RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 TBCELQ5QJ74 424 aa12.98□□□□□ -0.33
LINC01006-202ENST00000418309 LIX1LQ8IVB5 337 aa12.98□□□□□ -0.33
LINC01006-202ENST00000418309 LRRC25Q8N386 305 aaPredicted RBP12.98□□□□□ -0.33
LINC01006-202ENST00000418309 MYRIPQ8NFW9 859 aa12.98□□□□□ -0.33
LINC01006-202ENST00000418309 ZNF597Q96LX8 424 aa12.98□□□□□ -0.33
LINC01006-202ENST00000418309 PAFAH2Q99487 392 aa12.98□□□□□ -0.33
LINC01006-202ENST00000418309 TSPYL1Q9H0U9 437 aa12.98□□□□□ -0.33
LINC01006-202ENST00000418309 CDC42EP4Q9H3Q1 356 aaKnown RBP12.98□□□□□ -0.33
LINC01006-202ENST00000418309 SLC24A3Q9HC58 644 aa12.98□□□□□ -0.33
LINC01006-202ENST00000418309 ZBTB26Q9HCK0 441 aa12.98□□□□□ -0.33
LINC01006-202ENST00000418309 KCNN3Q9UGI6 736 aa12.98□□□□□ -0.33
LINC01006-202ENST00000418309 ADAM29Q9UKF5 820 aa12.98□□□□□ -0.33
LINC01006-202ENST00000418309 SLC12A4Q9UP95 1085 aa12.98□□□□□ -0.33
LINC01006-202ENST00000418309 TACC2O95359 2948 aa12.98□□□□□ -0.33
LINC01006-202ENST00000418309 CCDC168Q8NDH2 2452 aa12.98□□□□□ -0.33
LINC01006-202ENST00000418309 GUCY1B2O75343 617 aa12.97□□□□□ -0.33
LINC01006-202ENST00000418309 ZWINTO95229 277 aa12.97□□□□□ -0.33
LINC01006-202ENST00000418309 COL6A2P12110 1019 aa12.97□□□□□ -0.33
LINC01006-202ENST00000418309 CPMP14384 443 aa12.97□□□□□ -0.33
LINC01006-202ENST00000418309 HOXB1P14653 301 aaPredicted RBP12.97□□□□□ -0.33
LINC01006-202ENST00000418309 PORP16435 677 aaPredicted RBP12.97□□□□□ -0.33
LINC01006-202ENST00000418309 MAPK12P53778 367 aa12.97□□□□□ -0.33
LINC01006-202ENST00000418309 RPP38P78345 283 aaKnown RBP12.97□□□□□ -0.33
LINC01006-202ENST00000418309 FUT7Q11130 342 aa12.97□□□□□ -0.33
LINC01006-202ENST00000418309 TRAF3Q13114 568 aa12.97□□□□□ -0.33
LINC01006-202ENST00000418309 DUSP8Q13202 625 aa12.97□□□□□ -0.33
LINC01006-202ENST00000418309 SLC25A35Q3KQZ1 300 aa12.97□□□□□ -0.33
LINC01006-202ENST00000418309 TEX35Q5T0J7 233 aa12.97□□□□□ -0.33
LINC01006-202ENST00000418309 C10orf62Q5T681 223 aaPredicted RBP12.97□□□□□ -0.33
LINC01006-202ENST00000418309 RIPPLY2Q5TAB7 128 aa12.97□□□□□ -0.33
LINC01006-202ENST00000418309 BICRALQ6AI39 1079 aa12.97□□□□□ -0.33
LINC01006-202ENST00000418309 RPS27LQ71UM5 84 aaKnown RBP12.97□□□□□ -0.33
LINC01006-202ENST00000418309 PACS2Q86VP3 889 aa12.97□□□□□ -0.33
LINC01006-202ENST00000418309 RELL1Q8IUW5 271 aa12.97□□□□□ -0.33
LINC01006-202ENST00000418309 PRR22Q8IZ63 422 aa12.97□□□□□ -0.33
LINC01006-202ENST00000418309 ZNF441Q8N8Z8 693 aa12.97□□□□□ -0.33
LINC01006-202ENST00000418309 OR4F6Q8NGB9 312 aa12.97□□□□□ -0.33
LINC01006-202ENST00000418309 UHMK1Q8TAS1 419 aaKnown RBP12.97□□□□□ -0.33
LINC01006-202ENST00000418309 ZNF592Q92610 1267 aa12.97□□□□□ -0.33
LINC01006-202ENST00000418309 C16orf45Q96MC5 204 aaPredicted RBP12.97□□□□□ -0.33
LINC01006-202ENST00000418309 RILPQ96NA2 401 aa12.97□□□□□ -0.33
LINC01006-202ENST00000418309 FMO2Q99518 471 aa12.97□□□□□ -0.33
LINC01006-202ENST00000418309 MRPL57Q9BQC6 102 aaKnown RBP12.97□□□□□ -0.33
LINC01006-202ENST00000418309 BRINP2Q9C0B6 783 aa12.97□□□□□ -0.33
LINC01006-202ENST00000418309 ARHGAP21Q5T5U3 1957 aa12.97□□□□□ -0.33
LINC01006-202ENST00000418309 F8P00451 2351 aa12.96□□□□□ -0.33
LINC01006-202ENST00000418309 ANKRD33BA6NCL7 494 aa12.96□□□□□ -0.33
LINC01006-202ENST00000418309 GOLGA6L10A6NI86 522 aa12.96□□□□□ -0.33
LINC01006-202ENST00000418309 HSPB2A8KAH6 182 aa12.96□□□□□ -0.33
LINC01006-202ENST00000418309 TRIM49D1C9J1S8 452 aa12.96□□□□□ -0.33
LINC01006-202ENST00000418309 TRIM3O75382 744 aaPredicted RBP12.96□□□□□ -0.33
LINC01006-202ENST00000418309 ERAL1O75616 437 aaKnown RBP12.96□□□□□ -0.33
LINC01006-202ENST00000418309 SNX4O95219 450 aa12.96□□□□□ -0.33
LINC01006-202ENST00000418309 OTCP00480 354 aa12.96□□□□□ -0.33
LINC01006-202ENST00000418309 PDYNP01213 254 aa12.96□□□□□ -0.33
LINC01006-202ENST00000418309 TSPAN8P19075 237 aa12.96□□□□□ -0.33
LINC01006-202ENST00000418309 MAGEA12P43365 314 aa12.96□□□□□ -0.33
LINC01006-202ENST00000418309 CDH13P55290 713 aa12.96□□□□□ -0.33
LINC01006-202ENST00000418309 HSPB2Q16082 182 aa12.96□□□□□ -0.33
LINC01006-202ENST00000418309 WHAMMP3Q1A5X7 153 aa12.96□□□□□ -0.33
LINC01006-202ENST00000418309 COMMD6Q7Z4G1 85 aa12.96□□□□□ -0.33
LINC01006-202ENST00000418309 ULK2Q8IYT8 1036 aa12.96□□□□□ -0.33
LINC01006-202ENST00000418309 METTL4Q8N3J2 472 aa12.96□□□□□ -0.33
LINC01006-202ENST00000418309 ZNF615Q8N8J6 731 aa12.96□□□□□ -0.33
LINC01006-202ENST00000418309 OR7G1Q8NGA0 311 aa12.96□□□□□ -0.33
LINC01006-202ENST00000418309 SPPL2AQ8TCT8 520 aa12.96□□□□□ -0.33
LINC01006-202ENST00000418309 TRPC4APQ8TEL6 797 aa12.96□□□□□ -0.33
LINC01006-202ENST00000418309 SELENOMQ8WWX9 145 aa12.96□□□□□ -0.33
LINC01006-202ENST00000418309 ISL2Q96A47 359 aa12.96□□□□□ -0.33
LINC01006-202ENST00000418309 ADIPOR1Q96A54 375 aa12.96□□□□□ -0.33
LINC01006-202ENST00000418309 GNRHR2Q96P88 292 aa12.96□□□□□ -0.33
LINC01006-202ENST00000418309 FUT8Q9BYC5 575 aa12.96□□□□□ -0.33
LINC01006-202ENST00000418309 MRPL46Q9H2W6 279 aaKnown RBP12.96□□□□□ -0.33
LINC01006-202ENST00000418309 FARSBQ9NSD9 589 aaKnown RBP12.96□□□□□ -0.33
LINC01006-202ENST00000418309 NMRK1Q9NWW6 199 aa12.96□□□□□ -0.33
LINC01006-202ENST00000418309 BCAP29Q9UHQ4 241 aa12.96□□□□□ -0.33
LINC01006-202ENST00000418309 DMGDHQ9UI17 866 aaKnown RBP12.96□□□□□ -0.33
LINC01006-202ENST00000418309 SNX6Q9UNH7 406 aa12.96□□□□□ -0.33
LINC01006-202ENST00000418309 PCDHGB3Q9Y5G1 929 aa12.96□□□□□ -0.33
LINC01006-202ENST00000418309 ANKRD17O75179 2603 aaKnown RBP12.95□□□□□ -0.34
LINC01006-202ENST00000418309 C1orf226A1L170 272 aa12.95□□□□□ -0.34
LINC01006-202ENST00000418309 AHRRA9YTQ3 701 aa12.95□□□□□ -0.34
LINC01006-202ENST00000418309 CNTFP26441 200 aa12.95□□□□□ -0.34
LINC01006-202ENST00000418309 FEN1P39748 380 aaKnown RBP12.95□□□□□ -0.34
LINC01006-202ENST00000418309 ALDH9A1P49189 494 aa12.95□□□□□ -0.34
LINC01006-202ENST00000418309 DLX5P56178 289 aa12.95□□□□□ -0.34
LINC01006-202ENST00000418309 SNTB1Q13884 538 aaKnown RBP12.95□□□□□ -0.34
LINC01006-202ENST00000418309 GGTA1PQ4G0N0 100 aa12.95□□□□□ -0.34
LINC01006-202ENST00000418309 ARSKQ6UWY0 536 aa12.95□□□□□ -0.34
LINC01006-202ENST00000418309 VWA5B2Q8N398 1253 aa12.95□□□□□ -0.34
LINC01006-202ENST00000418309 MMGT1Q8N4V1 131 aa12.95□□□□□ -0.34
LINC01006-202ENST00000418309 SECISBP2Q96T21 854 aaKnown RBP12.95□□□□□ -0.34
LINC01006-202ENST00000418309 ANGPTL4Q9BY76 406 aa12.95□□□□□ -0.34
LINC01006-202ENST00000418309 PSME2Q9UL46 239 aa12.95□□□□□ -0.34
LINC01006-202ENST00000418309 CAMK2AQ9UQM7 478 aa12.95□□□□□ -0.34
LINC01006-202ENST00000418309 CFL2Q9Y281 166 aa12.95□□□□□ -0.34
LINC01006-202ENST00000418309 SLC6A5Q9Y345 797 aa12.95□□□□□ -0.34
LINC01006-202ENST00000418309 PCDHA9Q9Y5H5 950 aa12.95□□□□□ -0.34
LINC01006-202ENST00000418309 A0A087WUV0 522 aaPredicted RBP12.94□□□□□ -0.34
LINC01006-202ENST00000418309 A0A1B0GTL3 188 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms