RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 WDR53Q7Z5U6 358 aaPredicted RBP17.61■□□□□ 0.41
CPSF7-204ENST00000413232 TMEM200AQ86VY9 491 aa17.61■□□□□ 0.41
CPSF7-204ENST00000413232 MED12LQ86YW9 2145 aa17.61■□□□□ 0.41
CPSF7-204ENST00000413232 CLYBLQ8N0X4 340 aa17.61■□□□□ 0.41
CPSF7-204ENST00000413232 RELL2Q8NC24 303 aaPredicted RBP17.61■□□□□ 0.41
CPSF7-204ENST00000413232 SIMC1Q8NDZ2 872 aa17.61■□□□□ 0.41
CPSF7-204ENST00000413232 SPPL2AQ8TCT8 520 aa17.61■□□□□ 0.41
CPSF7-204ENST00000413232 ATP6V1E2Q96A05 226 aa17.61■□□□□ 0.41
CPSF7-204ENST00000413232 TP53INP1Q96A56 240 aa17.61■□□□□ 0.41
CPSF7-204ENST00000413232 NTNG2Q96CW9 530 aa17.61■□□□□ 0.41
CPSF7-204ENST00000413232 GNRHR2Q96P88 292 aa17.61■□□□□ 0.41
CPSF7-204ENST00000413232 FUT8Q9BYC5 575 aa17.61■□□□□ 0.41
CPSF7-204ENST00000413232 OR10A5Q9H207 317 aa17.61■□□□□ 0.41
CPSF7-204ENST00000413232 CDC42EP4Q9H3Q1 356 aaKnown RBP17.61■□□□□ 0.41
CPSF7-204ENST00000413232 QPCTLQ9NXS2 382 aa17.61■□□□□ 0.41
CPSF7-204ENST00000413232 XPR1Q9UBH6 696 aa17.61■□□□□ 0.41
CPSF7-204ENST00000413232 DMGDHQ9UI17 866 aaKnown RBP17.61■□□□□ 0.41
CPSF7-204ENST00000413232 CES1P1Q9UKY3 287 aa17.61■□□□□ 0.41
CPSF7-204ENST00000413232 PCNX3Q9H6A9 2034 aa17.6■□□□□ 0.41
CPSF7-204ENST00000413232 STX16-NPEPL1H3BU86 382 aa17.6■□□□□ 0.41
CPSF7-204ENST00000413232 STX16O14662 325 aa17.6■□□□□ 0.41
CPSF7-204ENST00000413232 TSPAN8P19075 237 aa17.6■□□□□ 0.41
CPSF7-204ENST00000413232 GDF1P27539 372 aa17.6■□□□□ 0.41
CPSF7-204ENST00000413232 DUSP2Q05923 314 aa17.6■□□□□ 0.41
CPSF7-204ENST00000413232 CRYZQ08257 329 aaKnown RBP17.6■□□□□ 0.41
CPSF7-204ENST00000413232 MGAT2Q10469 447 aa17.6■□□□□ 0.41
CPSF7-204ENST00000413232 RPS6KA2Q15349 733 aa17.6■□□□□ 0.41
CPSF7-204ENST00000413232 CES4AQ5XG92 561 aa17.6■□□□□ 0.41
CPSF7-204ENST00000413232 FAM111BQ6SJ93 734 aa17.6■□□□□ 0.41
CPSF7-204ENST00000413232 RELL1Q8IUW5 271 aa17.6■□□□□ 0.41
CPSF7-204ENST00000413232 GALNT12Q8IXK2 581 aa17.6■□□□□ 0.41
CPSF7-204ENST00000413232 TAGAPQ8N103 731 aa17.6■□□□□ 0.41
CPSF7-204ENST00000413232 METTL4Q8N3J2 472 aa17.6■□□□□ 0.41
CPSF7-204ENST00000413232 TMEM151AQ8N4L1 468 aa17.6■□□□□ 0.41
CPSF7-204ENST00000413232 TNIP2Q8NFZ5 429 aa17.6■□□□□ 0.41
CPSF7-204ENST00000413232 OR4F6Q8NGB9 312 aa17.6■□□□□ 0.41
CPSF7-204ENST00000413232 OR4K14Q8NGD5 310 aa17.6■□□□□ 0.41
CPSF7-204ENST00000413232 RILPQ96NA2 401 aa17.6■□□□□ 0.41
CPSF7-204ENST00000413232 TIMP4Q99727 224 aa17.6■□□□□ 0.41
CPSF7-204ENST00000413232 UBQLN3Q9H347 655 aa17.6■□□□□ 0.41
CPSF7-204ENST00000413232 ZNF225Q9UK10 706 aa17.6■□□□□ 0.41
CPSF7-204ENST00000413232 RBP1P09455 135 aa17.59■□□□□ 0.41
CPSF7-204ENST00000413232 CPMP14384 443 aa17.59■□□□□ 0.41
CPSF7-204ENST00000413232 DNAJA1P31689 397 aaKnown RBP17.59■□□□□ 0.41
CPSF7-204ENST00000413232 PHBP35232 272 aa17.59■□□□□ 0.41
CPSF7-204ENST00000413232 CASP3P42574 277 aa17.59■□□□□ 0.41
CPSF7-204ENST00000413232 CDH13P55290 713 aa17.59■□□□□ 0.41
CPSF7-204ENST00000413232 RIPPLY3P57055 190 aa17.59■□□□□ 0.41
CPSF7-204ENST00000413232 GALNT1Q10472 559 aaPredicted RBP17.59■□□□□ 0.41
CPSF7-204ENST00000413232 SLC25A35Q3KQZ1 300 aa17.59■□□□□ 0.41
CPSF7-204ENST00000413232 TMEM198Q66K66 360 aa17.59■□□□□ 0.41
CPSF7-204ENST00000413232 FAM180BQ6P0A1 224 aa17.59■□□□□ 0.41
CPSF7-204ENST00000413232 LETMD1Q6P1Q0 360 aa17.59■□□□□ 0.41
CPSF7-204ENST00000413232 POMZP3Q6PJE2 187 aa17.59■□□□□ 0.41
CPSF7-204ENST00000413232 ARSKQ6UWY0 536 aa17.59■□□□□ 0.41
CPSF7-204ENST00000413232 ZNF597Q96LX8 424 aa17.59■□□□□ 0.41
CPSF7-204ENST00000413232 PAFAH2Q99487 392 aa17.59■□□□□ 0.41
CPSF7-204ENST00000413232 ANGPTL4Q9BY76 406 aa17.59■□□□□ 0.41
CPSF7-204ENST00000413232 NXF5Q9H1B4 397 aaKnown RBP17.59■□□□□ 0.41
CPSF7-204ENST00000413232 LIME1Q9H400 295 aa17.59■□□□□ 0.41
CPSF7-204ENST00000413232 SLC6A5Q9Y345 797 aa17.59■□□□□ 0.41
CPSF7-204ENST00000413232 PCDHGB3Q9Y5G1 929 aa17.59■□□□□ 0.41
CPSF7-204ENST00000413232 ACANP16112 2415 aa17.59■□□□□ 0.41
CPSF7-204ENST00000413232 C15orf38-AP3S2A0A0A6YYH1 394 aa17.58■□□□□ 0.4
CPSF7-204ENST00000413232 TRAPPC6AO75865 159 aa17.58■□□□□ 0.4
CPSF7-204ENST00000413232 RPS17P08708 135 aaKnown RBP17.58■□□□□ 0.4
CPSF7-204ENST00000413232 NT5EP21589 574 aa17.58■□□□□ 0.4
CPSF7-204ENST00000413232 GPX3P22352 226 aa17.58■□□□□ 0.4
CPSF7-204ENST00000413232 ABCD3P28288 659 aa17.58■□□□□ 0.4
CPSF7-204ENST00000413232 EXOSC7Q15024 291 aaKnown RBP17.58■□□□□ 0.4
CPSF7-204ENST00000413232 NNATQ16517 81 aa17.58■□□□□ 0.4
CPSF7-204ENST00000413232 PRICKLE4Q2TBC4 344 aa17.58■□□□□ 0.4
CPSF7-204ENST00000413232 ACSF3Q4G176 576 aaPredicted RBP17.58■□□□□ 0.4
CPSF7-204ENST00000413232 DCST1Q5T197 706 aa17.58■□□□□ 0.4
CPSF7-204ENST00000413232 CCNYL2Q5T2Q4 361 aa17.58■□□□□ 0.4
CPSF7-204ENST00000413232 TTC19Q6DKK2 380 aaPredicted RBP17.58■□□□□ 0.4
CPSF7-204ENST00000413232 COMMD6Q7Z4G1 85 aa17.58■□□□□ 0.4
CPSF7-204ENST00000413232 MILR1Q7Z6M3 343 aa17.58■□□□□ 0.4
CPSF7-204ENST00000413232 ZZZ3Q8IYH5 903 aa17.58■□□□□ 0.4
CPSF7-204ENST00000413232 LIX1Q8N485 282 aa17.58■□□□□ 0.4
CPSF7-204ENST00000413232 UHMK1Q8TAS1 419 aaKnown RBP17.58■□□□□ 0.4
CPSF7-204ENST00000413232 ADAM29Q9UKF5 820 aa17.58■□□□□ 0.4
CPSF7-204ENST00000413232 PCDHA9Q9Y5H5 950 aa17.58■□□□□ 0.4
CPSF7-204ENST00000413232 TP53I11O14683 189 aa17.57■□□□□ 0.4
CPSF7-204ENST00000413232 CTAG2O75638 210 aa17.57■□□□□ 0.4
CPSF7-204ENST00000413232 ZWINTO95229 277 aa17.57■□□□□ 0.4
CPSF7-204ENST00000413232 EPPINO95925 133 aa17.57■□□□□ 0.4
CPSF7-204ENST00000413232 PDYNP01213 254 aa17.57■□□□□ 0.4
CPSF7-204ENST00000413232 HPNP05981 417 aa17.57■□□□□ 0.4
CPSF7-204ENST00000413232 ABCB1P08183 1280 aaPredicted RBP17.57■□□□□ 0.4
CPSF7-204ENST00000413232 INHBAP08476 426 aa17.57■□□□□ 0.4
CPSF7-204ENST00000413232 PORP16435 677 aaPredicted RBP17.57■□□□□ 0.4
CPSF7-204ENST00000413232 ECHS1P30084 290 aa17.57■□□□□ 0.4
CPSF7-204ENST00000413232 CEACAM8P31997 349 aaPredicted RBP17.57■□□□□ 0.4
CPSF7-204ENST00000413232 FEN1P39748 380 aaKnown RBP17.57■□□□□ 0.4
CPSF7-204ENST00000413232 CDK9P50750 372 aaKnown RBP17.57■□□□□ 0.4
CPSF7-204ENST00000413232 ART1P52961 327 aa17.57■□□□□ 0.4
CPSF7-204ENST00000413232 IST1P53990 364 aa17.57■□□□□ 0.4
CPSF7-204ENST00000413232 GGTA1PQ4G0N0 100 aa17.57■□□□□ 0.4
CPSF7-204ENST00000413232 EIPR1Q53HC9 387 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms