RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 ZBTB2Q8N680 514 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 BVESQ8NE79 360 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 OR5T2Q8NGG2 359 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 RAET1EQ8TD07 263 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 SECISBP2Q96T21 854 aaKnown RBP7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 ARHGAP9Q9BRR9 750 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 POLDIP3Q9BY77 421 aaKnown RBP7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 TMEM38AQ9H6F2 299 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 ZNF624Q9P2J8 865 aaPredicted RBP7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 PFDN2Q9UHV9 154 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 TDRD15B5MCY1 1934 aaKnown RBP7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 PRSS44E7EML9 344 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 LGALS8O00214 317 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 ZNF254O75437 659 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 LPLP06858 475 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 DRD2P14416 443 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 UGT2B7P16662 529 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 CR2P20023 1033 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 RBMS1P29558 406 aaKnown RBP7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 GJA5P36382 358 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 RFX3P48380 749 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 MAPKAPK2P49137 400 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 SMSP52788 366 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 CASP9P55211 416 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 EEF1A2Q05639 463 aaKnown RBP7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 MAP4K2Q12851 820 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 PTPRRQ15256 657 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 TIGD5Q53EQ6 642 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 ANXA8L1Q5VT79 327 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 FAM198BQ6UWH4 519 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 LRRC70Q7Z2Q7 622 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 PRICKLE2Q7Z3G6 844 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 CAMKMTQ7Z624 323 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 LRRTM3Q86VH5 581 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 MARCH9Q86YJ5 346 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 RNF175Q8N4F7 328 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 DBF4BQ8NFT6 615 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 ZNF582Q96NG8 517 aaPredicted RBP7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 ADGRE3Q9BY15 652 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 OSGEPL1Q9H4B0 414 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 FGF20Q9NP95 211 aaPredicted RBP7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 SLC35C2Q9NQQ7 365 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 MRPS18AQ9NVS2 196 aaKnown RBP7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 TVP23BQ9NYZ1 205 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 ING1Q9UK53 422 aaPredicted RBP7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 TRBC2A0A5B9 178 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 HNRNPCL2B2RXH8 293 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 EEF1E1O43324 174 aaKnown RBP7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 RGS11O94810 467 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 HLA-DPB1P04440 258 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 HOXD9P28356 352 aaPredicted RBP7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 TSPAN5P62079 268 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 SEC23BQ15437 767 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 SLC36A2Q495M3 483 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 GPRC6AQ5T6X5 926 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 MFSD14CQ5VZR4 134 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 TAPT1Q6NXT6 567 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 ATRAIDQ6UW56 229 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 SEZ6L2Q6UXD5 910 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 ZNF852Q6ZMS4 543 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 NLRC3Q7RTR2 1065 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 HSD17B13Q7Z5P4 300 aaPredicted RBP7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 GPC2Q8N158 579 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 ZFP41Q8N8Y5 198 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 HJURPQ8NCD3 748 aaPredicted RBP7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 ZNF485Q8NCK3 441 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 ADAMTS19Q8TE59 1207 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 LRR1Q96L50 414 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 CINPQ9BW66 212 aaPredicted RBP7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 BOCQ9BWV1 1114 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 POLR2J3Q9H1A7 115 aaKnown RBP7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 METTL17Q9H7H0 456 aaPredicted RBP7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 CBLCQ9ULV8 474 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 RUVBL1Q9Y265 456 aaKnown RBP7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 AIPO00170 330 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 GABRPO00591 440 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 PDCD5O14737 125 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 SSNA1O43805 119 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 SELENOFO60613 162 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 GIFP27352 417 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 PITPNBP48739 271 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 SRP9P49458 86 aaKnown RBP7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 LIM2P55344 173 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 PCBP3P57721 371 aaKnown RBP7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 CDK6Q00534 326 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 DHODHQ02127 395 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 RAB40BQ12829 278 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 ZXDCQ2QGD7 858 aaPredicted RBP7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 GPR33Q49SQ1 333 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 CDKL4Q5MAI5 379 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 OAFQ86UD1 273 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 EIF4E3Q8N5X7 224 aaKnown RBP7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 CLDN19Q8N6F1 224 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 CELF5Q8N6W0 485 aaKnown RBP7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 BEST4Q8NFU0 473 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 OR8K3Q8NH51 312 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 YIPF5Q969M3 257 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 DPH7Q9BTV6 452 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 POLMQ9NP87 494 aaPredicted RBP7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 SEMA3GQ9NS98 782 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms