RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 UFD1Q92890 307 aa12.34□□□□□ -0.43
LITAF-203ENST00000413364 TBC1D20Q96BZ9 403 aa12.34□□□□□ -0.43
LITAF-203ENST00000413364 AHCYL2Q96HN2 611 aaKnown RBP12.34□□□□□ -0.43
LITAF-203ENST00000413364 MS4A8Q9BY19 250 aa12.34□□□□□ -0.43
LITAF-203ENST00000413364 DGCR6LQ9BY27 220 aa12.34□□□□□ -0.43
LITAF-203ENST00000413364 GHITMQ9H3K2 345 aa12.34□□□□□ -0.43
LITAF-203ENST00000413364 EPS8L2Q9H6S3 715 aa12.34□□□□□ -0.43
LITAF-203ENST00000413364 SMURF2Q9HAU4 748 aa12.34□□□□□ -0.43
LITAF-203ENST00000413364 IL1RAPQ9NPH3 570 aa12.34□□□□□ -0.43
LITAF-203ENST00000413364 SPASTQ9UBP0 616 aa12.34□□□□□ -0.43
LITAF-203ENST00000413364 KCNK6Q9Y257 313 aa12.34□□□□□ -0.43
LITAF-203ENST00000413364 MRPS7Q9Y2R9 242 aaKnown RBP12.34□□□□□ -0.43
LITAF-203ENST00000413364 NUMA1Q14980 2115 aa12.33□□□□□ -0.44
LITAF-203ENST00000413364 ANHXE9PGG2 379 aa12.33□□□□□ -0.44
LITAF-203ENST00000413364 PPM1BO75688 479 aa12.33□□□□□ -0.44
LITAF-203ENST00000413364 MED26O95402 600 aa12.33□□□□□ -0.44
LITAF-203ENST00000413364 KLF8O95600 359 aaPredicted RBP12.33□□□□□ -0.44
LITAF-203ENST00000413364 C6orf47O95873 294 aa12.33□□□□□ -0.44
LITAF-203ENST00000413364 TBX6O95947 436 aaPredicted RBP12.33□□□□□ -0.44
LITAF-203ENST00000413364 EGFP01133 1207 aa12.33□□□□□ -0.44
LITAF-203ENST00000413364 SEMG1P04279 462 aa12.33□□□□□ -0.44
LITAF-203ENST00000413364 IL3P08700 152 aa12.33□□□□□ -0.44
LITAF-203ENST00000413364 ZNF3P17036 446 aa12.33□□□□□ -0.44
LITAF-203ENST00000413364 COL9A1P20849 921 aa12.33□□□□□ -0.44
LITAF-203ENST00000413364 PCGF2P35227 344 aa12.33□□□□□ -0.44
LITAF-203ENST00000413364 EPS8Q12929 822 aa12.33□□□□□ -0.44
LITAF-203ENST00000413364 PLCL1Q15111 1095 aa12.33□□□□□ -0.44
LITAF-203ENST00000413364 MPEG1Q2M385 716 aa12.33□□□□□ -0.44
LITAF-203ENST00000413364 ZNF404Q494X3 552 aa12.33□□□□□ -0.44
LITAF-203ENST00000413364 TYW3Q6IPR3 259 aaKnown RBP12.33□□□□□ -0.44
LITAF-203ENST00000413364 TMEM179BQ7Z7N9 219 aa12.33□□□□□ -0.44
LITAF-203ENST00000413364 HIPK1Q86Z02 1210 aa12.33□□□□□ -0.44
LITAF-203ENST00000413364 HS3ST5Q8IZT8 346 aa12.33□□□□□ -0.44
LITAF-203ENST00000413364 LINC01555Q8NAE3 123 aa12.33□□□□□ -0.44
LITAF-203ENST00000413364 DNAJA4Q8WW22 397 aaPredicted RBP12.33□□□□□ -0.44
LITAF-203ENST00000413364 TMCO6Q96DC7 493 aa12.33□□□□□ -0.44
LITAF-203ENST00000413364 CAMK1GQ96NX5 476 aa12.33□□□□□ -0.44
LITAF-203ENST00000413364 APOOQ9BUR5 198 aa12.33□□□□□ -0.44
LITAF-203ENST00000413364 SORBS1Q9BX66 1292 aaKnown RBP12.33□□□□□ -0.44
LITAF-203ENST00000413364 TOR3AQ9H497 397 aa12.33□□□□□ -0.44
LITAF-203ENST00000413364 AP1M2Q9Y6Q5 423 aa12.33□□□□□ -0.44
LITAF-203ENST00000413364 TICRRQ7Z2Z1 1910 aa12.33□□□□□ -0.44
LITAF-203ENST00000413364 PLPP1O14494 284 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 SNAPINO95295 136 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 APOC1P02654 83 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 NUDT7P0C024 238 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 HOXB2P14652 356 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 CD83Q01151 205 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 KIAA1324Q6UXG2 1013 aaKnown RBP12.32□□□□□ -0.44
LITAF-203ENST00000413364 GALNT10Q86SR1 603 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 PLD3Q8IV08 490 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 NAGSQ8N159 534 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 C11orf65Q8NCR3 313 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 SLC7A6Q92536 515 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 MBOAT4Q96T53 435 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 ING3Q9NXR8 418 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 GLS2Q9UI32 602 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 OSGIN1Q9UJX0 560 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 TBC1D3DA0A087WVF3 549 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 TBC1D3IA0A087WXS9 549 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 TBC1D3EA0A087X179 549 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 TBC1D3KA0A087X1G2 549 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 TBC1D3FA6NER0 549 aaPredicted RBP12.32□□□□□ -0.44
LITAF-203ENST00000413364 TBC1D3LB9A6J9 549 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 F8W036 122 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 H7BY64 318 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 CACNB4O00305 520 aaPredicted RBP12.32□□□□□ -0.44
LITAF-203ENST00000413364 ST8SIA5O15466 376 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 LATO43561 262 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 TBC1D3HP0C7X1 549 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 ALOX12P18054 663 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 MAT2AP31153 395 aaKnown RBP12.32□□□□□ -0.44
LITAF-203ENST00000413364 RAB28P51157 221 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 MVDP53602 400 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 PRSS53Q2L4Q9 553 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 TMEM236Q5W0B7 351 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 TTC23Q5W5X9 447 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 TBC1D3GQ6DHY5 549 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 OR2T5Q6IEZ7 315 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 TBC1D3CQ6IPX1 549 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 SHQ1Q6PI26 577 aaKnown RBP12.32□□□□□ -0.44
LITAF-203ENST00000413364 P2RY8Q86VZ1 359 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 PHC2Q8IXK0 858 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 TBC1D3Q8IZP1 549 aaPredicted RBP12.32□□□□□ -0.44
LITAF-203ENST00000413364 OR52N2Q8NGI0 321 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 OR2T29Q8NH02 315 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 ASB12Q8WXK4 309 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 SLC9A6Q92581 669 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 PTP4A1Q93096 173 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 HSH2DQ96JZ2 352 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 MUS81Q96NY9 551 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 PRAP1Q96NZ9 151 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 F2RL3Q96RI0 385 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 SLC35A5Q9BS91 424 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 RAB11FIP5Q9BXF6 653 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 IMP3Q9NV31 184 aaKnown RBP12.32□□□□□ -0.44
LITAF-203ENST00000413364 VNN3Q9NY84 501 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 SCML1Q9UN30 329 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 ABCG2Q9UNQ0 655 aa12.32□□□□□ -0.44
LITAF-203ENST00000413364 PLEKHM1Q9Y4G2 1056 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms