RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 SKAP2O75563 359 aaPredicted RBP13.62□□□□□ -0.23
CHD1-202ENST00000414220 P04436 131 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 PRPS2P11908 318 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 GNLYP22749 145 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 SSTR4P31391 388 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 SOX3P41225 446 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 ST13P50502 369 aaKnown RBP13.62□□□□□ -0.23
CHD1-202ENST00000414220 DCAF7P61962 342 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 PSPHP78330 225 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 SRSF11Q05519 484 aaKnown RBP13.62□□□□□ -0.23
CHD1-202ENST00000414220 EBPQ15125 230 aaKnown RBP13.62□□□□□ -0.23
CHD1-202ENST00000414220 ZNF750Q32MQ0 723 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 RFTN2Q52LD8 501 aaPredicted RBP13.62□□□□□ -0.23
CHD1-202ENST00000414220 FHL5Q5TD97 284 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 ZNF468Q5VIY5 522 aaPredicted RBP13.62□□□□□ -0.23
CHD1-202ENST00000414220 MMP21Q8N119 569 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 FNDC5Q8NAU1 212 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 GOLM1Q8NBJ4 401 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 C17orf47Q8NEP4 570 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 ZFP28Q8NHY6 868 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 ZNF675Q8TD23 568 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 DOK4Q8TEW6 326 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 NR4A3Q92570 626 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 PPCDCQ96CD2 204 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 MTERF3Q96E29 417 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 ZNF681Q96N22 645 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 PRPF18Q99633 342 aaKnown RBP13.62□□□□□ -0.23
CHD1-202ENST00000414220 WWTR1Q9GZV5 400 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 TUBB1Q9H4B7 451 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 SACM1LQ9NTJ5 587 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 THAP1Q9NVV9 213 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 MAPRE3Q9UPY8 281 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 CNTRLQ7Z7A1 2325 aa13.62□□□□□ -0.23
CHD1-202ENST00000414220 SLCO1B7G3V0H7 640 aa13.61□□□□□ -0.23
CHD1-202ENST00000414220 LYPLA1O75608 230 aaPredicted RBP13.61□□□□□ -0.23
CHD1-202ENST00000414220 HPCAL1P37235 193 aa13.61□□□□□ -0.23
CHD1-202ENST00000414220 NR0B1P51843 470 aaKnown RBP13.61□□□□□ -0.23
CHD1-202ENST00000414220 NCBP2P52298 156 aaKnown RBP eCLIP13.61□□□□□ -0.23
CHD1-202ENST00000414220 MPP2Q14168 576 aa13.61□□□□□ -0.23
CHD1-202ENST00000414220 CEBPEQ15744 281 aa13.61□□□□□ -0.23
CHD1-202ENST00000414220 SMU1Q2TAY7 513 aa13.61□□□□□ -0.23
CHD1-202ENST00000414220 KRTCAP3Q53RY4 240 aa13.61□□□□□ -0.23
CHD1-202ENST00000414220 SLC22A10Q63ZE4 541 aa13.61□□□□□ -0.23
CHD1-202ENST00000414220 C16orf47Q6ZP98 133 aaPredicted RBP13.61□□□□□ -0.23
CHD1-202ENST00000414220 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.61□□□□□ -0.23
CHD1-202ENST00000414220 NATD1Q8N6N6 113 aa13.61□□□□□ -0.23
CHD1-202ENST00000414220 ZNF781Q8N8C0 355 aa13.61□□□□□ -0.23
CHD1-202ENST00000414220 PSD4Q8NDX1 1056 aa13.61□□□□□ -0.23
CHD1-202ENST00000414220 ADCY4Q8NFM4 1077 aa13.61□□□□□ -0.23
CHD1-202ENST00000414220 OR2T11Q8NH01 316 aa13.61□□□□□ -0.23
CHD1-202ENST00000414220 FCRL1Q96LA6 429 aa13.61□□□□□ -0.23
CHD1-202ENST00000414220 ATP6V1G3Q96LB4 118 aa13.61□□□□□ -0.23
CHD1-202ENST00000414220 TSSK3Q96PN8 268 aa13.61□□□□□ -0.23
CHD1-202ENST00000414220 REEP4Q9H6H4 257 aa13.61□□□□□ -0.23
CHD1-202ENST00000414220 TAS2R9Q9NYW1 312 aa13.61□□□□□ -0.23
CHD1-202ENST00000414220 MAT2BQ9NZL9 334 aa13.61□□□□□ -0.23
CHD1-202ENST00000414220 SH3BP4Q9P0V3 963 aa13.61□□□□□ -0.23
CHD1-202ENST00000414220 SEC14L3Q9UDX4 400 aa13.61□□□□□ -0.23
CHD1-202ENST00000414220 NTNG1Q9Y2I2 539 aa13.61□□□□□ -0.23
CHD1-202ENST00000414220 PTGDR2Q9Y5Y4 395 aa13.61□□□□□ -0.23
CHD1-202ENST00000414220 CFAP46Q8IYW2 2715 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 ATP6AP2A0A1C7CYW4 349 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 A0A1W2PS29 197 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 ASPDHA6ND91 283 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 MYO1GB0I1T2 1018 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 ACOT7O00154 380 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 ITM2AO43736 263 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 PEX1O43933 1283 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 COQ9O75208 318 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 ATP6AP2O75787 350 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 OR6B1O95007 311 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 CBX6O95503 412 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 CT62P0C5K7 136 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 PCSK2P16519 638 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 ZNF24P17028 368 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 CNR1P21554 472 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 GPC1P35052 558 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 BST1Q10588 318 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 PDCD2Q16342 344 aaPredicted RBP13.6□□□□□ -0.23
CHD1-202ENST00000414220 ZNF628Q5EBL2 1059 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 XKR7Q5GH72 579 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 FAM180BQ6P0A1 224 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 PAOXQ6QHF9 649 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 FAM111BQ6SJ93 734 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 GK5Q6ZS86 529 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 SULF2Q8IWU5 870 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 ZNF615Q8N8J6 731 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 OR52R1Q8NGF1 315 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 OR9A2Q8NGT5 310 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 C16orf52Q8NHV5 167 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 PRR7Q8TB68 274 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.6□□□□□ -0.23
CHD1-202ENST00000414220 GFM2Q969S9 779 aaKnown RBP13.6□□□□□ -0.23
CHD1-202ENST00000414220 CTHRC1Q96CG8 243 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 SPACA9Q96E40 222 aaPredicted RBP13.6□□□□□ -0.23
CHD1-202ENST00000414220 HSPBAP1Q96EW2 488 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 ZBED6CLQ96FA7 236 aaPredicted RBP13.6□□□□□ -0.23
CHD1-202ENST00000414220 ZNF764Q96H86 408 aaPredicted RBP13.6□□□□□ -0.23
CHD1-202ENST00000414220 TAAR6Q96RI8 345 aa13.6□□□□□ -0.23
CHD1-202ENST00000414220 SLX1AQ9BQ83 275 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms