RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 DLEU7Q6UYE1 221 aa7.52□□□□□ -1.21
MDC1-203ENST00000417033 CPEB2Q7Z5Q1 589 aaKnown RBP7.52□□□□□ -1.21
MDC1-203ENST00000417033 WDR53Q7Z5U6 358 aaPredicted RBP7.52□□□□□ -1.21
MDC1-203ENST00000417033 GALNT12Q8IXK2 581 aa7.52□□□□□ -1.21
MDC1-203ENST00000417033 ST13P4Q8IZP2 240 aaPredicted RBP7.52□□□□□ -1.21
MDC1-203ENST00000417033 C10orf111Q8N326 155 aa7.52□□□□□ -1.21
MDC1-203ENST00000417033 KIF2BQ8N4N8 673 aa7.52□□□□□ -1.21
MDC1-203ENST00000417033 NFAM1Q8NET5 270 aaPredicted RBP7.52□□□□□ -1.21
MDC1-203ENST00000417033 OR11G2Q8NGC1 345 aa7.52□□□□□ -1.21
MDC1-203ENST00000417033 SNIP1Q8TAD8 396 aaKnown RBP7.52□□□□□ -1.21
MDC1-203ENST00000417033 FBXO30Q8TB52 745 aa7.52□□□□□ -1.21
MDC1-203ENST00000417033 PNPT1Q8TCS8 783 aaKnown RBP7.52□□□□□ -1.21
MDC1-203ENST00000417033 OR5P2Q8WZ92 322 aa7.52□□□□□ -1.21
MDC1-203ENST00000417033 ZBED6CLQ96FA7 236 aaPredicted RBP7.52□□□□□ -1.21
MDC1-203ENST00000417033 CCDC115Q96NT0 180 aa7.52□□□□□ -1.21
MDC1-203ENST00000417033 PRPF18Q99633 342 aaKnown RBP7.52□□□□□ -1.21
MDC1-203ENST00000417033 SLC25A23Q9BV35 468 aa7.52□□□□□ -1.21
MDC1-203ENST00000417033 CNPPD1Q9BV87 410 aa7.52□□□□□ -1.21
MDC1-203ENST00000417033 NUDT9Q9BW91 350 aa7.52□□□□□ -1.21
MDC1-203ENST00000417033 SERHL2Q9H4I8 314 aa7.52□□□□□ -1.21
MDC1-203ENST00000417033 IKZF5Q9H5V7 419 aa7.52□□□□□ -1.21
MDC1-203ENST00000417033 CCDC86Q9H6F5 360 aaKnown RBP7.52□□□□□ -1.21
MDC1-203ENST00000417033 CXorf21Q9HAI6 301 aa7.52□□□□□ -1.21
MDC1-203ENST00000417033 ADAP2Q9NPF8 381 aa7.52□□□□□ -1.21
MDC1-203ENST00000417033 SEMA3GQ9NS98 782 aa7.52□□□□□ -1.21
MDC1-203ENST00000417033 ACSS1Q9NUB1 689 aaPredicted RBP7.52□□□□□ -1.21
MDC1-203ENST00000417033 ATAD3AQ9NVI7 634 aa7.52□□□□□ -1.21
MDC1-203ENST00000417033 VAPAQ9P0L0 249 aa7.52□□□□□ -1.21
MDC1-203ENST00000417033 TAGLN3Q9UI15 199 aa7.52□□□□□ -1.21
MDC1-203ENST00000417033 BTNL2Q9UIR0 455 aa7.52□□□□□ -1.21
MDC1-203ENST00000417033 LEF1Q9UJU2 399 aaPredicted RBP7.52□□□□□ -1.21
MDC1-203ENST00000417033 ZNF223Q9UK11 482 aaPredicted RBP7.52□□□□□ -1.21
MDC1-203ENST00000417033 FBXL4Q9UKA2 621 aa7.52□□□□□ -1.21
MDC1-203ENST00000417033 PSME2Q9UL46 239 aa7.52□□□□□ -1.21
MDC1-203ENST00000417033 MAN2B2Q9Y2E5 1009 aa7.52□□□□□ -1.21
MDC1-203ENST00000417033 DTX4Q9Y2E6 619 aa7.52□□□□□ -1.21
MDC1-203ENST00000417033 PADI2Q9Y2J8 665 aa7.52□□□□□ -1.21
MDC1-203ENST00000417033 RAXQ9Y2V3 346 aa7.52□□□□□ -1.21
MDC1-203ENST00000417033 NDUFAF1Q9Y375 327 aa7.52□□□□□ -1.21
MDC1-203ENST00000417033 PCDHGA6Q9Y5G7 932 aa7.52□□□□□ -1.21
MDC1-203ENST00000417033 CACNA1BQ00975 2339 aa7.52□□□□□ -1.21
MDC1-203ENST00000417033 A0A096LPI6 279 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 TRBV5-3A0A0A0MS03 114 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 IGHV1-45A0A0A0MS14 117 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 RNF103-CHMP3A0A140T963 221 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 SAGE2PA6NJ88 616 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 TAF4O00268 1085 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 UPK1AO00322 258 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 RFXANKO14593 260 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 ANGPT2O15123 496 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 TNNI3P19429 210 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 PRDX6P30041 224 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 GPC1P35052 558 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 EIF2S3P41091 472 aaKnown RBP7.51□□□□□ -1.21
MDC1-203ENST00000417033 ST13P50502 369 aaKnown RBP7.51□□□□□ -1.21
MDC1-203ENST00000417033 NUDT2P50583 147 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 SLC26A5P58743 744 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 IRX1P78414 480 aaPredicted RBP7.51□□□□□ -1.21
MDC1-203ENST00000417033 GABPB1Q06547 395 aaPredicted RBP7.51□□□□□ -1.21
MDC1-203ENST00000417033 Q0VFX4 171 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 CHAF1BQ13112 559 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 NFYCQ13952 458 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 SSPNQ14714 243 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 KRT72Q14CN4 511 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 MAPRE2Q15555 327 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 ELAVL1Q15717 326 aaKnown RBP7.51□□□□□ -1.21
MDC1-203ENST00000417033 MAPKAPK3Q16644 382 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 ANXA8L1Q5VT79 327 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 C16orf47Q6ZP98 133 aaPredicted RBP7.51□□□□□ -1.21
MDC1-203ENST00000417033 RINLQ6ZS11 566 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 SZRD1Q7Z422 152 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 DHDDSQ86SQ9 333 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 SPACA3Q8IXA5 215 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 VWA5B2Q8N398 1253 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 OR52R1Q8NGF1 315 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 ZFP28Q8NHY6 868 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 RP9Q8TA86 221 aaKnown RBP7.51□□□□□ -1.21
MDC1-203ENST00000417033 SLC2A12Q8TD20 617 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 ZNF675Q8TD23 568 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 ZNF721Q8TF20 911 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 METTL21AQ8WXB1 218 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 RIT1Q92963 219 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 NCLNQ969V3 563 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 KIAA1143Q96AT1 154 aaPredicted RBP7.51□□□□□ -1.21
MDC1-203ENST00000417033 CTHRC1Q96CG8 243 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 ELP4Q96EB1 424 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 FAM120BQ96EK7 910 aaKnown RBP7.51□□□□□ -1.21
MDC1-203ENST00000417033 C16orf58Q96GQ5 468 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 ITCHQ96J02 903 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 PANX1Q96RD7 426 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 CPPED1Q9BRF8 314 aaPredicted RBP7.51□□□□□ -1.21
MDC1-203ENST00000417033 YIPF4Q9BSR8 244 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 GPR87Q9BY21 358 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 OR8D2Q9GZM6 311 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 EPS8L2Q9H6S3 715 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 LIN28AQ9H9Z2 209 aaKnown RBP7.51□□□□□ -1.21
MDC1-203ENST00000417033 ZNF160Q9HCG1 818 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 EQTNQ9NQ60 294 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 TMEM45AQ9NWC5 275 aa7.51□□□□□ -1.21
MDC1-203ENST00000417033 P4HTMQ9NXG6 502 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms