RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 ITGB7P26010 798 aa13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 OR3A3P47888 321 aa13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 WDR5P61964 334 aaKnown RBP13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 TMEM115Q12893 351 aaPredicted RBP13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 MLLT11Q13015 90 aaPredicted RBP13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 LCN1P1Q5VSP4 162 aa13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 TRMT11Q7Z4G4 463 aaKnown RBP13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 PROKR2Q8NFJ6 384 aa13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 BTN2A2Q8WVV5 523 aa13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 CCDC120Q96HB5 630 aa13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 WDFY2Q96P53 400 aa13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 TRIM45Q9H8W5 580 aaPredicted RBP13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 IL21Q9HBE4 155 aa13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 SEC14L3Q9UDX4 400 aa13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 STOML2Q9UJZ1 356 aa13.8□□□□□ -0.2
SEMA3F-202ENST00000413852 CTSAP10619 480 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 CELP19835 753 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 SNRPGP62308 76 aaKnown RBP13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 TOR1AIP1Q5JTV8 583 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 FAM27D1Q5T7N8 215 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 C6orf120Q7Z4R8 191 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 LRRTM4Q86VH4 590 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 TRAPPC5Q8IUR0 188 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 OR4K5Q8NGD3 323 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 GOT1L1Q8NHS2 421 aaPredicted RBP13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 MSLNLQ96KJ4 702 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 RIPOR3Q96MK2 946 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 ZNF717Q9BY31 904 aaPredicted RBP13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 TDP1Q9NUW8 608 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 KCND3Q9UK17 655 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 TRAV6A0A075B6T7 132 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 SERTM1A2A2V5 107 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 HMGN4O00479 90 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 C1orf105O95561 183 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 ADAP00813 363 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 ENPP1P22413 925 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 RPS5P46782 204 aaKnown RBP13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 SLC6A11P48066 632 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 SLC9A3P48764 834 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 GZMKP49863 264 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 MAPK12P53778 367 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 C21orf58P58505 322 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 TMEM215Q68D42 235 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 SIGIRRQ6IA17 410 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 GDPD4Q6W3E5 623 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 NPAS4Q8IUM7 802 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 OR8D4Q8NGM9 314 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 OR6T1Q8NGN1 323 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 OR8J1Q8NGP2 316 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 OR2A12Q8NGT7 310 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 ZFAND1Q8TCF1 268 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 ZG16BQ96DA0 208 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 OR2AG1Q9H205 316 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 BEX1Q9HBH7 125 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 ZDHHC4Q9NPG8 344 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 A4GNTQ9UNA3 340 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 RAB36O95755 333 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 CTSLP07711 333 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 PIPP12273 146 aaPredicted RBP13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 SRP9P49458 86 aaKnown RBP13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 CSTF1Q05048 431 aaKnown RBP13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 ZNF628Q5EBL2 1059 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 FAM205BPQ63HN1 556 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 ZNF730Q6ZMV8 503 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 MARCH9Q86YJ5 346 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 OR4M2Q8NGB6 313 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 OR6C4Q8NGE1 309 aa13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 TEX10Q9NXF1 929 aaPredicted RBP13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 SF3B6Q9Y3B4 125 aaKnown RBP13.79□□□□□ -0.2
SEMA3F-202ENST00000413852 RANBP2P49792 3224 aaKnown RBP13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 SYNDIG1LA6NDD5 238 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 FAM183AA6NL82 134 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 SLC16A5O15375 505 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 MPZL2O60487 215 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 UGDHO60701 494 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 EPPINO95925 133 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 TBX6O95947 436 aaPredicted RBP13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 C1GALT1C1LP0DN25 315 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 ENDOUP21128 410 aaKnown RBP13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 PTX3P26022 381 aaPredicted RBP13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 IFNA8P32881 189 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 BUD31P41223 144 aaPredicted RBP13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 GIPRP48546 466 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 NR2C2APQ86WQ0 139 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 SLC37A3Q8NCC5 494 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 DOK4Q8TEW6 326 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 PHF21AQ96BD5 680 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 QRFPRQ96P65 431 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 TREX2Q9BQ50 279 aaPredicted RBP13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 CUEDC1Q9NWM3 386 aaPredicted RBP13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 CIB4A0PJX0 185 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 ANTXRLA6NF34 631 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 FAM25AB3EWG3 89 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 FAM25CB3EWG5 89 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 FAM25GB3EWG6 89 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 PLPP1O14494 284 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 ZNF197O14709 1029 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 LYRM1O43325 122 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 IFNA14P01570 189 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 TFPIP10646 304 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms