V25 355 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 MSRB3Q8IXL7 192 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 NFAM1Q8NET5 270 aaPredicted RBP12.39□□□□□ -0.43
RCC1-206ENST00000419074 NUP43Q8NFH3 380 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 OR7G1Q8NGA0 311 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 OR11G2Q8NGC1 345 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 OR56A1Q8NGH5 318 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 SNIP1Q8TAD8 396 aaKnown RBP12.39□□□□□ -0.43
RCC1-206ENST00000419074 SFXN5Q8TD22 340 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 ZFP90Q8TF47 636 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 FAM120BQ96EK7 910 aaKnown RBP12.39□□□□□ -0.43
RCC1-206ENST00000419074 NAF1Q96HR8 494 aaKnown RBP12.39□□□□□ -0.43
RCC1-206ENST00000419074 FBXL20Q96IG2 436 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 ART5Q96L15 291 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 IP6K3Q96PC2 410 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 SH3GL1Q99961 368 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 SLC35A5Q9BS91 424 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 CNPPD1Q9BV87 410 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 OR8D2Q9GZM6 311 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 SLC6A13Q9NSD5 602 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 ZCCHC3Q9NUD5 404 aaKnown RBP12.39□□□□□ -0.43
RCC1-206ENST00000419074 DDX18Q9NVP1 670 aaKnown RBP12.39□□□□□ -0.43
RCC1-206ENST00000419074 SLC25A37Q9NYZ2 338 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 VAPAQ9P0L0 249 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 PPIEQ9UNP9 301 aaKnown RBP12.39□□□□□ -0.43
RCC1-206ENST00000419074 ERVK-19Q9WJR5 959 aa12.39□□□□□ -0.43
RCC1-206ENST00000419074 SEC16AO15027 2179 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 TRBV5-3A0A0A0MS03 114 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 RNF103-CHMP3A0A140T963 221 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 FXYD1O00168 92 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 HRKO00198 91 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 CLIC1O00299 241 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 PEX12O00623 359 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 SEC24DO94855 1032 aaPredicted RBP12.38□□□□□ -0.43
RCC1-206ENST00000419074 UNC5CO95185 931 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 CBX7O95931 251 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 IGKV3-11P04433 115 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 CHI3L1P36222 383 aaPredicted RBP12.38□□□□□ -0.43
RCC1-206ENST00000419074 RASSF2P50749 326 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 GPR143P51810 404 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 GAB1Q13480 694 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 IL10RAQ13651 578 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 CAPRIN1Q14444 709 aaKnown RBP12.38□□□□□ -0.43
RCC1-206ENST00000419074 NANOGP8Q6NSW7 305 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 C8orf82Q6P1X6 216 aaPredicted RBP12.38□□□□□ -0.43
RCC1-206ENST00000419074 C16orf89Q6UX73 402 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 RINLQ6ZS11 566 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 CLEC4FQ8N1N0 589 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 RBM15BQ8NDT2 890 aaKnown RBP12.38□□□□□ -0.43
RCC1-206ENST00000419074 B3GNT7Q8NFL0 401 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 OR52R1Q8NGF1 315 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 OR1N1Q8NGS0 311 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 OR5AK3PQ8NH89 298 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 SLC2A12Q8TD20 617 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 ADAMTS17Q8TE56 1095 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 ZNF721Q8TF20 911 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 GATA6Q92908 595 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 NEURL3Q96EH8 262 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 IMMP1LQ96LU5 166 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 ANKRD27Q96NW4 1050 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 GPATCH1Q9BRR8 931 aaKnown RBP12.38□□□□□ -0.43
RCC1-206ENST00000419074 OR10A5Q9H207 317 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 C1orf21Q9H246 121 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 EPS8L2Q9H6S3 715 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 NANOGQ9H9S0 305 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 TPT1P8Q9HAU6 139 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 P4HTMQ9NXG6 502 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 NDE1Q9NXR1 346 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 TAS2R1Q9NYW7 299 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.38□□□□□ -0.43
RCC1-206ENST00000419074 BCAP29Q9UHQ4 241 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 GMEB1Q9Y692 573 aa12.38□□□□□ -0.43
RCC1-206ENST00000419074 NSG1A0A0A6YYJ2 146 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms