RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 SPPL3Q8TCT6 385 aa11.06□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 GLIPR2Q9H4G4 154 aa11.06□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 MRPS30Q9NP92 439 aaKnown RBP11.06□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 QPCTLQ9NXS2 382 aa11.06□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 REV1Q9UBZ9 1251 aa11.06□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 A0A1W2PRQ8 180 aa11.06□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 TMCC2O75069 709 aa11.06□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 WASP42768 502 aa11.06□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 RAB28P51157 221 aa11.06□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 TAS2R38P59533 333 aa11.06□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 COPZ1P61923 177 aa11.06□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 MLLT11Q13015 90 aaPredicted RBP11.06□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 SLAMF1Q13291 335 aa11.06□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 SGCGQ13326 291 aa11.06□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 ATAT1Q5SQI0 421 aa11.06□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 GDPD3Q7L5L3 318 aa11.06□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 C16orf62Q7Z3J2 963 aa11.06□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 SUN3Q8TAQ9 357 aa11.06□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 OTULINQ96BN8 352 aa11.06□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 AMDHD1Q96NU7 426 aa11.06□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 CAMK1GQ96NX5 476 aa11.06□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 TRMT61BQ9BVS5 477 aaKnown RBP11.06□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 SIRT3Q9NTG7 399 aaPredicted RBP11.06□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 KCNK6Q9Y257 313 aa11.06□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 CACNB4O00305 520 aaPredicted RBP11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 WWP2O00308 870 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 SLC30A4O14863 429 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 KCNK2O95069 426 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 PTGER1P34995 402 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 TRA2BP62995 288 aaKnown RBP11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 PRDX1Q06830 199 aaKnown RBP11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 SCN1BQ07699 218 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 PDGFRLQ15198 375 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 TMEM35AQ53FP2 167 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 ZNF544Q6NX49 715 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 NUDT18Q6ZVK8 323 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 CCDC190Q86UF4 302 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 C12orf76Q8N812 135 aaPredicted RBP11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 SLC9A6Q92581 669 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 DIRAS2Q96HU8 199 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 LGR4Q9BXB1 951 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 SLC25A19Q9HC21 320 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 MOV10Q9HCE1 1003 aaKnown RBP11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 LATO43561 262 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 APOL3O95236 402 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 HMGN2P05204 90 aaKnown RBP11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 CCNYL3P0C7X3 344 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 C8orf89P0DMQ9 161 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 ACADMP11310 421 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 HTRA4P83105 476 aaPredicted RBP11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 TGM3Q08188 693 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 TAB1Q15750 504 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 OCLNQ16625 522 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 ZNF311Q5JNZ3 666 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 C12orf73Q69YU5 71 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 SLC27A4Q6P1M0 643 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 GJD3Q8N144 294 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 CAMKK1Q8N5S9 505 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 NANOGP1Q8N7R0 232 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 OR8K5Q8NH50 307 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 GPR151Q8TDV0 419 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 KCTD7Q96MP8 289 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 RAB11FIP5Q9BXF6 653 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 ZNF717Q9BY31 904 aaPredicted RBP11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 POLDIP3Q9BY77 421 aaKnown RBP11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 MVB12BQ9H7P6 319 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 NT5DC2Q9H857 520 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 DDX31Q9H8H2 851 aaKnown RBP11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 H2AFY2Q9P0M6 372 aaPredicted RBP11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 ZNF221Q9UK13 617 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 PCYT1BQ9Y5K3 369 aaPredicted RBP11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 DNMT3AQ9Y6K1 912 aaPredicted RBP11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 DSPPQ9NZW4 1301 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 KIAA0100Q14667 2235 aaKnown RBP11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 ZNF670-ZNF695F2Z2N8 137 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 TFECO14948 347 aaPredicted RBP11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 PRKYO43930 277 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 PAK4O96013 591 aaPredicted RBP11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 CSNK2A2P19784 350 aaPredicted RBP11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 MMP11P24347 488 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 MPIP34949 423 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 CSNK1G2P78368 415 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 WSCD2Q2TBF2 565 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 CRTC2Q53ET0 693 aaPredicted RBP11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 UTS2BQ765I0 119 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 OLIG3Q7RTU3 272 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 RAB43Q86YS6 212 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 SRFBP1Q8NEF9 429 aaKnown RBP11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 OR56A1Q8NGH5 318 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 OR6T1Q8NGN1 323 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 AP3S1Q92572 193 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 KLK6Q92876 244 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 TMEM245Q9H330 911 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 POU2F3Q9UKI9 436 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 CMAHPQ9Y471 501 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 GPSM3Q9Y4H4 160 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 ZNF780BQ9Y6R6 833 aa11.05□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 FABP12A6NFH5 140 aa11.04□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 LCMT2O60294 686 aaKnown RBP11.04□□□□□ -0.64
CSPG4P3Y-201ENST00000418188 RECKO95980 971 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms