RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 FBXL4Q9UKA2 621 aa12.23□□□□□ -0.45
CNOT4-204ENST00000414802 MAN2B2Q9Y2E5 1009 aa12.23□□□□□ -0.45
CNOT4-204ENST00000414802 CLCA3PQ9Y6N3 262 aa12.23□□□□□ -0.45
CNOT4-204ENST00000414802 NINQ8N4C6 2090 aa12.23□□□□□ -0.45
CNOT4-204ENST00000414802 CACNA1GO43497 2377 aa12.23□□□□□ -0.45
CNOT4-204ENST00000414802 TNRC6AQ8NDV7 1962 aaKnown RBP12.23□□□□□ -0.45
CNOT4-204ENST00000414802 IGHV1-45A0A0A0MS14 117 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 RNF103-CHMP3A0A140T963 221 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 DYTNA2CJ06 578 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 BBIP1A8MTZ0 92 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 AIM2O14862 343 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 NKX2-8O15522 239 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 ANP32DO95626 131 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 DDAH2O95865 285 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 CBX7O95931 251 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 CAPNS1P04632 268 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 DUSP8Q13202 625 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 NFYCQ13952 458 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 CAPRIN1Q14444 709 aaKnown RBP12.22□□□□□ -0.45
CNOT4-204ENST00000414802 KRT72Q14CN4 511 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 SPRED3Q2MJR0 410 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 SPDYE7PQ495Y7 208 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 FHL5Q5TD97 284 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 UNQ6494/PRO21346Q6UXR6 183 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 ERMP1Q7Z2K6 904 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 MSRB3Q8IXL7 192 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 FBXO27Q8NI29 283 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 TSPEARQ8WU66 669 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 NCLNQ969V3 563 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 CMTM5Q96DZ9 223 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 ELP4Q96EB1 424 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 FAM120BQ96EK7 910 aaKnown RBP12.22□□□□□ -0.45
CNOT4-204ENST00000414802 AURKBQ96GD4 344 aaPredicted RBP12.22□□□□□ -0.45
CNOT4-204ENST00000414802 LPAR4Q99677 370 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 SLC39A3Q9BRY0 314 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 EFHD1Q9BUP0 239 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 TRIM8Q9BZR9 551 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 ZNF160Q9HCG1 818 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 NEUROD4Q9HD90 331 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 EQTNQ9NQ60 294 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 P4HTMQ9NXG6 502 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 MAP10Q9P2G4 905 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 PCDHGB4Q9UN71 923 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 RAXQ9Y2V3 346 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 CFAP47Q6ZTR5 3102 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 A0A096LPI6 279 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 CLPSP04118 112 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 HOXB9P17482 250 aaPredicted RBP12.22□□□□□ -0.45
CNOT4-204ENST00000414802 PTPN6P29350 595 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 NUDT2P50583 147 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 PRKAG1P54619 331 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 CASP9P55211 416 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 STX5Q13190 355 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 BIKQ13323 160 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 TP53BP2Q13625 1128 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 MLC1Q15049 377 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 C6orf89Q6UWU4 347 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 ZNF621Q6ZSS3 439 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 SPACA3Q8IXA5 215 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 NFAM1Q8NET5 270 aaPredicted RBP12.22□□□□□ -0.45
CNOT4-204ENST00000414802 OR52R1Q8NGF1 315 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 FBXO30Q8TB52 745 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 PNPT1Q8TCS8 783 aaKnown RBP12.22□□□□□ -0.45
CNOT4-204ENST00000414802 ZNF721Q8TF20 911 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 NUDT9Q9BW91 350 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 FAM117AQ9C073 453 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 ZNF700Q9H0M5 742 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 ZCCHC3Q9NUD5 404 aaKnown RBP12.22□□□□□ -0.45
CNOT4-204ENST00000414802 DDX18Q9NVP1 670 aaKnown RBP12.22□□□□□ -0.45
CNOT4-204ENST00000414802 BCAP29Q9UHQ4 241 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 VPS4AQ9UN37 437 aa12.22□□□□□ -0.45
CNOT4-204ENST00000414802 NSG1A0A0A6YYJ2 146 aa12.21□□□□□ -0.45
CNOT4-204ENST00000414802 SYNDIG1LA6NDD5 238 aa12.21□□□□□ -0.45
CNOT4-204ENST00000414802 FXYD1O00168 92 aa12.21□□□□□ -0.45
CNOT4-204ENST00000414802 UPK1AO00322 258 aa12.21□□□□□ -0.45
CNOT4-204ENST00000414802 EFSO43281 561 aa12.21□□□□□ -0.45
CNOT4-204ENST00000414802 KCNH1O95259 989 aa12.21□□□□□ -0.45
CNOT4-204ENST00000414802 T-ENOLP0DO92 83 aa12.21□□□□□ -0.45
CNOT4-204ENST00000414802 ESRRAP11474 423 aaPredicted RBP12.21□□□□□ -0.45
CNOT4-204ENST00000414802 S1PR1P21453 382 aa12.21□□□□□ -0.45
CNOT4-204ENST00000414802 GALNSP34059 522 aa12.21□□□□□ -0.45
CNOT4-204ENST00000414802 EIF2S3P41091 472 aaKnown RBP12.21□□□□□ -0.45
CNOT4-204ENST00000414802 SLC26A5P58743 744 aa12.21□□□□□ -0.45
CNOT4-204ENST00000414802 MAP4K2Q12851 820 aa12.21□□□□□ -0.45
CNOT4-204ENST00000414802 TRMT5Q32P41 509 aaKnown RBP12.21□□□□□ -0.45
CNOT4-204ENST00000414802 DLEU7Q6UYE1 221 aa12.21□□□□□ -0.45
CNOT4-204ENST00000414802 WDR53Q7Z5U6 358 aaPredicted RBP12.21□□□□□ -0.45
CNOT4-204ENST00000414802 KIF2BQ8N4N8 673 aa12.21□□□□□ -0.45
CNOT4-204ENST00000414802 DPP10Q8N608 796 aa12.21□□□□□ -0.45
CNOT4-204ENST00000414802 NUP43Q8NFH3 380 aa12.21□□□□□ -0.45
CNOT4-204ENST00000414802 GOT1L1Q8NHS2 421 aaPredicted RBP12.21□□□□□ -0.45
CNOT4-204ENST00000414802 PSMA8Q8TAA3 256 aa12.21□□□□□ -0.45
CNOT4-204ENST00000414802 ZCCHC14Q8WYQ9 949 aaKnown RBP12.21□□□□□ -0.45
CNOT4-204ENST00000414802 DAZLQ92904 295 aaKnown RBP12.21□□□□□ -0.45
CNOT4-204ENST00000414802 CTHRC1Q96CG8 243 aa12.21□□□□□ -0.45
CNOT4-204ENST00000414802 OTUB1Q96FW1 271 aaPredicted RBP12.21□□□□□ -0.45
CNOT4-204ENST00000414802 SENP5Q96HI0 755 aaPredicted RBP12.21□□□□□ -0.45
CNOT4-204ENST00000414802 FBXL20Q96IG2 436 aa12.21□□□□□ -0.45
CNOT4-204ENST00000414802 NSL1Q96IY1 281 aa12.21□□□□□ -0.45
CNOT4-204ENST00000414802 CCNL2Q96S94 520 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms