RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 STK32CQ86UX6 486 aa16.12■□□□□ 0.17
PTPRC-206ENST00000413409 AMIGO1Q86WK6 493 aa16.12■□□□□ 0.17
PTPRC-206ENST00000413409 MFSD9Q8NBP5 474 aa16.12■□□□□ 0.17
PTPRC-206ENST00000413409 SSC4DQ8WTU2 575 aa16.12■□□□□ 0.17
PTPRC-206ENST00000413409 ZFPM2Q8WW38 1151 aa16.12■□□□□ 0.17
PTPRC-206ENST00000413409 DPH2Q9BQC3 489 aaPredicted RBP16.12■□□□□ 0.17
PTPRC-206ENST00000413409 SLC6A16Q9GZN6 736 aa16.12■□□□□ 0.17
PTPRC-206ENST00000413409 ADPRHL2Q9NX46 363 aa16.12■□□□□ 0.17
PTPRC-206ENST00000413409 TAS2R7Q9NYW3 318 aa16.12■□□□□ 0.17
PTPRC-206ENST00000413409 SNX7Q9UNH6 387 aa16.12■□□□□ 0.17
PTPRC-206ENST00000413409 FAF1Q9UNN5 650 aaPredicted RBP16.12■□□□□ 0.17
PTPRC-206ENST00000413409 LRIT2A6NDA9 550 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 RTCAO00442 366 aaKnown RBP16.11■□□□□ 0.17
PTPRC-206ENST00000413409 GNGT2O14610 69 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 HAT1O14929 419 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 LCMT2O60294 686 aaKnown RBP16.11■□□□□ 0.17
PTPRC-206ENST00000413409 CLPTM1O96005 669 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 FABP3P05413 133 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 ARAFP10398 606 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 F3P13726 295 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 DRD2P14416 443 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 CD82P27701 267 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 DCTP40126 519 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 ACTR1BP42025 376 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 SSR2P43308 183 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 ITGA1P56199 1179 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 ACTR1AP61163 376 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 TUBA4AP68366 448 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 MLC1Q15049 377 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 PRSS53Q2L4Q9 553 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 FHL5Q5TD97 284 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 RNF220Q5VTB9 566 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 FOXB2Q5VYV0 432 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 OR4C11Q6IEV9 310 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 IYDQ6PHW0 289 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 SHQ1Q6PI26 577 aaKnown RBP16.11■□□□□ 0.17
PTPRC-206ENST00000413409 CLEC4FQ8N1N0 589 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 ARL10Q8N8L6 244 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 SRFBP1Q8NEF9 429 aaKnown RBP16.11■□□□□ 0.17
PTPRC-206ENST00000413409 CYGBQ8WWM9 190 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 LCN9Q8WX39 176 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 PMEPA1Q969W9 287 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 SLC22A18Q96BI1 424 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 HSH2DQ96JZ2 352 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 FAIM2Q9BWQ8 316 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 YTHDF1Q9BYJ9 559 aaKnown RBP16.11■□□□□ 0.17
PTPRC-206ENST00000413409 NLNQ9BYT8 704 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 ACSS1Q9NUB1 689 aaPredicted RBP16.11■□□□□ 0.17
PTPRC-206ENST00000413409 GPATCH2Q9NW75 528 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 UTS2RQ9UKP6 389 aa16.11■□□□□ 0.17
PTPRC-206ENST00000413409 PRRC2CQ9Y520 2896 aaKnown RBP16.1■□□□□ 0.17
PTPRC-206ENST00000413409 TRIM64A6NGJ6 449 aa16.1■□□□□ 0.17
PTPRC-206ENST00000413409 NKX2-8O15522 239 aa16.1■□□□□ 0.17
PTPRC-206ENST00000413409 TMPRSS11DO60235 418 aa16.1■□□□□ 0.17
PTPRC-206ENST00000413409 E2F6O75461 281 aa16.1■□□□□ 0.17
PTPRC-206ENST00000413409 SNAP29O95721 258 aa16.1■□□□□ 0.17
PTPRC-206ENST00000413409 NUDT7P0C024 238 aa16.1■□□□□ 0.17
PTPRC-206ENST00000413409 CCL4P13236 92 aa16.1■□□□□ 0.17
PTPRC-206ENST00000413409 GNLYP22749 145 aa16.1■□□□□ 0.17
PTPRC-206ENST00000413409 AK4P27144 223 aaPredicted RBP16.1■□□□□ 0.17
PTPRC-206ENST00000413409 SOAT1P35610 550 aa16.1■□□□□ 0.17
PTPRC-206ENST00000413409 CHI3L1P36222 383 aaPredicted RBP16.1■□□□□ 0.17
PTPRC-206ENST00000413409 MAGEA8P43361 318 aa16.1■□□□□ 0.17
PTPRC-206ENST00000413409 EEF1A2Q05639 463 aaKnown RBP16.1■□□□□ 0.17
PTPRC-206ENST00000413409 KIR2DS3Q14952 304 aa16.1■□□□□ 0.17
PTPRC-206ENST00000413409 C16orf72Q14CZ0 275 aa16.1■□□□□ 0.17
PTPRC-206ENST00000413409 OTUD3Q5T2D3 398 aaPredicted RBP16.1■□□□□ 0.17
PTPRC-206ENST00000413409 OR2T5Q6IEZ7 315 aa16.1■□□□□ 0.17
PTPRC-206ENST00000413409 PAQR7Q86WK9 346 aa16.1■□□□□ 0.17
PTPRC-206ENST00000413409 SLITRK4Q8IW52 837 aa16.1■□□□□ 0.17
PTPRC-206ENST00000413409 NAGSQ8N159 534 aa16.1■□□□□ 0.17
PTPRC-206ENST00000413409 Q8N9G6 341 aaPredicted RBP16.1■□□□□ 0.17
PTPRC-206ENST00000413409 OR2T29Q8NH02 315 aa16.1■□□□□ 0.17
PTPRC-206ENST00000413409 PSMA8Q8TAA3 256 aa16.1■□□□□ 0.17
PTPRC-206ENST00000413409 NEURL3Q96EH8 262 aa16.1■□□□□ 0.17
PTPRC-206ENST00000413409 NRBF2Q96F24 287 aa16.1■□□□□ 0.17
PTPRC-206ENST00000413409 ZBED6CLQ96FA7 236 aaPredicted RBP16.1■□□□□ 0.17
PTPRC-206ENST00000413409 TEFMQ96QE5 360 aaKnown RBP16.1■□□□□ 0.17
PTPRC-206ENST00000413409 DPH7Q9BTV6 452 aa16.1■□□□□ 0.17
PTPRC-206ENST00000413409 AICDAQ9GZX7 198 aa16.1■□□□□ 0.17
PTPRC-206ENST00000413409 ZNF768Q9H5H4 540 aaKnown RBP16.1■□□□□ 0.17
PTPRC-206ENST00000413409 CLK4Q9HAZ1 481 aaKnown RBP16.1■□□□□ 0.17
PTPRC-206ENST00000413409 TUBA8Q9NY65 449 aaPredicted RBP16.1■□□□□ 0.17
PTPRC-206ENST00000413409 SPHK1Q9NYA1 384 aa16.1■□□□□ 0.17
PTPRC-206ENST00000413409 ZNF624Q9P2J8 865 aaPredicted RBP16.1■□□□□ 0.17
PTPRC-206ENST00000413409 ANGPT4Q9Y264 503 aa16.1■□□□□ 0.17
PTPRC-206ENST00000413409 TRIM64CA6NLI5 447 aa16.09■□□□□ 0.17
PTPRC-206ENST00000413409 STMND1H3BQB6 276 aa16.09■□□□□ 0.17
PTPRC-206ENST00000413409 K7EM74 188 aa16.09■□□□□ 0.17
PTPRC-206ENST00000413409 GUCY1B2O75343 617 aa16.09■□□□□ 0.17
PTPRC-206ENST00000413409 RASGRP1O95267 797 aa16.09■□□□□ 0.17
PTPRC-206ENST00000413409 FKBP9O95302 570 aa16.09■□□□□ 0.17
PTPRC-206ENST00000413409 EML2O95834 649 aa16.09■□□□□ 0.17
PTPRC-206ENST00000413409 TFAP2AP05549 437 aa16.09■□□□□ 0.17
PTPRC-206ENST00000413409 GNAO1P09471 354 aa16.09■□□□□ 0.17
PTPRC-206ENST00000413409 ETFAP13804 333 aa16.09■□□□□ 0.17
PTPRC-206ENST00000413409 ELAVL4P26378 380 aaKnown RBP16.09■□□□□ 0.17
PTPRC-206ENST00000413409 CRATP43155 626 aa16.09■□□□□ 0.17
PTPRC-206ENST00000413409 NR1H2P55055 460 aa16.09■□□□□ 0.17
PTPRC-206ENST00000413409 RPS15AP62244 130 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms